mRNA_M-pyrifera_M_contig88702.20597.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88702.20597.1
Unique NamemRNA_M-pyrifera_M_contig88702.20597.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A812XZQ5_SYMMI (SKI2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XZQ5_SYMMI)

HSP 1 Score: 225 bits (573), Expect = 1.420e-70
Identity = 116/187 (62.03%), Postives = 143/187 (76.47%), Query Frame = 1
Query:    4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKAR 564
            LPQV R  D++ RG G+HHGG+LP+LKECVE+LFSK +VKVL ATETFAMGVNMPAR+V+FNG RKHDG+ FR L PGEYTQMAGRAGRRG D VG V++ AW +  PE+  LR LL G    LSS+FRLT+ M+L+LLR  +LSV D+I+RSFSEF  QR ++  D +A L +    LA+L+ K R
Sbjct:   31 LPQVLRTEDLLLRGFGVHHGGLLPVLKECVEILFSKSVVKVLLATETFAMGVNMPARSVVFNGYRKHDGKGFRDLLPGEYTQMAGRAGRRGKDKVGTVIIAAWNELPPEVS-LRTLLTGTATTLSSQFRLTYNMILNLLRANDLSVEDMIKRSFSEFHMQRAISVADINAKLVKCQRLLASLEEKKR 216          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7S1XTT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTT6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.130e-69
Identity = 136/255 (53.33%), Postives = 163/255 (63.92%), Query Frame = 1
Query:    4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLA--RAVLQDKRATSAALTPGRVLVV 762
            LPQV  + D   RG+G+HHGG+LPILKE VE+LF++GLVK+LFATETFAMGVNMPARTV+FNG RKHDG SFR L PGEYTQMAGRAGRRG+D VG VL+  W +A P    L+ +L G P  L SRFRL + M+LSLLRVE+LSV D+IRRSFSEF TQR L  RD   L A G     AL R                 A D  G +   +  + A  AE       L      L+  RA++A L PGR+ ++
Sbjct:   85 LPQVLTVCDAAYRGVGVHHGGLLPILKEVVEILFARGLVKILFATETFAMGVNMPARTVVFNGTRKHDGRSFRGLLPGEYTQMAGRAGRRGLDPVGNVLICVWEEA-PATATLKAMLTGPPTRLESRFRLRYAMILSLLRVEDLSVEDMIRRSFSEFATQRALGSRDLPGLKAAGRDAADALTR-----------------AADVLGPENDTVGEWAALVAEIGRMHARLVGHAIALEGPRASAALLPPGRLCLL 321          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7R9U769_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U769_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.980e-69
Identity = 145/255 (56.86%), Postives = 173/255 (67.84%), Query Frame = 1
Query:    4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEA-SQSLARAV-LQDKRATSAALTPGRVLVV 762
            LPQV  + DM  RG+G+HHGG+LPILKE VE+LFS+GLVKVLFATETFAMGVNMPARTV+FNG RKHDG SFR L PGEYTQMAGRAGRRG+DSVG VL+  W + VP +  L+ +L G P  L SRFRL + M+LSLLRVE+LSV D+IRRSFSEF TQR L  RD   L A G     A D   R   +  C+       P   GE G+ I S+   TA      S+ L+ A  L+  RA+S  L PGR+ ++
Sbjct:  697 LPQVVTVCDMASRGVGVHHGGLLPILKEVVEILFSEGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGRSFRDLLPGEYTQMAGRAGRRGLDSVGNVLICVWEE-VPHVASLKAMLTGPPTKLESRFRLRYAMILSLLRVEDLSVEDMIRRSFSEFATQRALGSRDLPGLRAAGRD---AADALVRVADTMDCVLP----GPGDPGERGRAIGSYAEVTARIGRLYSRLLSHAFSLEGPRASSTVLAPGRLCLL 943          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: D0N907_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0N907_PHYIT)

HSP 1 Score: 238 bits (608), Expect = 2.720e-68
Identity = 133/255 (52.16%), Postives = 183/255 (71.76%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762
            ELPQV  +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++  W D VPE   LR +L G+  +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++   L+ +G   L  L+R            +E+    +A GE  + +Q+F     +  E  + L + +L +  +A   A+ PGRV++V
