mRNA_M-pyrifera_M_contig88714.20599.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A5A8C9E4_CAFRO (S5 DRBM domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8C9E4_CAFRO) HSP 1 Score: 176 bits (446), Expect = 1.620e-49 Identity = 82/149 (55.03%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 447 ++VRGGME T KA+ +VGN GGIG+G+ RH QADRA ELA++AA+RDMI +S Y+GQLYHDLVGKKN +KV++ SR P ++ P +I T +EL G+RH A ++GPKRR +T+ QALF AF + PY+ SA RG R++++ DR Sbjct: 409 KIVRGGMETTEKAMAIVGNGCGGIGFGMARHAQADRATELAVAAAQRDMIHVSLYKGQLYHDLVGKKNNIKVLIWSRAPGHEKPSGDHMITTIMELMGVRHYSAKIIGPKRRNPFTVAQALFNAFDNHLPYEVSAANRGLRLLNLGADR 557
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A482REY0_9ARCH (S5 DRBM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REY0_9ARCH) HSP 1 Score: 130 bits (328), Expect = 3.940e-35 Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 447 QVV+GGM + + ++VGN GG G+G+G+HK+ A + A++ A+RDMI +S ++ QLYHDL+GKKN + VIV + P + +I+ E+ GI HA A +VG +RR Y +VQALF++F + P + A MRG R+ + DR Sbjct: 55 QVVKGGMIASTRCCIVVGNGMGGGGFGIGKHKEPFMATKQALANAQRDMIHVSLHKKQLYHDLIGKKNNLYVIVRTMPASTVAQNCSPLIQDIFEMMGIEHASAKIVGSRRRNPYNVVQALFDSFNHHMPPEHEAYMRGLRMQWMGADR 203
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A7S3UU99_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU99_HETAK) HSP 1 Score: 84.7 bits (208), Expect = 1.250e-17 Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYR-GQLYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHVSDDR 447 +VV+GG T +A+V++GN +G +GYG+G+ + AV+ AI AA R++I++ + G L D GK N V + + P +I T L+ AG+ A VG RR + +++A F A ++++ +A AR RG+RIV + R Sbjct: 42 KVVKGGYLSTNRAVVVIGNLKGAVGYGMGKAAENRDAVDRAIRAASRNLIYVDRFLDGGLAQDCAGKHNTCLVKLRAVRPGAGLSAGP-LIRTVLQSAGVADASGKAVG--RRNVFAVLRATFRALERHEGVEAIARKRGKRIVSMEKAR 188
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A7S1U8N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N8_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.130e-17 Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQ-LYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 435 +VV GG +AL +VGN G +G+GVG+ + A E + A++++I + Y G+ LYHDL GK N +V + +RP + R I +E AGI A + GP Y++V+A F A +++ AR+RGRRI+ + Sbjct: 66 KVVPGGTVPRFRALTVVGNINGAVGFGVGKAEDIQDATEKSFRNAKKNIIIVDRYFGRALYHDLYGKHNGCRVWIYARPVNTEL-RAGRITAAIMEAAGIMDATVRIDGPMN--PYSVVRATFNALSKHRSIVHHARVRGRRILSL 208
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A2D5YPT1_9PROT (30S ribosomal protein S5 n=2 Tax=Bacteriovoracales TaxID=2024979 RepID=A0A2D5YPT1_9PROT) HSP 1 Score: 74.3 bits (181), Expect = 1.350e-13 Identity = 44/143 (30.77%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRI 426 +V++GG + AL++VG+++G +GYG+G+ K+ A+ A AA++ MI + G + H+++G+ + K++ +P A T + + LELAGI+ + + + IV+A F+A KQ + D AR+RG+ + Sbjct: 53 KVMKGGRRFSFSALMIVGDKKGKVGYGLGKAKEVPEAIRKATQAAQKSMISVPVDGGTIPHEVLGEFDAGKILF--KPAAEGTGVKAAGACRSILELAGIKDVLTK--SQRGNNPHNIVKATFDALKQLRSADEVARVRGKDV 191
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A1F3SJJ1_9PROT (30S ribosomal protein S5 n=1 Tax=Bdellovibrionales bacterium GWA2_49_15 TaxID=1797384 RepID=A0A1F3SJJ1_9PROT) HSP 1 Score: 73.6 bits (179), Expect = 1.540e-13 Identity = 43/146 (29.45%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 435 +VV+GG + AL++VG+++G +G+G+G+ + A+ AI AA R+MI +S +G + H ++G + ++I +P A T + + LELAG+++ + V + + +V+A F+A + + + A MRG I + Sbjct: 26 KVVKGGRRFSFSALMIVGDKKGSVGFGLGKANEVPEAIRKAIQAAHRNMIKVSLDKGTIPHQIIGTHDAGRIIF--KPAAEGTGIKAAGACRSILELAGVKNVLTKSV--RNNNPHNVVKATFDALRALRSAEQIAAMRGIDIKRI 167
