mRNA_M-pyrifera_M_contig88827.20613.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88827.20613.1
Unique NamemRNA_M-pyrifera_M_contig88827.20613.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A2D8CJD5_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CJD5_9BACT)

HSP 1 Score: 340 bits (872), Expect = 5.310e-104
Identity = 160/270 (59.26%), Postives = 211/270 (78.15%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            ++FN++VFNDFL+K YL  L+G LNAD+++EGTT  + PKG+ RL N ++SVPIAGI L GI S++ F QSGL + +++A+SG GSF+A+G I LEGIVP  +D+TAKA++FRLANT DYN+ IDL+ KLTGK   PKA+G+L V+NGFV+LQDFGE ++E ++L+GEE SSFS YDSLA++M F I+R+F +RN  YLD+EI L G LDAQK+   DL LFG L   +GYVRPLGK F ++E  FTFSGPVE P++ IK+ Y P + QK
Sbjct: 1089 DNFNLSVFNDFLDKQYLNRLRGVLNADINIEGTTNTLTPKGYFRLQNGQISVPIAGIKLTGITSELNFSQSGLQLSQLSARSGSGSFSASGNIDLEGIVPTNLDITAKANRFRLANTSDYNLTIDLDSKLTGKPTQPKASGELRVKNGFVFLQDFGEKSVETIELEGEETSSFSAYDSLAMDMRFVIERNFLIRNSRYLDLEIALTGELDAQKQRSEDLQLFGTLDAQRGYVRPLGKQFTLDEGTFTFSGPVEEPDLFIKTSYVPQSSQK 1358          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A3D1G8C1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G8C1_9BACT)

HSP 1 Score: 336 bits (861), Expect = 2.530e-103
Identity = 160/270 (59.26%), Postives = 212/270 (78.52%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            ED N+AVF+DFL+++YL  LKG+LNAD+++EG    + P GF+ L +  V VP AGITL  I +DI    + + V +++  SG+G F  +GT+ L G +P  +D+ A A+QF+LANT+DYN+VIDLN +LTG A TPKA+G +TV+NGFVYLQ+FG+ T+EDVQL+GEE +SFS YDSL+++M   I+R+FYVRNRTYLDME+EL GSLDAQK+T G+L LFG+L G+ GYV+PLGK F M+E+ FTFSGPV+ PEI +KS YTPPTRQK
Sbjct:  846 EDLNLAVFDDFLDENYLNNLKGSLNADITIEGNPGNLQPDGFINLHSGSVEVPPAGITLSRINADIVLEGNEIKVNKLSTFSGKGEFKLSGTVGLNGFLPGAVDMKATANQFKLANTNDYNMVIDLNTRLTGPATTPKASGSVTVKNGFVYLQNFGDKTVEDVQLEGEEEASFSAYDSLSMDMQINIERNFYVRNRTYLDMELELNGSLDAQKQTNGELELFGSLEGLGGYVQPLGKRFEMQESGFTFSGPVDEPEIYVKSMYTPPTRQK 1115          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A1B6Y8U8_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y8U8_9BACT)

HSP 1 Score: 336 bits (861), Expect = 1.760e-102
Identity = 156/268 (58.21%), Postives = 212/268 (79.10%), Query Frame = 1
Query:    4 DFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQ 807
            +FN+AVFNDF+NK+Y + LKG+LN +LSL+GT +++   G+  L+      PIAGI +DGIKS IEF +  + +K+++AKSG+GSFNANG I L+G+ P T+D+ AKA+QF+LANTD+YN+V+DL+ +L+G   TPKATG+  V+NGF+ L DFG+ T+EDV L+GEE ++ S YDSL+IEM F I+R+F+VRNR YLD+EIE+ G LDAQKET+GDLSLFG+LRG  GYVRPLGK F +EEA   FSGP  NP++++KS Y P +R+
Sbjct: 1085 NFNLAVFNDFVNKEYTKNLKGSLNGELSLKGTEDEITTNGYFDLTKTSFESPIAGIKVDGIKSRIEFSKDKISLKQLSAKSGKGSFNANGIIALDGLYPTTLDIEAKANQFKLANTDEYNLVVDLDSRLSGPVSTPKATGRFAVKNGFIVLDDFGDKTVEDVTLEGEEATNVSYYDSLSIEMEFAIERNFFVRNRRYLDLEIEIEGDLDAQKETKGDLSLFGSLRGTSGYVRPLGKRFELEEAELIFSGPPANPDLNVKSAYVPISRK 1352          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A3M8G179_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G179_9BACT)

