mRNA_M-pyrifera_M_contig88881.20623.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.640e-25 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 1 Query: 19 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 +T QL GGEGNLLASAVVT+YATFLCFSAVSKTPTS CNPFVGESN TVVLIG+ LT+LSL W Sbjct: 246 ITALQLLGGEGNLLASAVVTSYATFLCFSAVSKTPTSSCNPFVGESNTTVVLIGIALTVLSLFW 309
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.160e-16 Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 4 LIMKV-VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGES-NLTVVLIGLGLTLLSLIW 210 LIM V +T+ QLSG EGNLL SA+V+ Y TFL FSAVSK P + CNPF+G S NLT +++GL LT LSL+W Sbjct: 237 LIMIVAMTVLQLSGPEGNLLTSALVSVYMTFLGFSAVSKNPDASCNPFIGSSQNLTSIIVGLVLTFLSLLW 307
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9WZ09_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ09_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.230e-15 Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 16 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSL 204 ++T QLSGGEG+LLAS+++T YAT LC+SAVSK P DCNPF+GE + + IG+G T+++L Sbjct: 318 IITGAQLSGGEGSLLASSLITLYATSLCYSAVSKNPDRDCNPFLGEDDFLGIFIGVGFTVVAL 380
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A1E7F563_9STRA (Serinc-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F563_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.990e-15 Identity = 37/67 (55.22%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 4 LIMKVVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSL 204 ++ +VT TQLSG EG+LLAS+++TAYAT LC++AV++ P SDCNP +G + ++IGLGLT++SL Sbjct: 249 ILSLLVTGTQLSGSEGSLLASSLITAYATMLCYNAVTRNPNSDCNPQLGGDDNLSIIIGLGLTIVSL 315
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9WUP5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUP5_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.430e-14 Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 22 TLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 T QLSG EG+LL S+V++ YAT+LCFS VSK P CNP +G +++ ++IGL LT+LSLIW Sbjct: 88 TALQLSGTEGSLLTSSVISLYATYLCFSIVSKNPNGTCNPRLGHNDVWGIIIGLFLTVLSLIW 150
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.610e-14 Identity = 32/65 (49.23%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 16 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 +VT QLSG E +LL SA++ AY+T+LC++AVS+ P +CNP +G+ ++ +++G+GL LLSL W Sbjct: 265 IVTAVQLSGEESSLLTSAIIVAYSTYLCYTAVSRNPNDECNPQLGDEDILGIVLGIGLCLLSLTW 329
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2PAW5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAW5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 6.770e-14 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 4 LIMKV-VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 LIM V +T QLSG +G+LL SA+++AYA +L F+++SK P DCNP +GE+N ++IG+G TL+SL W Sbjct: 263 LIMIVAITGVQLSGEDGSLLTSAIISAYAAYLAFTSMSKNPDGDCNPRLGENNALGIVIGVGFTLISLTW 332
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A1E7FLQ1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ1_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.710e-13 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 19 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 +T QLSG EG+LL S VV+ YA +LCFS +S P DCNP +G +++ + IGL T +SLIW Sbjct: 30 ITAIQLSGTEGSLLTSGVVSIYAIYLCFSIISSNPKGDCNPQLGSNDIWGITIGLLFTTISLIW 93
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7S2R074_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R074_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 8.240e-13 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 16 VVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 VVT+ QLSG EG+L+ SAVV+AY +L F+AVSK P +CNP +G +N+ + GL LT +SL W Sbjct: 253 VVTIIQLSGTEGSLMTSAVVSAYTAYLAFAAVSKNPNGECNPSLGSNNVWSIAAGLILTSISLAW 317
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Match: A0A7R9VDP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VDP0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.680e-12 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 19 VTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNLTVVLIGLGLTLLSLIW 210 +T+ QLSG EG+LL S+V++AY T+L +S VSK P CNP +G ++ + IGL LT +SL W Sbjct: 54 ITVVQLSGTEGSLLTSSVISAYVTYLAYSLVSKNPNGQCNPQLGTNDAWGIAIGLVLTAISLAW 117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88881.20623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88881.20623.1 >prot_M-pyrifera_M_contig88881.20623.1 ID=prot_M-pyrifera_M_contig88881.20623.1|Name=mRNA_M-pyrifera_M_contig88881.20623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp MKVVTLTQLSGGEGNLLASAVVTAYATFLCFSAVSKTPTSDCNPFVGESNback to top mRNA from alignment at M-pyrifera_M_contig88881:519..731- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88881.20623.1 ID=mRNA_M-pyrifera_M_contig88881.20623.1|Name=mRNA_M-pyrifera_M_contig88881.20623.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=213bp|location=Sequence derived from alignment at M-pyrifera_M_contig88881:519..731- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88881:519..731- >mRNA_M-pyrifera_M_contig88881.20623.1 ID=mRNA_M-pyrifera_M_contig88881.20623.1|Name=mRNA_M-pyrifera_M_contig88881.20623.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig88881:519..731- (Macrocystis pyrifera P11B4 male)back to top |