mRNA_M-pyrifera_M_contig88847.20619.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88847.20619.1
Unique NamemRNA_M-pyrifera_M_contig88847.20619.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A2D9CGC2_9BACT (Elongation factor Tu n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CGC2_9BACT)

HSP 1 Score: 489 bits (1260), Expect = 5.430e-172
Identity = 246/271 (90.77%), Postives = 260/271 (95.94%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETE RHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDD+ELLDLVEMEIRELLDKY+FPGDDTP++RGQSKLALENP+DDAAC PIDELF+TIDSYIPEP RE DKP+LISVEDVFSIKGRGTVATGRVERGVVKVGD AE+VGLAK+N  TT+TGVEMF K+L +G+AGDN G+LLRGVEKNDI RGQ
Sbjct:   27 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETETRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDEELLDLVEMEIRELLDKYEFPGDDTPVIRGQSKLALENPSDDAACAPIDELFDTIDSYIPEPTREDDKPFLISVEDVFSIKGRGTVATGRVERGVVKVGDAAEIVGLAKDNQNTTITGVEMFQKTLSEGRAGDNCGVLLRGVEKNDISRGQ 297          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A3M2CSE5_9BACT (Elongation factor Tu n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CSE5_9BACT)

HSP 1 Score: 476 bits (1224), Expect = 1.630e-166
Identity = 237/271 (87.45%), Postives = 256/271 (94.46%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAAMVARADAKGLVQGAK+YAEITKGGTVRD+NKTVTIHS+HVEYETE RHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVP+IVVFMNKVDLVDD ELLDLVEMEIRELL+KYDFPGDDTPI+RGQ+K ALENP DDA C PIDELFNTID+YIPEP RE DKP+LISVEDVFSIKGRGTVATGRVERG VKVGD AE+VGL+KENL+TT+TGVEMFNK+L+   AGDN G+LLRG+EKN ++RGQ
Sbjct:   27 TLTAAMVARADAKGLVQGAKTYAEITKGGTVRDANKTVTIHSSHVEYETETRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPHIVVFMNKVDLVDDPELLDLVEMEIRELLNKYDFPGDDTPIIRGQAKAALENPKDDAICAPIDELFNTIDTYIPEPEREVDKPFLISVEDVFSIKGRGTVATGRVERGQVKVGDAAEIVGLSKENLSTTITGVEMFNKTLESAIAGDNCGVLLRGIEKNQVERGQ 297          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A6M8W3B5_9BACT (Elongation factor Tu n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W3B5_9BACT)

HSP 1 Score: 464 bits (1194), Expect = 5.730e-162
Identity = 233/271 (85.98%), Postives = 256/271 (94.46%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+VARA AKGL +G KSYAEITKGGTVRDSNKTVTIHS+HVEYET  RHYAHVDCPGHADF+KNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVP++VVFMNKVDLVDD+EL++LVEMEIR+LL KYDFPGDDTPIV+GQSK ALENP DDA C PIDELF+ +DSYIPEPPRE DKPYL+SVEDVFSIKGRGTVATGR+ERGV+KVGD AE+VGLA E+++TTVTGVEMFNK+LDQGQAGDNVG+LLRGVEK+ IQRGQ
Sbjct:   27 TLTAALVARAAAKGLSEG-KSYAEITKGGTVRDSNKTVTIHSSHVEYETAERHYAHVDCPGHADFIKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPHMVVFMNKVDLVDDEELIELVEMEIRDLLSKYDFPGDDTPIVKGQSKAALENPGDDAICKPIDELFDALDSYIPEPPREVDKPYLMSVEDVFSIKGRGTVATGRIERGVMKVGDAAEIVGLADESMSTTVTGVEMFNKTLDQGQAGDNVGVLLRGVEKDMIQRGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A3M8FRH3_9BACT (Elongation factor Tu n=3 Tax=Phycisphaerales TaxID=666506 RepID=A0A3M8FRH3_9BACT)

HSP 1 Score: 461 bits (1186), Expect = 7.930e-161
Identity = 233/271 (85.98%), Postives = 252/271 (92.99%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+VARA AKGL + AKSYA+ITKGGTVRDSNKTVTIHS+HVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDD EL DLVEMEIRELLDKY+FPGDDTPI+RGQSK ALENP DD  C P+DELF+ +DSYIPEP RE DKPYL++VEDVFSIKGRGTVATGR+ERGVVKVGD AE+VGL +EN+ TTVTGVEMF K+LD+G+AGDNVGILLRGVEK+ I RGQ
Sbjct:   27 TLTAALVARAAAKGLSE-AKSYADITKGGTVRDSNKTVTIHSSHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDPELADLVEMEIRELLDKYEFPGDDTPIIRGQSKAALENPGDDDICKPLDELFDALDSYIPEPAREDDKPYLVAVEDVFSIKGRGTVATGRIERGVVKVGDEAEIVGLMRENVKTTVTGVEMFQKTLDEGRAGDNVGILLRGVEKDGISRGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A6N2E7U8_9BACT (Elongation factor Tu n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2E7U8_9BACT)

