mRNA_M-pyrifera_M_contig8886.20622.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8886.20622.1
Unique NamemRNA_M-pyrifera_M_contig8886.20622.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A6H5JY87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY87_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 8.210e-131
Identity = 197/247 (79.76%), Postives = 218/247 (88.26%), Query Frame = 1
Query:    1 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAK------------MRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTEFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTTEWLELFDLAITGA 705
            QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLV+ LGYP +V GF YDPE F+RGL++DLERGNI+KMDRH+Y+RVAFHGF+KL+SDERKRVYLDG K            + TFTG KYVSMDTLFSLVDAVLYAHLVE+KD+G E +K KSYE+LFRDVRKCVDLCHRDGVIKDRV EDPA+YIIPDP M PMLKR RKEGV VFLLTNSLWDYTHVVMNFL GN++KE+RTTEWL+LFD+AITGA
Sbjct:  195 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFIYDPEHFSRGLVVDLERGNIIKMDRHKYVRVAFHGFKKLKSDERKRVYLDGQKGDVLVVSDCTPQLHTFTGRKYVSMDTLFSLVDAVLYAHLVELKDNGDETLKGKSYERLFRDVRKCVDLCHRDGVIKDRVAEDPAKYIIPDPDMAPMLKRFRKEGV-VFLLTNSLWDYTHVVMNFLCGNSKKENRTTEWLDLFDVAITGA 440          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: D7FMF3_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF3_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 5.070e-130
Identity = 189/237 (79.75%), Postives = 206/237 (86.92%), Query Frame = 1
Query:    1 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTEFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTTEWLELFDLAITGACK 711
            QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLV+ LGYP +V GF YDPE F+RGL+IDLERGN               GF+KL+SDERKRVYLDG K+ TFTG KYVSMDTLFSLVDAVLYAHLVE+KD+G E +K KSYE+LFRDVRKCVDLCHRDGVIKDRV EDPA+YI+PDP M PMLKR RKEGVQVFLLTNSLWDYTHVVMNFL GN++KEDRTTEWL+LFD+AITGACK
Sbjct:  146 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFVYDPEHFSRGLVIDLERGNXXXXXXXXXXXXXXXGFKKLKSDERKRVYLDGQKLHTFTGRKYVSMDTLFSLVDAVLYAHLVELKDNGDETLKGKSYERLFRDVRKCVDLCHRDGVIKDRVAEDPAKYIMPDPDMAPMLKRFRKEGVQVFLLTNSLWDYTHVVMNFLCGNSKKEDRTTEWLDLFDVAITGACK 382          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A835Z4H4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H4_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.390e-103
Identity = 157/244 (64.34%), Postives = 193/244 (79.10%), Query Frame = 1
Query:    1 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMR-TFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTEFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFL--SGNARKE----DRTTEWLELFDLAITGACK 711