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A2E2EE63_9PROT (30S ribosomal protein S5 n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E2EE63_9PROT) HSP 1 Score: 73.2 bits (178), Expect = 3.530e-13 Identity = 45/140 (32.14%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRG 417 +VV+GG + ALV+VG+++G +GYG+G+ K+ A+ A A + MI + G + H+++G+ + K++ +P A T + T LELAGI++ + + + + +V+A FEAF+Q + D A+ RG Sbjct: 48 KVVKGGRRFSFSALVIVGDQKGKVGYGLGKAKEVPDAIRKASQEAAKKMITVPVEDGTIPHEVLGEFDAGKILF--KPAAVGTGVKAAGACRTILELAGIKNVLTKSL--RGSNPHNVVKATFEAFRQMRSVDEVAQSRG 183
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A2E2UBG6_9PROT (30S ribosomal protein S5 n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E2UBG6_9PROT) HSP 1 Score: 72.8 bits (177), Expect = 5.310e-13 Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTP-RMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRG 417 +VV+GG + ALV+VG+++G +GYG+G+ K+ A+ A A + MI++ +G L H+++G+ + K++ RP + T + T LELAG+++ + + + + +V+A F A K + D A+ RG Sbjct: 52 KVVKGGRRFSFSALVIVGDQKGKVGYGLGKAKEVPDAIRKASQVAAKSMIYVPVEKGTLPHEVLGEFDAGKILF--RPASEGTGIKAAGACRTILELAGVKNVLTKSM--RGNNPHNVVKATFAALKNIRSVDQVAKARG 187
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: A0A1Y2FSQ1_PROLT (Ribosomal protein S5, C-terminal domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FSQ1_PROLT) HSP 1 Score: 71.2 bits (173), Expect = 6.440e-13 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 40 LVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQ-LYHDLVGKKNRVKVIVESRPPAYDTPRMHWIIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 435 L +VGN +G IG+G G+H + A A++ A ++M F+ Y+ + +Y D+ K + V++ + SRP + H+I E AGI A V G RT +V+ +FEA K+ + A+ RGRRIV V Sbjct: 4 LAVVGNGKGMIGFGEGKHAEQGTATRKAVTQAVKNMEFVHRYQDRTIYGDVDYKFHAVQLRLRSRPAGFGIRANHFIYEIC-RCAGITDLSAKVWGS--RTGMNVVKGVFEALKEQRLPSTIAQARGRRIVDV 133
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Match: R7GKK4_9CLOT (30S ribosomal protein S5 n=3 Tax=Terrabacteria group TaxID=1783272 RepID=R7GKK4_9CLOT) HSP 1 Score: 71.6 bits (174), Expect = 8.400e-13 Identity = 45/146 (30.82%), Postives = 78/146 (53.42%), Query Frame = 1 Query: 1 QVVRGGMEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRGQLYHDLVGKKNRVKVIVESRPPAYDTPRMHW-IIETALELAGIRHAMATVVGPKRRTTYTIVQALFEAFKQYQPYDASARMRGRRIVHV 435 +VV+GG ALV++G+R+G +G+G G+ + A++ AI A+++MI++ T + H + G KV++ RP A T + + LELAGI ++ +G RT +V+A FE K+ + A RG+ + + Sbjct: 27 KVVKGGRRFRFAALVVIGDRKGNVGFGSGKSNEVPDAIKKAIENAKKNMIYVPTVNTTIPHTVTGTFGAGKVLL--RPAAAGTGVIAGGPVRAVLELAGISDILSKALGS--RTPINMVRATFEGLKELSTVEQIAARRGKTVEEI 168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88714.20599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88714.20599.1 >prot_M-pyrifera_M_contig88714.20599.1 ID=prot_M-pyrifera_M_contig88714.20599.1|Name=mRNA_M-pyrifera_M_contig88714.20599.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp MEETAKALVLVGNRRGGIGYGVGRHKQADRAVELAISAAERDMIFISTYRback to top mRNA from alignment at M-pyrifera_M_contig88714:270..716- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88714.20599.1 ID=mRNA_M-pyrifera_M_contig88714.20599.1|Name=mRNA_M-pyrifera_M_contig88714.20599.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig88714:270..716- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88714:270..716- >mRNA_M-pyrifera_M_contig88714.20599.1 ID=mRNA_M-pyrifera_M_contig88714.20599.1|Name=mRNA_M-pyrifera_M_contig88714.20599.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig88714:270..716- (Macrocystis pyrifera P11B4 male)back to top |