HSP 1 Score: 449 bits (1155), Expect = 3.960e-156
Identity = 223/271 (82.29%), Postives = 250/271 (92.25%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+VARA AKGL + AKSYAEITKGGTVRD+NKTVTIHS+HVEYETE RHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNK+DLVDD+EL++LVEMEIRELLDKYDFPGDDTP+V+GQ+  ALENP DDA C PIDELF  IDSYIPEP RE DKP+L++VEDVFSIKGRGTVATGR+ERGV+KVGD  E++GLA++   +T+TGVEMF K+LDQG AGDNVG+L+RGVEK +I+RGQ
Sbjct:   27 TLTAALVARAAAKGLGE-AKSYAEITKGGTVRDANKTVTIHSSHVEYETENRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKIDLVDDEELIELVEMEIRELLDKYDFPGDDTPVVKGQAHAALENPGDDAICKPIDELFEAIDSYIPEPEREQDKPFLMAVEDVFSIKGRGTVATGRIERGVIKVGDECEIIGLARDTKKSTITGVEMFQKTLDQGIAGDNVGLLVRGVEKKEIERGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A3B1E5P9_9ZZZZ (Translation elongation factor Tu n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1E5P9_9ZZZZ)

HSP 1 Score: 449 bits (1155), Expect = 4.880e-156
Identity = 227/271 (83.76%), Postives = 252/271 (92.99%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAAMVARA A+G  + AKSYAEITKGGTVRDSNKTVTIH++HVEYETE RHYAHVDCPGHADF+KNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVP++VVFMNKVDLVDD ELL+LVEMEIR+LL+KYDFPGDDTPI++GQSK ALE+P+ +    PIDELFN +D++IPEPPRE DKPYL+SVEDVFSIKGRGTVATGR+ERGV+KVGDPAE+VGL  E+  T VTGVEMFNK+LDQGQAGDNVGILLRGVEKNDI+RGQ
Sbjct:   27 TLTAAMVARAAAQGRGE-AKSYAEITKGGTVRDSNKTVTIHASHVEYETELRHYAHVDCPGHADFIKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPHMVVFMNKVDLVDDPELLELVEMEIRDLLNKYDFPGDDTPIIQGQSKAALEDPSSEEHGKPIDELFNALDTFIPEPPREVDKPYLMSVEDVFSIKGRGTVATGRIERGVMKVGDPAEIVGLTNESHKTVVTGVEMFNKTLDQGQAGDNVGILLRGVEKNDIERGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A7D8UGN0_9BACT (Elongation factor Tu n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UGN0_9BACT)

HSP 1 Score: 448 bits (1152), Expect = 1.170e-155
Identity = 223/271 (82.29%), Postives = 248/271 (91.51%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+VARA AKGL + AKSYA+ITKGGTVRDSNKTVTIH++HVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDD EL++LVEMEIRELLDKY+FPGDDTP+++GQSK ALENP+DD  C PIDELF  +DSYIPEP RE DKP+L+++EDVFSIKGRGTVATGR+ERG+ KVGD  E+VGL+K N  T +TGVEMF K+LDQG AGDNVG LLRGVEK +I+RGQ
Sbjct:   27 TLTAALVARAAAKGLGE-AKSYADITKGGTVRDSNKTVTIHASHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDPELIELVEMEIRELLDKYEFPGDDTPVIKGQSKAALENPSDDTICAPIDELFGALDSYIPEPAREQDKPFLMAIEDVFSIKGRGTVATGRIERGICKVGDEVEIVGLSKVNKKTIMTGVEMFQKTLDQGIAGDNVGCLLRGVEKEEIERGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A7C5SH70_9BACT (Elongation factor Tu n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5SH70_9BACT)