            QIKAVGFDMDYTLAQYF AFD LAF+GAKEKLV  LGYP++V  F+YDP +F RGL+ID +RGNI+KMDRH+Y+RVA+HGF+K+ S+ERK +Y     +  +F GS +V+MDTLFSLVD VL+AHLV++KD   + +  + YE+LF DVR+CVDLCHRDGVIKDRV EDPARYI+PD Q++PML+RL+ EG+Q FLLTNSLWDYT VVM+FL   G    E    D    W++LFDL I GACK
Sbjct:   35 QIKAVGFDMDYTLAQYFPAFDLLAFEGAKEKLVHKLGYPSQVLEFDYDPNYFTRGLVIDKQRGNIIKMDRHKYVRVAYHGFQKMSSEERKSMYHASFSLTPSFAGSNFVNMDTLFSLVDCVLFAHLVDLKDKHPDLLP-QPYEKLFSDVRQCVDLCHRDGVIKDRVAEDPARYIMPDTQLLPMLRRLKAEGIQTFLLTNSLWDYTAVVMSFLYEQGGGGSEPGERDDPQGWMDLFDLIIVGACK 277          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A7S3XX48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX48_HETAK)

HSP 1 Score: 300 bits (769), Expect = 1.760e-95
Identity = 143/236 (60.59%), Postives = 188/236 (79.66%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTEFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTTEWLELFDLAITGACK 711
            +KA+GFDMDYTL++Y+  FD LA++GAKEKLV  LGYP EV  + YD +FF RGL+ID + GNILK+DRH+Y R AFHGF +L S++RK  Y  GA M +FT +++V++DT+F+LVDAVL+A LVE+KDS  + V+ KSYE+++ D+R  VD+CHRDGVIK +V EDP RYII DP MV ML+ LR EG +VFL+TNS ++YTHVVMNFL GNA+ E+RT EW+ELFD++   +CK
Sbjct:  102 LKAIGFDMDYTLSRYYQEFDLLAYEGAKEKLVHTLGYPEEVLDYVYDADFFVRGLVIDKKLGNILKIDRHKYCRKAFHGFAELGSNQRKAAYQTGATMPSFTEARFVNVDTIFTLVDAVLFAQLVELKDSDPKAVR-KSYEEIYTDIRHSVDMCHRDGVIKSQVAEDPGRYIIEDPGMVDMLRHLRAEGFKVFLVTNSEYEYTHVVMNFLMGNAKPEERTAEWVELFDVSFCMSCK 336          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A1Z5JYK9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYK9_FISSO)

HSP 1 Score: 279 bits (713), Expect = 1.660e-87
Identity = 142/242 (58.68%), Postives = 179/242 (73.97%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYF-TAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYL-DGAKMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGT-EFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKED---RTTEWLELFDLAITGACK 711
            I+A+GFDMDYTLAQY  T F +LAFDGAK KLV+ LGYP EV  F YDP  + RGLIID +RGN LK+DRH+Y+RVA HGF  + S  RK +Y     K+ +FT  ++V+MDTLF  VDA L+A L+E+KD G  E +  K+YE+++R VR+CVDLCHRDGVIKD+V  +P  Y+I D  MVPML+R R+EG+++FLLTNSLW+YT  VMN+L    R  D   +  EW+ELFDL ITGACK
Sbjct:   95 IQAIGFDMDYTLAQYNETTFAELAFDGAKRKLVESLGYPEEVLDFTYDPAHWVRGLIIDTQRGNFLKIDRHKYVRVARHGFEVISSTTRKHLYSRQFNKVMSFTEKQFVNMDTLFQFVDAHLFASLIELKDKGDYEELDYKTYEEIYRQVRECVDLCHRDGVIKDQVHLNPEPYVIFDKGMVPMLRRFRQEGIKLFLLTNSLWEYTSTVMNYLYHGERVPDERQKDNEWMELFDLVITGACK 336          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: B8BUN7_THAPS (Imp-gmp specific 5' nucleotidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUN7_THAPS)

HSP 1 Score: 275 bits (702), Expect = 8.080e-87
Identity = 136/242 (56.20%), Postives = 178/242 (73.55%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFTA-FDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGA-KMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGT-EFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRT---TEWLELFDLAITGACK 711