HSP 1 Score: 335 bits (859), Expect = 3.090e-102
Identity = 161/268 (60.07%), Postives = 210/268 (78.36%), Query Frame = 1
Query:    7 FNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            FN+AVFNDFL+K YLR L G L+AD+SL+GT E ++P G+LRLSN++V VP AGITL  I+S++EF Q+GL+V E   KSG G+ +A+G I LEGI P+ +DL   A++ +LANT +YN++IDL+ +LTGKA  P A+G++TV+NGF  LQ FGEN++E+V L+GEE SSFSPYDSL+I+M  EI+RDFYVRN  Y DMEIE+ G+LDA K T  + SLFG L G +GY+RPLGK F  EEA F FSGPV++PE+ ++ KY PPTRQK
Sbjct: 1078 FNLAVFNDFLDKRYLRDLTGRLDADISLQGTRENLLPSGYLRLSNSEVDVPKAGITLTDIRSNLEFAQNGLVVNEFQMKSGGGNLSADGIISLEGIYPEALDLNISATRLKLANTSNYNMIIDLSSELTGKATNPVASGEITVKNGFFRLQGFGENSVEEVILEGEEASSFSPYDSLSIDMVIEIERDFYVRNANYPDMEIEVRGNLDAHKTTNEEFSLFGTLEGTKGYIRPLGKLFTTEEARFIFSGPVDDPELFVRGKYIPPTRQK 1345          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A521BYG3_9BACT (Uncharacterized protein n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521BYG3_9BACT)

HSP 1 Score: 330 bits (846), Expect = 2.090e-100
Identity = 152/270 (56.30%), Postives = 211/270 (78.15%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            + FNI+VFNDFL+K Y+R LKG +NAD+ + GT E++VP G+ RL+N++V+VPIAGI L  I++D+ F +SG+ +  ++AKSG G+FNA G I+L GI P ++++ AKA++F+LANT DYN+ IDL+ +L+G    P+A+G LT++NGF+YLQDFGE ++E V+L+ EE SSFSPYDSLAI+M F I+R+F+VRN  YLDMEIEL GSL+AQK    +L LFG L G  GY RPLGK F +EEA+F FSGPV+ P+++I++ Y P + QK
Sbjct: 1083 DQFNISVFNDFLDKQYMRNLKGMVNADVDITGTPEQLVPSGYFRLNNSEVTVPIAGIRLSNIRADLSFTESGMRLNRLSAKSGSGNFNATGDIELNGITPSSLNINAKATRFKLANTADYNLTIDLDSRLSGTPMQPEASGSLTIKNGFIYLQDFGEESVEVVELEEEETSSFSPYDSLAIDMRFSIERNFFVRNSRYLDMEIELDGSLEAQKSRNQELQLFGTLNGEDGYARPLGKLFELEEASFRFSGPVDRPDLNIRTSYIPQSSQK 1352          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: UPI000CD8A314 (translocation/assembly module TamB domain-containing protein n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD8A314)