HSP 1 Score: 427 bits (1098), Expect = 1.890e-147
Identity = 212/271 (78.23%), Postives = 241/271 (88.93%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+ AR+ ++      KSYA+ITKGGTVRD+NKTVTI S+H EYETE RHYAHVDCPGHADFVKNMITGAAQMDGAILVV A SGPMPQTREHVLLARQVGVP++VVFMNK+DLVDD+EL +LVEMEIRELL KY+FPGDD P++RG +  ALENP DD  C PIDEL + +D+YIPEP RE DKP+L+SVEDVFSIKGRGTVATGR+ERGVVKVGDPAE+VGL +E L+TTVTGVEMFNK+LD+GQAGDNVGILLRG+EKN +QRGQ
Sbjct:   27 TLTAALSARSASR-FGGEVKSYADITKGGTVRDANKTVTIASSHTEYETEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVDAASGPMPQTREHVLLARQVGVPHLVVFMNKIDLVDDEELAELVEMEIRELLSKYEFPGDDVPVIRGSASAALENPQDDEVCKPIDELLDALDNYIPEPEREIDKPFLVSVEDVFSIKGRGTVATGRIERGVVKVGDPAEIVGLNRETLSTTVTGVEMFNKTLDEGQAGDNVGILLRGIEKNQVQRGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A3M2BJ57_9BACT (Elongation factor Tu n=2 Tax=Bacteria TaxID=2 RepID=A0A3M2BJ57_9BACT)

HSP 1 Score: 427 bits (1098), Expect = 1.890e-147
Identity = 210/271 (77.49%), Postives = 242/271 (89.30%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+ AR+  +      K+YAEITKGGTVRD+NKTVTI S+H EYETE RHYAHVDCPGHADFVKNMITGAAQMDGAILVV+A  GPMPQTREHVLLARQVGVP+IVVFMNKVDLVDD ELLDLVEME+R+LL+KY+FPGD+ P++RGQ+  A+ENP DD  C PIDELF  +D+YIPEP RE DKP+L+SVEDVFSIKGRGTVATGR+ERGVVKVGD AE+VGLA+E+  TT+TGVEMFNK+LDQGQAGDNVG+LLRG+EKN+++RGQ
Sbjct:   27 TLTAALSARSAVR-FGGEVKTYAEITKGGTVRDANKTVTIASSHTEYETEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVGVPHIVVFMNKVDLVDDPELLDLVEMEVRDLLNKYEFPGDEVPVIRGQANAAIENPNDDEICKPIDELFEALDTYIPEPEREIDKPFLVSVEDVFSIKGRGTVATGRIERGVVKVGDAAEIVGLARESKTTTITGVEMFNKTLDQGQAGDNVGVLLRGIEKNEVERGQ 296          
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Match: A0A4P5X9X5_9BACT (Elongation factor Tu n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A4P5X9X5_9BACT)