            +KAVGFDMDYTL QY    FDQLAFDGAKEKLV  LGYP EV  F YD  ++ RGLIID +RGN LK+DRH+Y+RVA+HGF+ + S+ RK++Y     K+ +FT   +V+MDTLF  VDA L+A LVE+KD G  +F+  K+YE+++R VR+CVDLCHRDGVIKD V  DP +Y++ D  ++PML+  ++ G++VFLLTNS W+YT   MN+L    + +D T    EWLELFDL + G+CK
Sbjct:   15 LKAVGFDMDYTLVQYQQPNFDQLAFDGAKEKLVHSLGYPEEVLNFEYDHTYWVRGLIIDTQRGNFLKIDRHKYVRVAYHGFQPISSNMRKQLYQRTFNKVPSFTEKYFVNMDTLFQHVDAHLFASLVELKDYGEHDFLDGKTYEEIYRQVRECVDLCHRDGVIKDEVARDPDKYLVLDKGLLPMLRGFKENGIKVFLLTNSYWEYTETAMNYLYHERKVDDATLKKNEWLELFDLVVVGSCK 256          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A7S1ZFY4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFY4_TRICV)

HSP 1 Score: 278 bits (711), Expect = 1.030e-86
Identity = 136/242 (56.20%), Postives = 178/242 (73.55%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFTA-FDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGA-KMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGT-EFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRT---TEWLELFDLAITGACK 711
            IKA+GFDMDYTLAQY    FD+LAFDGAK+KLV  LGYP EV  F YD  F+ RGLIID +RGN LK+DRH+Y+R+A+HGF  + S  RK +Y     K+ +FT   +V+MDTLF LVDA L+A L+E+KD G  EF+ +K+Y +++R VR+CVDLCHRDGVIKD V  +P +YI+PDP ++PML+  R+ GV+VFLLTNS W+YT V MNFL    ++        EW++LF++ I G+CK
Sbjct:  142 IKAIGFDMDYTLAQYHQPQFDKLAFDGAKQKLVDALGYPEEVLNFEYDHTFWVRGLIIDTQRGNFLKIDRHKYVRLAYHGFEPISSVTRKHLYNRMFNKVPSFTEKHFVNMDTLFQLVDAHLFASLIEMKDKGEYEFLDEKTYGEIYRQVRECVDLCHRDGVIKDEVARNPEKYIVPDPNLIPMLQSYRESGVKVFLLTNSYWEYTSVAMNFLYHQRKESPEVMVQNEWMDLFNIVIVGSCK 383          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A7S2UFD4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFD4_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.710e-86
Identity = 141/242 (58.26%), Postives = 176/242 (72.73%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFT-AFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGA-KMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGT-EFVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTT---EWLELFDLAITGACK 711
            I+AVGFDMDYTLAQY   AFDQLAFDGAKEKL   LGYP EV  F YD  F+ RGLIID  RGN LK+DRH+Y+R+A+HGF  + S  RK++Y     K+++FT   +V+MDTLF  VDA L+A LVE+KD G  EF+ DK+YE+++R VR C+DLCHRDGVIKD V  +P +YI+ D  ++PMLK  R+EG +VFLLTNS W+YT V MN+L    + +D      EWL+LFD  I GACK
Sbjct:  163 IRAVGFDMDYTLAQYQQPAFDQLAFDGAKEKLFSALGYPKEVLDFKYDHTFWTRGLIIDTIRGNFLKIDRHKYVRLAYHGFTPISSGLRKQIYSRTFNKVQSFTAKSFVNMDTLFQHVDAHLFASLVEMKDQGEHEFLDDKTYEEIYRQVRSCIDLCHRDGVIKDEVALNPEKYIVLDKGLIPMLKGFREEGAKVFLLTNSYWEYTSVAMNYLYHGRKVDDELKSKDEWLDLFDTCIVGACK 404          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A7S0W5J6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W5J6_9CRYP)