Sbjct:  676 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLVPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEATSLRTMLAGKATSLSSQFRLTYNMMLNLLRVEVLTVEDMMKRSFSEFHTQKALASKNLPQLIHKGKTLLQQLERS----------LVEDYPHLEASGELAQ-MQAFYQLKRDKRELEKKLTKWLLANNLQAAKNAIAPGRVVLV 918          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A662WV88_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV88_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.880e-68
Identity = 134/255 (52.55%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762
            ELPQV  +++M++RG+G+HHGG+LPILKE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++  W D VPE   LR +L G+  +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++   L+ +G   L  L++            +E+    +A GE  K +Q F     E  E  + L R +L +  +A   A+ PGR++++
Sbjct:  771 ELPQVLTMKEMLKRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPRLIQKGKTLLQQLEKS----------LVEDYPHLEASGEL-KQMQEFYQLKREKRELEKKLTRWLLTNHIQAAKNAIAPGRIVLL 1013          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7S1BTG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTG8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.210e-68
Identity = 120/185 (64.86%), Postives = 148/185 (80.00%), Query Frame = 1
Query:    4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRK 558
            LPQV ++ +MV RG+G+HHGG+LPILKE VE+LFS+ L+KVLFATETFAMGVNMPAR V+FN IRKHDG  FR L PGEYTQMAGRAGRRG+D+VG V+L  + D  P   +LR +L G+   LSS+FRLT+ M+L+LLRVE++SV D+I+RSFSEF TQR LA  ++  LLARG   LA LDR+
Sbjct:  579 LPQVKQVCEMVGRGIGIHHGGLLPILKELVEILFSRNLIKVLFATETFAMGVNMPARAVVFNSIRKHDGTKFRELFPGEYTQMAGRAGRRGLDTVGTVILCCFGDKPPPENILRNMLTGQSMTLSSQFRLTYNMILNLLRVEDMSVEDMIKRSFSEFATQRALANNNYPKLLARGVRSLARLDRQ 763          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A225WSS8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSS8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.320e-67
Identity = 131/255 (51.37%), Postives = 181/255 (70.98%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762
            ELPQV  +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++  W D VPE   LR +L G+  +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++   L+ +G   L  L R            +E+    +A GE  + +Q F     +  E  + L + +L +  +A   A+ PGR++++
Sbjct:  724 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQQLKRS----------LVEDYPHLEANGELAQ-MQEFYQLKRDKRELEKKLTKWLLTNNIQAAKTAIAPGRIVIL 966          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A2P4XV81_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XV81_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.380e-67
Identity = 131/255 (51.37%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762
            ELPQV  +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++  W D VPE   LR +L G+  +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++   L+ +G   L  L+R            +E+    +A GE  + +Q F     +  E  + L + +L +  +A   A+ PGR++++
Sbjct:  761 ELPQVVTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQHLERS----------LVEDYPHLEASGELAQ-MQEFYQLKRDKRELEKKLTKWLLTNNIQAAKNAIAPGRIVIL 1003          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A3R7NEF4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NEF4_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.760e-67
Identity = 131/255 (51.37%), Postives = 181/255 (70.98%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762
            ELPQV  +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++  W D VPE   LR +L G+  +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++   L+ +G   L  L+R            +E+    +  GE  + +Q F     E  E  + L + +L +  +A   A+ PGR++++