HSP 1 Score: 329 bits (844), Expect = 4.080e-100
Identity = 154/271 (56.83%), Postives = 213/271 (78.60%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSG-LMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            ++FN++VFNDFL++ + R L+GTLNA++ + GT   + PKGFLRL   +VSVP+AGITL  I+S+IEF++ G L +      SG G F+A+G+I+L+GI PK ++L A+A++FRLANTDDYN+ IDLN  L+G    PKA+G LT++NGFV+LQ+FGE ++EDVQL+ EE +SFSPYDSLA++M F I+RDF++RNR YLDM+IEL G L+AQK+T G+L LFG+L   +GYVRPLGK FN+E+ +FTFSGP+ NP+I + + Y P + QK
Sbjct: 1086 DNFNLSVFNDFLDQQFTRNLRGTLNANVQINGTKTTLAPKGFLRLEEGRVSVPVAGITLTDIQSEIEFMEDGHLNLNRFNMNSGSGGFSASGSIELDGITPKNLNLNARANRFRLANTDDYNLTIDLNSDLSGDPVRPKASGSLTIKNGFVFLQNFGEKSVEDVQLEEEEKASFSPYDSLAMDMTFVIERDFFIRNRRYLDMQIELNGELEAQKQTGGELQLFGSLDANEGYVRPLGKQFNLEDGSFTFSGPLTNPDIYVNTSYVPQSAQK 1356          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A3F3I4L5_9BACT (Uncharacterized protein n=8 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I4L5_9BACT)

HSP 1 Score: 327 bits (837), Expect = 3.710e-99
Identity = 156/269 (57.99%), Postives = 210/269 (78.07%), Query Frame = 1
Query:    4 DFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEE-LSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQ 807
            DFN+AVFNDF+NK++ R LKG LN +LSL+GT +++   G+  L+ +    PIAGI +DGIKS IEF +  + +K+++A SG+G FNANGTI L+G+ P T+D+ AKA+QF+LANTD+YN+VIDL+ +L+G   TPKATG+  V+NGF+ L++FG+ T+EDV L+GEE + + S YDSLAIEM F I+R+FYVR   YLDMEIE+ G LDAQK+T G+LSLFG+LRG  GYVRPLGK F +EEA   FSGP E+P+++IKS Y P +R+
Sbjct: 1085 DFNLAVFNDFVNKEFTRNLKGVLNGELSLKGTEDEITATGYFDLTKSSFESPIAGIKVDGIKSRIEFSKDKVTLKQLSANSGKGGFNANGTINLDGLYPTTLDIQAKANQFKLANTDEYNLVIDLDSRLSGPITTPKATGRFAVKNGFIVLEEFGDKTVEDVTLEGEEEVINISYYDSLAIEMEFAIERNFYVRGGGYLDMEIEIAGELDAQKKTNGELSLFGSLRGTSGYVRPLGKRFELEEAEVVFSGPPESPDLNIKSAYVPISRK 1353          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A6A8Q7E2_9BACT (Translocation/assembly module TamB n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q7E2_9BACT)

HSP 1 Score: 326 bits (836), Expect = 5.580e-99
Identity = 154/270 (57.04%), Postives = 209/270 (77.41%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            EDFN+ VFNDFLN++ L+ L+GTLNA++++EGT E+M PKG+L+L+N  V VP+AGITLDGI+S+I+F  +GL++KE+ A SG+G+F A G I+  G+ P ++D+ A+A QF+LANT +YN+ IDL+ KL+G    PKATGKLTVRNGF+ L+DFGE ++E + L+ E+  +FSPYDSLA++M   I+ +FYVRNR YLDMEIE  GS++A KET  DL LFG L G  GY RPL K F +EEA F+FSG  ENP++ I++ Y PP+ QK
Sbjct: 1106 EDFNLTVFNDFLNEETLKDLRGTLNAEINIEGTKEEMTPKGYLKLTNGHVFVPVAGITLDGIQSEIDFSDAGLILKELKANSGKGTFQATGAIKFNGLKPASLDIDARARQFKLANTSNYNLNIDLDSKLSGNPLKPKATGKLTVRNGFILLKDFGEKSVEKIVLEDEDEINFSPYDSLAMDMEVVIEDNFYVRNRKYLDMEIEFTGSMNAYKETSKDLQLFGTLTGEDGYARPLEKLFELEEARFSFSGQPENPQLLIRTSYAPPSPQK 1375          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: UPI00036C9025 (translocation/assembly module TamB domain-containing protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00036C9025)