HSP 1 Score: 276 bits (706), Expect = 6.400e-86
Identity = 139/241 (57.68%), Postives = 177/241 (73.44%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFT-AFDQLAFDGAKEKLVQGLGYPAEVHGF-NYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTE---FVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTTEWLELFDLAITGACK 711
            I+ VGFDMDYTLAQY    F+ LA  GA  KLV+ + YPAE+    +YDP +F RGLIID  RGNI+KMDRH Y+++AFHG + ++ DER ++Y      ++FT   Y ++DTLFSL DA +YA LV+ KD+  +   F+K +SYEQ+++DVR+ VDLCHRDGVIKDRV EDP RYI  +P +V MLKRL+  G +VFLLTNSLWDYT+VVMN + GN+  E R  EWL+LFDL I GACK
Sbjct:  122 IEFVGFDMDYTLAQYIPETFEILAHRGAMAKLVESMNYPAEILELADYDPTYFQRGLIIDKVRGNIIKMDRHSYVKLAFHGNKMMDRDERTKIY-GNVFQKSFTSKDYANIDTLFSLPDAFMYAQLVDFKDAHEDKYPFLKGRSYEQMYKDVRRSVDLCHRDGVIKDRVSEDPGRYIQSEPGIVDMLKRLKLSGRKVFLLTNSLWDYTNVVMNHICGNSEPESRDLEWLDLFDLVIVGACK 361          
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Match: A0A7S0TFN2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TFN2_HEMAN)

HSP 1 Score: 276 bits (707), Expect = 7.180e-86
Identity = 138/241 (57.26%), Postives = 179/241 (74.27%), Query Frame = 1
Query:    4 IKAVGFDMDYTLAQYFT-AFDQLAFDGAKEKLVQGLGYPAEVHGF-NYDPEFFARGLIIDLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMRTFTGSKYVSMDTLFSLVDAVLYAHLVEVKDSGTE---FVKDKSYEQLFRDVRKCVDLCHRDGVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVMNFLSGNARKEDRTTEWLELFDLAITGACK 711
            I+ VGFDMDYTLAQY    F+ LA  GA  KLV+ + YPAE+    +YDP +F RGLIID  RGNI+KMDRH Y+++AFHG + ++ DER ++Y      ++FT ++Y ++DTLFSL DA +YA LV+ KD+  +    +KDKSYEQ+++DVR+ VDLCHRDGVIKDRV EDP +YI  +P +V MLKRL+  G +VFLLTNSLWDYT+VVMN + GN+  + R  EWL+LFDL I GACK
Sbjct:  134 IQFVGFDMDYTLAQYIPETFEILAHRGAMAKLVESMNYPAEILELADYDPTYFQRGLIIDKMRGNIIKMDRHSYVKLAFHGNKMIDRDERIKIY-GNVFQKSFTSNEYANIDTLFSLPDAFMYAQLVDFKDANEDNYPMLKDKSYEQMYKDVRRSVDLCHRDGVIKDRVSEDPGKYIQAEPGIVDMLKRLKLSGRKVFLLTNSLWDYTNVVMNHICGNSEADTRNLEWLDLFDLVIVGACK 373          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8886.20622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY87_9PHAE8.210e-13179.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMF3_ECTSI5.070e-13079.755'-nucleotidase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835Z4H4_9STRA4.390e-10364.345'-nucleotidase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S3XX48_HETAK1.760e-9560.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5JYK9_FISSO1.660e-8758.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8BUN7_THAPS8.080e-8756.20Imp-gmp specific 5' nucleotidase (Fragment) n=1 Ta... [more]