Sbjct:  678 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALAAKNIPKLIQKGKTLLQQLERS----------LVEDYPHLETSGELAQ-MQEFYQLKREKRELEKKLTKWLLANNIQAAKNAIAPGRIVIL 920          
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A397D844_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D844_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.140e-67
Identity = 111/168 (66.07%), Postives = 143/168 (85.12%), Query Frame = 1
Query:    1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRD 504
            +LPQV ++RDM+ RG+G+HHGG+LPILKE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG+SFR L PGEYTQMAGRAGRRG+D++G V++  W + V +   LR +L G P  L S+FRLT+ M+L+LLRVE+++V D+I+RSFSEFRTQ+ LA ++
Sbjct:  103 QLPQVLQVRDMLLRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKSFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGE-VSDTTSLRTMLLGLPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALASKN 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812XZQ5_SYMMI1.420e-7062.03SKI2 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S1XTT6_9STRA1.130e-6953.33Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9U769_9STRA1.980e-6956.86Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D0N907_PHYIT2.720e-6852.16DEAD/DEAH box RNA helicase, putative n=14 Tax=Phyt... [more]
A0A662WV88_9STRA3.880e-6852.55Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S1BTG8_9STRA6.210e-6864.86Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A225WSS8_9STRA1.320e-6751.37DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]
A0A2P4XV81_9STRA1.380e-6751.37DEAD/DEAH box RNA helicase (Fragment) n=2 Tax=Phyt... [more]
A0A3R7NEF4_9STRA1.760e-6751.37Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]
A0A397D844_9STRA2.140e-6766.07Helicase C-terminal domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88702contigM-pyrifera_M_contig88702:43..816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score231.1
Seed ortholog evalue5.6e-58
Seed eggNOG ortholog4787.PITG_07744T0
Preferred nameSKIV2L
KEGG koko:K12599
KEGG Pathwayko03018,map03018
KEGG ModuleM00392
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0015672,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019439,GO:0023052,GO:0030001,GO:0030968,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034427,GO:0034620,GO:0034641,GO:0034655,GO:0034976,GO:0035864,GO:0035966,GO:0035967,GO:0040029,GO:0042221,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055087,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0070478,GO:0070481,GO:0070887,GO:0071310,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575
EggNOG free text desc.DSHCT
EggNOG OGs3Q86H@4776,COG4581@1,KOG0947@2759
COG Functional cat.A
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Exons1
Model size774
Cds size744
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816797.3735979-CDS-M-pyrifera_M_contig88702:42..7861622816797.3735979-CDS-M-pyrifera_M_contig88702:42..786Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88702 43..786 -
1692278184.3115468-CDS-M-pyrifera_M_contig88702:42..7861692278184.3115468-CDS-M-pyrifera_M_contig88702:42..786Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88702 43..786 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816797.3844352-UTR-M-pyrifera_M_contig88702:786..8161622816797.3844352-UTR-M-pyrifera_M_contig88702:786..816Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88702 787..816 -