HSP 1 Score: 316 bits (810), Expect = 1.980e-95
Identity = 150/270 (55.56%), Postives = 206/270 (76.30%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            + FNI+VFNDFL+K+Y R L+G LNA+L+++G   ++ P GF+ L +  +S+PIAGI+L+ I S++EF ++GL++   + KSG G+F ANGTI+L+G+ P  +D+ AKA++F+ ANTD+YN  IDL+ +L+G    PK +G+L V+NGF++LQDFGE ++E V L+ EE+SSFSPYDSLAI+M F I+R+F VRNR YLDMEI L G LDAQK T+ +L LFG L   +GYVRPLGK FN+EE  FTFSGPV  P+I I++ Y P T QK
Sbjct: 1092 DQFNISVFNDFLDKEYTRNLRGILNAELTIDGPFNQVQPTGFMSLHSGHLSIPIAGISLNSINSELEFTENGLLLNSFSMKSG-GAFTANGTIKLDGLTPSGMDINAKATRFQAANTDNYNFTIDLDSRLSGNPLRPKVSGRLAVKNGFIFLQDFGEKSVEAVTLEDEEVSSFSPYDSLAIDMQFVIERNFLVRNRRYLDMEIALTGELDAQKSTDEELELFGTLNAQRGYVRPLGKQFNLEEGTFTFSGPVAEPDIFIRTSYIPQTAQK 1360          
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Match: A0A2D9FZ59_9BACT (AsmA domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FZ59_9BACT)

HSP 1 Score: 307 bits (787), Expect = 2.810e-92
Identity = 144/270 (53.33%), Postives = 199/270 (73.70%), Query Frame = 1
Query:    1 EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKVSVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVPKTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFVYLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLDMEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSGPVENPEISIKSKYTPPTRQK 810
            + FNI+VFNDFLNK+Y+R L+G LNA+L  EG   ++ P GF+ L +  + VP+AGI+L  I S++EF  SGL +   + KSG G+F ANG I+L G+ P  +++ A A++F+ ANTD+YN+ +DLN  ++G    P+ +G+L V+NGF++LQDFGE ++EDV LD E++SSFSPYDSL+I+M FEI+R+F VRNR YLDME+ L G LDAQK  E +L LFG L   +GY RPLGK FN++E +FTFSGP+  PEI I++ + P T QK
Sbjct: 1091 DQFNISVFNDFLNKEYMRNLRGILNAELHAEGPFNELEPSGFVSLHSGHLRVPVAGISLTSINSELEFTDSGLNLNSFSMKSG-GAFTANGRIELNGLSPAGMNINANATRFKAANTDNYNLTVDLNSTISGNPLRPEVSGRLAVKNGFIFLQDFGEKSVEDVTLDDEDVSSFSPYDSLSIDMQFEIERNFLVRNRRYLDMEVALTGELDAQKSIEQELQLFGTLNAERGYARPLGKQFNLDEGSFTFSGPISEPEIFIRTSFIPQTAQK 1359          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88827.20613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8CJD5_9BACT5.310e-10459.26Uncharacterized protein n=1 Tax=Balneola sp. TaxID... [more]
A0A3D1G8C1_9BACT2.530e-10359.26Uncharacterized protein (Fragment) n=1 Tax=Balneol... [more]
A0A1B6Y8U8_9BACT1.760e-10258.21Uncharacterized protein n=1 Tax=Balneola sp. EhC07... [more]
A0A3M8G179_9BACT3.090e-10260.07Uncharacterized protein n=1 Tax=Balneola sp. TaxID... [more]
A0A521BYG3_9BACT2.090e-10056.30Uncharacterized protein n=1 Tax=Gracilimonas mengy... [more]
UPI000CD8A3144.080e-10056.83translocation/assembly module TamB domain-containi... [more]
A0A3F3I4L5_9BACT3.710e-9957.99Uncharacterized protein n=8 Tax=Bacteroidetes/Chlo... [more]
A0A6A8Q7E2_9BACT5.580e-9957.04Translocation/assembly module TamB n=1 Tax=Balneol... [more]
UPI00036C90251.980e-9555.56translocation/assembly module TamB domain-containi... [more]
A0A2D9FZ59_9BACT2.810e-9253.33AsmA domain-containing protein n=1 Tax=Balneola sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88827contigM-pyrifera_M_contig88827:3..812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score318.5
Seed ortholog evalue2.9e-84
Seed eggNOG ortholog1121930.AQXG01000007_gene500
Preferred nametamB
KEGG koko:K09800
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TamB, inner membrane protein subunit of TAM complex
EggNOG OGs4NSGX@976,COG2911@1,COG2911@2
COG Functional cat.M
Best tax levelBacteroidetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816798.2736235-CDS-M-pyrifera_M_contig88827:2..8121622816798.2736235-CDS-M-pyrifera_M_contig88827:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88827 3..812 -
1692278184.952091-CDS-M-pyrifera_M_contig88827:2..8121692278184.952091-CDS-M-pyrifera_M_contig88827:2..812Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88827 3..812 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88827.20613.1prot_M-pyrifera_M_contig88827.20613.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88827 3..812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88827.20613.1