A0A7S1ZFY4_TRICV1.030e-8656.20Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2UFD4_9STRA1.710e-8658.26Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0W5J6_9CRYP6.400e-8657.68Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0TFN2_HEMAN7.180e-8657.26Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8886contigM-pyrifera_M_contig8886:564..5383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.2
Seed ortholog evalue2.2e-101
Seed eggNOG ortholog2880.D7FMF3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.5'-nucleotidase activity
EggNOG OGsKOG2469@1,KOG2469@2759
Ec32 ortholog description5'-nucleotidase
Ec32 orthologEc-05_000950.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size711
Cds size687
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.768165-CDS-M-pyrifera_M_contig8886:563..6981622816798.768165-CDS-M-pyrifera_M_contig8886:563..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 564..698 -
1692278185.2641804-CDS-M-pyrifera_M_contig8886:563..6981692278185.2641804-CDS-M-pyrifera_M_contig8886:563..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 564..698 -
1622816798.7794645-CDS-M-pyrifera_M_contig8886:1204..12681622816798.7794645-CDS-M-pyrifera_M_contig8886:1204..1268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 1205..1268 -
1692278185.2758296-CDS-M-pyrifera_M_contig8886:1204..12681692278185.2758296-CDS-M-pyrifera_M_contig8886:1204..1268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 1205..1268 -
1622816798.79022-CDS-M-pyrifera_M_contig8886:2549..26441622816798.79022-CDS-M-pyrifera_M_contig8886:2549..2644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 2550..2644 -
1692278185.2849956-CDS-M-pyrifera_M_contig8886:2549..26441692278185.2849956-CDS-M-pyrifera_M_contig8886:2549..2644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 2550..2644 -
1622816798.803457-CDS-M-pyrifera_M_contig8886:3667..37901622816798.803457-CDS-M-pyrifera_M_contig8886:3667..3790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 3668..3790 -
1692278185.2938607-CDS-M-pyrifera_M_contig8886:3667..37901692278185.2938607-CDS-M-pyrifera_M_contig8886:3667..3790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 3668..3790 -
1622816798.8180716-CDS-M-pyrifera_M_contig8886:4412..45191622816798.8180716-CDS-M-pyrifera_M_contig8886:4412..4519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 4413..4519 -
1692278185.3051348-CDS-M-pyrifera_M_contig8886:4412..45191692278185.3051348-CDS-M-pyrifera_M_contig8886:4412..4519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 4413..4519 -
1622816798.8289397-CDS-M-pyrifera_M_contig8886:5196..53591622816798.8289397-CDS-M-pyrifera_M_contig8886:5196..5359Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 5197..5359 -