HSP 1 Score: 425 bits (1093), Expect = 1.090e-146
Identity = 212/271 (78.23%), Postives = 239/271 (88.19%), Query Frame = 1
Query:    1 TLTAAMVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGVPYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLALENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGTVATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNVGILLRGVEKNDIQRGQ 813
            TLTAA+ AR+  K   Q  K+YAEITKGGTVRD+NKTVTI S+H EYET+ RHYAHVDCPGHADFVKNMITGAAQMDGAILVV+A  GPMPQTREHVLLARQVGVP+IVVF+NKVDLVDD ELLDLVE+E+RELL KY FPGDDTP++RGQSKLALENP+DD AC PID+LF+ ID YIPEP RE DKP+L+SVEDVFSIKGRGTVATGR+ERGV+KVGD  E+VGL  ENL + +TGVEMF K+LD GQAGDNVG+LLRG+EK  I+RGQ
Sbjct:   27 TLTAALSARSAVKN-GQKPKTYAEITKGGTVRDANKTVTIASSHTEYETKNRHYAHVDCPGHADFVKNMITGAAQMDGAILVVSAADGPMPQTREHVLLARQVGVPHIVVFLNKVDLVDDPELLDLVELEVRELLKKYGFPGDDTPVIRGQSKLALENPSDDKACKPIDDLFDAIDKYIPEPAREVDKPFLMSVEDVFSIKGRGTVATGRIERGVIKVGDAVEIVGLTAENLKSVITGVEMFQKTLDSGQAGDNVGVLLRGLEKTQIERGQ 296          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88847.20619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9CGC2_9BACT5.430e-17290.77Elongation factor Tu n=2 Tax=Phycisphaerae TaxID=6... [more]
A0A3M2CSE5_9BACT1.630e-16687.45Elongation factor Tu n=1 Tax=Planctomycetes bacter... [more]
A0A6M8W3B5_9BACT5.730e-16285.98Elongation factor Tu n=1 Tax=Planctomycetes bacter... [more]
A0A3M8FRH3_9BACT7.930e-16185.98Elongation factor Tu n=3 Tax=Phycisphaerales TaxID... [more]
A0A6N2E7U8_9BACT3.960e-15682.29Elongation factor Tu n=1 Tax=Phycisphaerales bacte... [more]
A0A3B1E5P9_9ZZZZ4.880e-15683.76Translation elongation factor Tu n=1 Tax=hydrother... [more]
A0A7D8UGN0_9BACT1.170e-15582.29Elongation factor Tu n=1 Tax=Phycisphaerales bacte... [more]
A0A7C5SH70_9BACT1.890e-14778.23Elongation factor Tu n=1 Tax=Phycisphaerales bacte... [more]
A0A3M2BJ57_9BACT1.890e-14777.49Elongation factor Tu n=2 Tax=Bacteria TaxID=2 RepI... [more]
A0A4P5X9X5_9BACT1.090e-14678.23Elongation factor Tu n=1 Tax=Phycisphaerae bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88847contigM-pyrifera_M_contig88847:1..813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score380.2
Seed ortholog evalue8e-103
Seed eggNOG ortholog1123508.JH636441_gene3339
Preferred nametuf
KEGG koko:K02358
Hectar predicted targeting categoryother localisation
EggNOG free text desc.This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EggNOG OGs2IXC2@203682,COG0050@1,COG0050@2
COG Functional cat.J
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029,ko04147
Exons1
Model size813
Cds size798
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.512143-CDS-M-pyrifera_M_contig88847:0..7981622816798.512143-CDS-M-pyrifera_M_contig88847:0..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88847 1..798 -
1692278185.086976-CDS-M-pyrifera_M_contig88847:0..7981692278185.086976-CDS-M-pyrifera_M_contig88847:0..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88847 1..798 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.5236607-UTR-M-pyrifera_M_contig88847:798..8131622816798.5236607-UTR-M-pyrifera_M_contig88847:798..813Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88847 799..813 -
1692278185.0997872-UTR-M-pyrifera_M_contig88847:798..8131692278185.0997872-UTR-M-pyrifera_M_contig88847:798..813Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88847 799..813 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88847.20619.1prot_M-pyrifera_M_contig88847.20619.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88847 1..798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88847.20619.1

>prot_M-pyrifera_M_contig88847.20619.1 ID=prot_M-pyrifera_M_contig88847.20619.1|Name=mRNA_M-pyrifera_M_contig88847.20619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
MVARADAKGLVQGAKSYAEITKGGTVRDSNKTVTIHSAHVEYETEGRHYA
HVDCPGHADFVKNMITGAAQMDGAILVVAADSGPMPQTREHVLLARQVGV
PYIVVFMNKVDLVDDDELLDLVEMEIRELLDKYDFPGDDTPIVRGQSKLA
LENPTDDAACGPIDELFNTIDSYIPEPPRETDKPYLISVEDVFSIKGRGT
VATGRVERGVVKVGDPAEVVGLAKENLATTVTGVEMFNKSLDQGQAGDNV
GILLRGVEKNDIQRGQ
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mRNA from alignment at M-pyrifera_M_contig88847:1..813-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88847.20619.1 ID=mRNA_M-pyrifera_M_contig88847.20619.1|Name=mRNA_M-pyrifera_M_contig88847.20619.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig88847:1..813- (Macrocystis pyrifera P11B4 male)
ACCCTGACCGCGGCCATGGTTGCTCGTGCGGATGCCAAGGGTCTGGTCCA GGGTGCGAAGTCGTACGCGGAAATCACCAAGGGTGGTACTGTGCGTGACT CGAACAAGACGGTGACCATCCACTCTGCTCATGTTGAGTACGAGACAGAG GGTCGTCATTACGCACACGTGGATTGCCCGGGTCACGCGGACTTCGTGAA GAACATGATTACGGGTGCGGCACAGATGGACGGCGCGATCCTCGTGGTAG CTGCCGACTCGGGCCCGATGCCCCAGACGCGTGAGCACGTGCTTCTCGCA CGCCAGGTGGGTGTGCCCTACATTGTCGTCTTCATGAACAAGGTTGACCT TGTCGACGACGACGAGCTCCTCGATCTCGTCGAGATGGAGATCCGCGAGT TGCTCGACAAGTACGATTTCCCGGGTGACGACACCCCGATCGTTCGTGGT CAGTCCAAGCTCGCGCTTGAGAACCCAACAGACGACGCGGCGTGTGGCCC GATCGATGAGCTGTTCAACACCATCGATTCCTACATCCCCGAGCCCCCAC GCGAGACCGACAAGCCTTACCTCATCTCCGTCGAGGACGTGTTCTCGATC AAGGGTCGTGGTACGGTTGCAACGGGTCGCGTGGAGCGCGGCGTGGTCAA GGTCGGCGATCCCGCAGAGGTTGTTGGTCTTGCCAAGGAGAACCTCGCGA CGACCGTTACGGGTGTCGAGATGTTCAACAAGTCACTCGATCAGGGGCAG GCGGGCGACAACGTCGGTATCCTCCTGCGTGGTGTGGAGAAGAACGACAT CCAGCGCGGGCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88847:1..813-