>prot_M-pyrifera_M_contig88827.20613.1 ID=prot_M-pyrifera_M_contig88827.20613.1|Name=mRNA_M-pyrifera_M_contig88827.20613.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
EDFNIAVFNDFLNKDYLRGLKGTLNADLSLEGTTEKMVPKGFLRLSNAKV
SVPIAGITLDGIKSDIEFIQSGLMVKEMTAKSGRGSFNANGTIQLEGIVP
KTIDLTAKASQFRLANTDDYNIVIDLNGKLTGKAQTPKATGKLTVRNGFV
YLQDFGENTIEDVQLDGEELSSFSPYDSLAIEMAFEIQRDFYVRNRTYLD
MEIELIGSLDAQKETEGDLSLFGNLRGVQGYVRPLGKTFNMEEANFTFSG
PVENPEISIKSKYTPPTRQK
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mRNA from alignment at M-pyrifera_M_contig88827:3..812-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88827.20613.1 ID=mRNA_M-pyrifera_M_contig88827.20613.1|Name=mRNA_M-pyrifera_M_contig88827.20613.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig88827:3..812- (Macrocystis pyrifera P11B4 male)
GAAGACTTCAATATTGCGGTTTTCAATGATTTTCTTAATAAAGACTATTT ACGTGGATTAAAGGGTACACTAAACGCCGACCTTTCACTTGAAGGAACTA CTGAAAAAATGGTTCCAAAAGGATTTCTCAGACTGTCAAATGCAAAAGTA TCTGTTCCCATTGCTGGGATTACCTTAGATGGGATTAAATCAGATATTGA GTTCATTCAGTCGGGGCTTATGGTAAAAGAAATGACGGCAAAAAGTGGGA GGGGTAGCTTTAACGCAAATGGCACTATACAACTAGAAGGTATTGTCCCA AAAACGATTGATTTAACGGCAAAAGCAAGTCAATTCAGGTTAGCAAATAC TGATGATTACAATATCGTGATAGATTTAAATGGTAAGCTAACAGGTAAAG CTCAAACTCCAAAAGCAACAGGAAAGCTTACAGTTCGTAACGGCTTCGTT TACTTACAGGATTTTGGGGAAAATACTATTGAAGATGTTCAATTAGATGG CGAGGAATTATCGTCATTTAGTCCTTACGATTCGCTGGCAATAGAAATGG CATTCGAGATTCAACGCGATTTTTATGTTAGAAATAGAACGTACTTAGAC ATGGAGATTGAACTTATTGGATCTTTGGATGCACAAAAAGAAACAGAAGG AGATCTTTCTTTATTTGGTAACCTAAGAGGGGTACAAGGATACGTTCGAC CTCTGGGAAAGACATTTAACATGGAGGAGGCTAACTTTACTTTTAGTGGA CCGGTAGAAAACCCGGAAATAAGTATTAAAAGTAAATACACCCCACCTAC AAGGCAAAAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88827:3..812-