1692278185.3137352-CDS-M-pyrifera_M_contig8886:5196..53591692278185.3137352-CDS-M-pyrifera_M_contig8886:5196..5359Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8886 5197..5359 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.8413465-UTR-M-pyrifera_M_contig8886:5359..53831622816798.8413465-UTR-M-pyrifera_M_contig8886:5359..5383Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8886 5360..5383 -
1692278185.32268-UTR-M-pyrifera_M_contig8886:5359..53831692278185.32268-UTR-M-pyrifera_M_contig8886:5359..5383Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8886 5360..5383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8886.20622.1prot_M-pyrifera_M_contig8886.20622.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8886 564..5359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8886.20622.1

>prot_M-pyrifera_M_contig8886.20622.1 ID=prot_M-pyrifera_M_contig8886.20622.1|Name=mRNA_M-pyrifera_M_contig8886.20622.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
MDYTLAQYFTAFDQLAFDGAKEKLVQGLGYPAEVHGFNYDPEFFARGLII
DLERGNILKMDRHRYIRVAFHGFRKLESDERKRVYLDGAKMRTFTGSKYV
SMDTLFSLVDAVLYAHLVEVKDSGTEFVKDKSYEQLFRDVRKCVDLCHRD
GVIKDRVEEDPARYIIPDPQMVPMLKRLRKEGVQVFLLTNSLWDYTHVVM
NFLSGNARKEDRTTEWLELFDLAITGACK
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mRNA from alignment at M-pyrifera_M_contig8886:564..5383-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8886.20622.1 ID=mRNA_M-pyrifera_M_contig8886.20622.1|Name=mRNA_M-pyrifera_M_contig8886.20622.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4820bp|location=Sequence derived from alignment at M-pyrifera_M_contig8886:564..5383- (Macrocystis pyrifera P11B4 male)
CAGATTAAGGCCGTTGGGTTCGACATGGACTACACCCTCGCGCAGTATTT CACGGCGTTTGATCAGCTGGCGTTCGACGGGGCTAAGGAGAAGCTTGTCC AGGGCTTGGGCTACCCCGCGGAGGTGCACGGTTTCAACTACGACCCGGAG TTTTTCGCGAGGGGCCTCATCATCGACCTTGAGAGGGGTGAGCGGGGAGT GGCGATCGTGTTGGTGTTGGTGTTGTTGAGCTGGTTTTGGTTGTGTTGTT GTTGATGGTGGTGGTGGTGGTGGTGGTGTTGGTGATGGTGGTTGCTGTGG TGGTGGTGATGTTGGTGGTGTTGGTGGCAGCGGCGGTGGCTGTGGCTGTG GTGGTGGTGGTTGGTGGTGATGGTAGTAGTGGTAGTGGTTGTGGCGGTGG TGACGGTGGGGGTGATCGTGGTAAGTCCGTCACTGATTTTGCTTTGGTGG GTTCATGACCAGCTCCAACACAGTTTACTTTTTTATTTTGGCAGATTTTT CGCCACATGAACCATTTTTTCTTCTTCTCCCCCCGCCGCTCATGGGCAAC GTTTTTGGTCGCTACATAACTAAACCACACCCGCTGGTTTTGATTAGATT GGTGGATCGATATCGAACTCAACCATTGCTCTAATTTTGCGTCCGCCGCA CAAGGGCAACACGAATGGTCGAAAAAAAATGCACCACTGCTTTGATTGTG ATTAGAGGGTCGATAACCAACTCAACCATTGCTCTTCTTCTGCCTCCACC GCATACGGGCAACATGATACGTCGGAAAAAAGCGCACCACTGCTTTTGAT TTGATTGGTGGACCGATAACCAACTCAACCGTTGTGCTCCGCCTGCCCCC GCCGCCGCATGCAGGAAACATCCTCAAGATGGACCGACATAGATATATCC GAGTCGCGTTTCACGGTTTCAGGAAACTTGAGAGCGACGAACGGAAACGC GTGTACTTGGATGGAGCAAAGGTTCGCCCCCCTCGCCGCGCGCAACATCT AACTTTAACACGCAAAGTGGTGATTTTTCTTTAGCAAAACCTCAAGGGAA TTCCTGTTTTGTTTTCAGGTGGTGGGAACGCATGCACACCGTTATTTTTC TTGTGTCACGACTCAACGTTCGCCGTTTCGTTTCGAGTTAAAACCGAACG GGTTTCCCTGTGTTAGCAAGCGGCAGGAACGAACGCACGAACAGGTTTAG