>mRNA_M-pyrifera_M_contig88847.20619.1 ID=mRNA_M-pyrifera_M_contig88847.20619.1|Name=mRNA_M-pyrifera_M_contig88847.20619.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig88847:1..813- (Macrocystis pyrifera P11B4 male)
ATGGTTGCTCGTGCGGATGCCAAGGGTCTGGTCCAGGGTGCGAAGTCGTA
CGCGGAAATCACCAAGGGTGGTACTGTGCGTGACTCGAACAAGACGGTGA
CCATCCACTCTGCTCATGTTGAGTACGAGACAGAGGGTCGTCATTACGCA
CACGTGGATTGCCCGGGTCACGCGGACTTCGTGAAGAACATGATTACGGG
TGCGGCACAGATGGACGGCGCGATCCTCGTGGTAGCTGCCGACTCGGGCC
CGATGCCCCAGACGCGTGAGCACGTGCTTCTCGCACGCCAGGTGGGTGTG
CCCTACATTGTCGTCTTCATGAACAAGGTTGACCTTGTCGACGACGACGA
GCTCCTCGATCTCGTCGAGATGGAGATCCGCGAGTTGCTCGACAAGTACG
ATTTCCCGGGTGACGACACCCCGATCGTTCGTGGTCAGTCCAAGCTCGCG
CTTGAGAACCCAACAGACGACGCGGCGTGTGGCCCGATCGATGAGCTGTT
CAACACCATCGATTCCTACATCCCCGAGCCCCCACGCGAGACCGACAAGC
CTTACCTCATCTCCGTCGAGGACGTGTTCTCGATCAAGGGTCGTGGTACG
GTTGCAACGGGTCGCGTGGAGCGCGGCGTGGTCAAGGTCGGCGATCCCGC
AGAGGTTGTTGGTCTTGCCAAGGAGAACCTCGCGACGACCGTTACGGGTG
TCGAGATGTTCAACAAGTCACTCGATCAGGGGCAGGCGGGCGACAACGTC
GGTATCCTCCTGCGTGGTGTGGAGAAGAACGACATCCAGCGCGGGCAGAT
GGTTGCTCGTGCGGATGCCAAGGGTCTGGTCCAGGGTGCGAAGTCGTACG
CGGAAATCACCAAGGGTGGTACTGTGCGTGACTCGAACAAGACGGTGACC
ATCCACTCTGCTCATGTTGAGTACGAGACAGAGGGTCGTCATTACGCACA
CGTGGATTGCCCGGGTCACGCGGACTTCGTGAAGAACATGATTACGGGTG
CGGCACAGATGGACGGCGCGATCCTCGTGGTAGCTGCCGACTCGGGCCCG
ATGCCCCAGACGCGTGAGCACGTGCTTCTCGCACGCCAGGTGGGTGTGCC
CTACATTGTCGTCTTCATGAACAAGGTTGACCTTGTCGACGACGACGAGC
TCCTCGATCTCGTCGAGATGGAGATCCGCGAGTTGCTCGACAAGTACGAT
TTCCCGGGTGACGACACCCCGATCGTTCGTGGTCAGTCCAAGCTCGCGCT
TGAGAACCCAACAGACGACGCGGCGTGTGGCCCGATCGATGAGCTGTTCA
ACACCATCGATTCCTACATCCCCGAGCCCCCACGCGAGACCGACAAGCCT
TACCTCATCTCCGTCGAGGACGTGTTCTCGATCAAGGGTCGTGGTACGGT
TGCAACGGGTCGCGTGGAGCGCGGCGTGGTCAAGGTCGGCGATCCCGCAG
AGGTTGTTGGTCTTGCCAAGGAGAACCTCGCGACGACCGTTACGGGTGTC
GAGATGTTCAACAAGTCACTCGATCAGGGGCAGGCGGGCGACAACGTCGG
TATCCTCCTGCGTGGTGTGGAGAAGAACGACATCCAGCGCGGGCAG
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