>mRNA_M-pyrifera_M_contig88827.20613.1 ID=mRNA_M-pyrifera_M_contig88827.20613.1|Name=mRNA_M-pyrifera_M_contig88827.20613.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig88827:3..812- (Macrocystis pyrifera P11B4 male)
GAAGACTTCAATATTGCGGTTTTCAATGATTTTCTTAATAAAGACTATTT
ACGTGGATTAAAGGGTACACTAAACGCCGACCTTTCACTTGAAGGAACTA
CTGAAAAAATGGTTCCAAAAGGATTTCTCAGACTGTCAAATGCAAAAGTA
TCTGTTCCCATTGCTGGGATTACCTTAGATGGGATTAAATCAGATATTGA
GTTCATTCAGTCGGGGCTTATGGTAAAAGAAATGACGGCAAAAAGTGGGA
GGGGTAGCTTTAACGCAAATGGCACTATACAACTAGAAGGTATTGTCCCA
AAAACGATTGATTTAACGGCAAAAGCAAGTCAATTCAGGTTAGCAAATAC
TGATGATTACAATATCGTGATAGATTTAAATGGTAAGCTAACAGGTAAAG
CTCAAACTCCAAAAGCAACAGGAAAGCTTACAGTTCGTAACGGCTTCGTT
TACTTACAGGATTTTGGGGAAAATACTATTGAAGATGTTCAATTAGATGG
CGAGGAATTATCGTCATTTAGTCCTTACGATTCGCTGGCAATAGAAATGG
CATTCGAGATTCAACGCGATTTTTATGTTAGAAATAGAACGTACTTAGAC
ATGGAGATTGAACTTATTGGATCTTTGGATGCACAAAAAGAAACAGAAGG
AGATCTTTCTTTATTTGGTAACCTAAGAGGGGTACAAGGATACGTTCGAC
CTCTGGGAAAGACATTTAACATGGAGGAGGCTAACTTTACTTTTAGTGGA
CCGGTAGAAAACCCGGAAATAAGTATTAAAAGTAAATACACCCCACCTAC
AAGGCAAAAAGAAGACTTCAATATTGCGGTTTTCAATGATTTTCTTAATA
AAGACTATTTACGTGGATTAAAGGGTACACTAAACGCCGACCTTTCACTT
GAAGGAACTACTGAAAAAATGGTTCCAAAAGGATTTCTCAGACTGTCAAA
TGCAAAAGTATCTGTTCCCATTGCTGGGATTACCTTAGATGGGATTAAAT
CAGATATTGAGTTCATTCAGTCGGGGCTTATGGTAAAAGAAATGACGGCA
AAAAGTGGGAGGGGTAGCTTTAACGCAAATGGCACTATACAACTAGAAGG
TATTGTCCCAAAAACGATTGATTTAACGGCAAAAGCAAGTCAATTCAGGT
TAGCAAATACTGATGATTACAATATCGTGATAGATTTAAATGGTAAGCTA
ACAGGTAAAGCTCAAACTCCAAAAGCAACAGGAAAGCTTACAGTTCGTAA
CGGCTTCGTTTACTTACAGGATTTTGGGGAAAATACTATTGAAGATGTTC
AATTAGATGGCGAGGAATTATCGTCATTTAGTCCTTACGATTCGCTGGCA
ATAGAAATGGCATTCGAGATTCAACGCGATTTTTATGTTAGAAATAGAAC
GTACTTAGACATGGAGATTGAACTTATTGGATCTTTGGATGCACAAAAAG
AAACAGAAGGAGATCTTTCTTTATTTGGTAACCTAAGAGGGGTACAAGGA
TACGTTCGACCTCTGGGAAAGACATTTAACATGGAGGAGGCTAACTTTAC
TTTTAGTGGACCGGTAGAAAACCCGGAAATAAGTATTAAAAGTAAATACA
CCCCACCTACAAGGCAAAAA
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