CGACAAAACGCATCACGCCGTTTTTTCGGGTAACACCGCGAGGGTTTTCA TTTCGTTTCAGGCAGTGGGTTCGAATTGATTGTACAGTAGTATACGGCAC ACAACAGCGGCCAGTCAATCCTATGATATAAAAATCTGCAAGCTTGTCCC TTTTTTGCTGGCGGTAGGAGCGAACACGCACTCAGACTCACATAAATCGT CGCCATCACTCAAGAAACCGCTCGTTTTTTCCGAGAAAAACCGCAAGCAA GGAGCTTGAACTCTTTTTGCAGGCGGTATACATGCAGTGATTGAAAAAAA AAATCAAGCATCACAACTCCGGGCGCTTTGCCTAGCGGTAGCAGAACACC TTTCACCAAGCGCGTGTAACCTGGTAGTTTTCAATTTTGCCAGATGCGCA CGTTCACCGGGTCCAAGTACGTTTCGATGGACACCCTCTTTTCCTTGGTG GATGCGGTGCTCTATGCCCACCTCGTGGAGGTGAAGGACAGCGGCACGGA GTTCGTCAAGGACAAGGTGAGCGGGGGAGGGGAGAGGAGGAACGGAGGGA GAGAGGGAGGATTTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG GAGGCCGTATTTTGTTGAAGGAGTTAATACTTATTCTGGCGCTTGGCCGC GCTCTCTTCCGTGTGCATCAGCCGCCGTCATCGTTGACGAAACGCGTCCA GCCAAACCACTCCATTGCAAGACGACTGTGAGTTGGCTAGGTGGTTATTT AGTCGCTGACTGTGAATACTTGTTAGTTGGCTGGGTGGCGGTAAGTCGCT GACTGCCAATAGTTAATAGTTGGCTGTGCTACTGTAAGTCGCTGACTAGT AGGAGTTGATAGTTGGCTAGGTGTCGCTGATTGTTATTTGTTACGAGTTG GCTGGGTGGCTATAAGTCGTCGACTATCAGCTGTTTGTAGTTGGCTGGGT GGCTAGAAATCGCTGACTATCAATAGGTATGACTAATAGTTGGATAGTAA TAGGTACTACAGTATCAGTTTGTTGCTTGCGTTGTTTTGCAGAGTTCTGG GTCTCTGTATCTGACTTGGCGCGTTTTTGGTTCGGAATGTGTGCTTATTA AATGGAATTATTAGATGGTTAGTAGGCTTACTTGGCAACCTGACTAAGAA CTATAGTTCGTAACCCGTCAGAGTCCACGCAAGGCATGCCTTACTCACAG GGCCTGTATTTCGTTTCATGTTTTGCGGCTATCGTTTTTGTGTTGTCCAT CCTCTGATTTTCTGCTGTGCAAGGTATCCTTTTTTTTCTTTTTCTTTTTT TTTATTCTGATTATGAAGGGTGTTTTTGTGCTGTCCCGCCTACCAGGTAT ACGTCCGCTCTCTGCCCTTAATTTTTGTTGGATACCGGTGTGTTTTCGTG CTGTACTAAATGTAAGAAGACGCACCCCGCGGTGACCTCCAAGTTTTAGC GCAATCCGTTTGGTTTGTGTTGTGTCGCCCCACCCTACTGCTCTTCTACT CTCTTGTGTTGTGTTACGCCTCGTTTTGCCGGTCTCCAGTCGTACGAGCA GCTCTTCCGGGACGTTAGGAAGTGCGTAGACCTTTGCCACCGAGACGGCG TCATCAAGGACAGGGTGGAAGAAGACCCCGCCAGGTAGATAAGAATTTGT TGTGTCTGTCTTTCTTGCTCGGCGGACTCCGTCAGCACCTTTCTAGCCTC TCTCAGAGCCCCCCGCTTGAACAACGCCTCTGCTCATGTTTGCTTGCCGG CAAGCCATTTTCCTTTTTCCTTCTTCTTGAGAAGATTTGTATTGTCGACG TTTTTTTTTCAGATTTTCTTGCCGTTTTTTTTCAACTCTTCTTCCCTTTT TTTTTCATCATCTTTGGTATTTTCCACTCTTTTTCGAGTGTGTTTGTCTT TTTTGTTTGTTGGATGCTTTGTGCTGTTTTTTTCCGATTTTTATTTTTTT GTTTTGTTTTTCCCGCATGTTTTCTCAAGATTTTTCTTGTGTGGTCTTTT GTTGGTAAATACGGGCAAGTTGCCGTCAAGCATCTACCTGAAAAAACAGA ACAGCACAGCGCAATCAGTCCTGCACAAAGCAGCACACCAAGTGCATGTT GATCAGAGCGTGACAACGCAACCAAGCAGACGGAGTTGCCGAGAGCCAAC ATGTTGCCGAGCATTTACTGTTCGCTGTATTATTAAAAACGCACGGATAC TAAAATCTGCCCCGGCCTACGAAAGTATGTAACCACTCGCAAGCAGCAGC TGTGATTTGCGAAGGATGTGCCTTGAACAATATTTGCAATGGTTCCAACT CAATAAGATACACCATCTATCTTTTTTCTCCCTCCTCCATAATTCGTACA TGCGTGCGGCGTCCGGGTTGGTTTCCTTGAGCATGGAGCTCTTGGCATTT GCAAGCGTCAGTTTGCACCTGAAGTCATGTCAGTTTGCACCTGAAATCAT GGAGGTCTCTGCCCGCGTCGATAACATTTTGTTCTATTTTTCCTTGTGGT CGAGCGTGGCGGGCGGCCGAAGCCGCCTGCGGCGCGAAGCTCCTTGTTTA TCTTATCGCATCTTTCGATGTATCATCCTACATTGTCGATATATATATAT ATACATCGAAAGATAGATTGAGCTATCGAACTTCGATGTATCATACCGGA GTATGTTTGTCGTATCTTTAGTGGATTCTACCCAACCCCAGCCCGACCCA ACCCAACCCAACCCAAATCGAACCAACCCAAACCAACCCAAACCAACCCA ACTCAACCCGACTCAACCCGACACAACCCAACCCAACCCAACCACCCAAC CCAACCCAACCCAACCCAACCCGGCCCAACTCCAGCACAACCCAACCCAA CCCAACCCAACCCACTCCACTCAACGTACCCGAATTGTGCGTCGTTCGTG CGACCTGACGAGCAGGTACATTATCCCGGACCCGCAGATGGTGCCCATGC TCAAGCGTCTCCGAAAGGAGGGGGTGCAGGTGACTGCAGCCATTTTTTCA TGTTCATGTTTTGATGATCGAAAACGACAAAAATATGCCGTCTGCGCTGT TTTGGCAGTTCTCGTGGGACCTCTTGGCGTTGTTGTTGATGGGGGTGGGG GTTACGGGTGGAGGCGGGAGTGGTGGTTATGGCGGTGTTTTTTTTTTGTC GCGATGTTGGTGGTGATTCTGGGGATTCTGATGTCAGTGGTGGTGGTGGT GTTGGTGTTTGTTGTTGTAGTTGTCGTTTGTCGTGTTGTTGTTGTTGTCT TTGACGTCATTGCTGGGGTTGGTGTGGTGTTGGTGTTGTTGTGTTACGGT GGTGGTGTTGGTGGGTGTTCGTGTAGTTGCTGCAAATCGTTTCTGTTTTT TTTTTTTTTGTCATGCAACTTGCTGCGGCTGGTATAGTTTGATGTTTCTT TGGTCGGCGGCGGAATTAACTCTCGTATTTTTTTTTATTTTTTTTTTTTG GTTTTTTGAATCTCGCTACCTACCACCCTCCGAAGGTGTTTCTCCTTACC AACAGCTTGTGGGACTACACGCACGTGGTGATGAACTTTTTAAGCGGGAA CGCTAGGAAGGAGGACCGGACCACGGAGTGGCTTGAGCTGTTCGACCTTG CCATCACCGGGGCTTGTAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8886:564..5383-

>mRNA_M-pyrifera_M_contig8886.20622.1 ID=mRNA_M-pyrifera_M_contig8886.20622.1|Name=mRNA_M-pyrifera_M_contig8886.20622.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig8886:564..5383- (Macrocystis pyrifera P11B4 male)
ATGGACTACACCCTCGCGCAGTATTTCACGGCGTTTGATCAGCTGGCGTT
CGACGGGGCTAAGGAGAAGCTTGTCCAGGGCTTGGGCTACCCCGCGGAGG
TGCACGGTTTCAACTACGACCCGGAGTTTTTCGCGAGGGGCCTCATCATC
GACCTTGAGAGGGATGGACTACACCCTCGCGCAGTATTTCACGGCGTTTG
ATCAGCTGGCGTTCGACGGGGCTAAGGAGAAGCTTGTCCAGGGCTTGGGC
TACCCCGCGGAGGTGCACGGTTTCAACTACGACCCGGAGTTTTTCGCGAG
GGGCCTCATCATCGACCTTGAGAGGGGAAACATCCTCAAGATGGACCGAC
ATAGATATATCCGAGTCGCGTTTCACGGTTTCAGGAAACTTGAGAGCGAC
GAACGGAAACGCGTGTACTTGGATGGAGCAAAGGAAACATCCTCAAGATG
GACCGACATAGATATATCCGAGTCGCGTTTCACGGTTTCAGGAAACTTGA
GAGCGACGAACGGAAACGCGTGTACTTGGATGGAGCAAAGATGCGCACGT
TCACCGGGTCCAAGTACGTTTCGATGGACACCCTCTTTTCCTTGGTGGAT
GCGGTGCTCTATGCCCACCTCGTGGAGGTGAAGGACAGCGGCACGGAGTT
CGTCAAGGACAAGATGCGCACGTTCACCGGGTCCAAGTACGTTTCGATGG
ACACCCTCTTTTCCTTGGTGGATGCGGTGCTCTATGCCCACCTCGTGGAG
GTGAAGGACAGCGGCACGGAGTTCGTCAAGGACAAGTCGTACGAGCAGCT
CTTCCGGGACGTTAGGAAGTGCGTAGACCTTTGCCACCGAGACGGCGTCA
TCAAGGACAGGGTGGAAGAAGACCCCGCCAGTCGTACGAGCAGCTCTTCC
GGGACGTTAGGAAGTGCGTAGACCTTTGCCACCGAGACGGCGTCATCAAG
GACAGGGTGGAAGAAGACCCCGCCAGGTACATTATCCCGGACCCGCAGAT
GGTGCCCATGCTCAAGCGTCTCCGAAAGGAGGGGGTGCAGGTACATTATC
CCGGACCCGCAGATGGTGCCCATGCTCAAGCGTCTCCGAAAGGAGGGGGT
GCAGGTGTTTCTCCTTACCAACAGCTTGTGGGACTACACGCACGTGGTGA
TGAACTTTTTAAGCGGGAACGCTAGGAAGGAGGACCGGACCACGGAGTGG
CTTGAGCTGTTCGACCTTGCCATCACCGGGGCTTGTAAGGTGTTTCTCCT
TACCAACAGCTTGTGGGACTACACGCACGTGGTGATGAACTTTTTAAGCG
GGAACGCTAGGAAGGAGGACCGGACCACGGAGTGGCTTGAGCTGTTCGAC
CTTGCCATCACCGGGGCTTGTAAG
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