1692278184.3281584-UTR-M-pyrifera_M_contig88702:786..8161692278184.3281584-UTR-M-pyrifera_M_contig88702:786..816Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig88702 787..816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88702.20597.1prot_M-pyrifera_M_contig88702.20597.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88702 43..786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88702.20597.1

>prot_M-pyrifera_M_contig88702.20597.1 ID=prot_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTV
IFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPE
IGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRT
QRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGED
GKFIQSFVAATAEAAEASQSLARAVLQDKRATSAALTPGRVLVVAPPP
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mRNA from alignment at M-pyrifera_M_contig88702:43..816-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88702.20597.1 ID=mRNA_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig88702:43..816- (Macrocystis pyrifera P11B4 male)
GAGCTTCCGCAGGTGTACAGGCTGCGGGATATGGTACGGAGGGGGTTGGG CATGCACCACGGTGGAGTGCTTCCGATTCTCAAGGAGTGCGTGGAACTGC TCTTCTCCAAAGGCTTGGTCAAGGTGCTGTTTGCAACGGAAACCTTTGCC ATGGGCGTGAACATGCCTGCGCGCACCGTCATCTTCAACGGCATCCGAAA ACACGACGGAGAATCCTTCCGATGGCTCGAGCCTGGAGAATACACGCAAA TGGCAGGACGAGCCGGGAGAAGAGGCATCGATTCAGTGGGACTCGTGCTC CTCCCGGCTTGGACAGACGCTGTTCCGGAAATTGGAGTTTTGCGGCAGCT GCTACAAGGAAGACCACGAGCCCTCTCTTCCCGATTCCGCCTCACATTCC GCATGCTGCTGTCGCTTTTGCGCGTGGAGGAGCTGAGCGTGACGGACGTG ATTCGCCGGTCCTTCTCCGAATTCCGCACGCAACGATTGCTTGCCGGTCG CGATTTTTCCGCACTTCTCGCCAGAGGGTCAGCCAGACTGGCAGCGTTGG ACAGAAAGGCGCGCTCCCACCCTTCCACGCGATGCCTTGCGTTGGAGGAA GGGTTGGCTCCTGATGCCAGAGGAGAGGACGGGAAATTCATCCAATCCTT CGTCGCAGCCACTGCGGAAGCTGCAGAGGCGTCGCAATCTTTGGCGAGAG CCGTTTTGCAAGATAAGAGAGCGACTTCCGCAGCACTCACCCCCGGAAGA GTGCTCGTTGTAGCTCCTCCACCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88702:43..816-

>mRNA_M-pyrifera_M_contig88702.20597.1 ID=mRNA_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig88702:43..816- (Macrocystis pyrifera P11B4 male)
ATGGTACGGAGGGGGTTGGGCATGCACCACGGTGGAGTGCTTCCGATTCT
CAAGGAGTGCGTGGAACTGCTCTTCTCCAAAGGCTTGGTCAAGGTGCTGT
TTGCAACGGAAACCTTTGCCATGGGCGTGAACATGCCTGCGCGCACCGTC
ATCTTCAACGGCATCCGAAAACACGACGGAGAATCCTTCCGATGGCTCGA
GCCTGGAGAATACACGCAAATGGCAGGACGAGCCGGGAGAAGAGGCATCG
ATTCAGTGGGACTCGTGCTCCTCCCGGCTTGGACAGACGCTGTTCCGGAA
ATTGGAGTTTTGCGGCAGCTGCTACAAGGAAGACCACGAGCCCTCTCTTC
CCGATTCCGCCTCACATTCCGCATGCTGCTGTCGCTTTTGCGCGTGGAGG
AGCTGAGCGTGACGGACGTGATTCGCCGGTCCTTCTCCGAATTCCGCACG
CAACGATTGCTTGCCGGTCGCGATTTTTCCGCACTTCTCGCCAGAGGGTC
AGCCAGACTGGCAGCGTTGGACAGAAAGGCGCGCTCCCACCCTTCCACGC
GATGCCTTGCGTTGGAGGAAGGGTTGGCTCCTGATGCCAGAGGAGAGGAC
GGGAAATTCATCCAATCCTTCGTCGCAGCCACTGCGGAAGCTGCAGAGGC
GTCGCAATCTTTGGCGAGAGCCGTTTTGCAAGATAAGAGAGCGACTTCCG
CAGCACTCACCCCCGGAAGAGTGCTCGTTGTAGCTCCTCCACCCATGGTA
CGGAGGGGGTTGGGCATGCACCACGGTGGAGTGCTTCCGATTCTCAAGGA
GTGCGTGGAACTGCTCTTCTCCAAAGGCTTGGTCAAGGTGCTGTTTGCAA
CGGAAACCTTTGCCATGGGCGTGAACATGCCTGCGCGCACCGTCATCTTC
AACGGCATCCGAAAACACGACGGAGAATCCTTCCGATGGCTCGAGCCTGG
AGAATACACGCAAATGGCAGGACGAGCCGGGAGAAGAGGCATCGATTCAG
TGGGACTCGTGCTCCTCCCGGCTTGGACAGACGCTGTTCCGGAAATTGGA
GTTTTGCGGCAGCTGCTACAAGGAAGACCACGAGCCCTCTCTTCCCGATT
CCGCCTCACATTCCGCATGCTGCTGTCGCTTTTGCGCGTGGAGGAGCTGA
GCGTGACGGACGTGATTCGCCGGTCCTTCTCCGAATTCCGCACGCAACGA
TTGCTTGCCGGTCGCGATTTTTCCGCACTTCTCGCCAGAGGGTCAGCCAG
ACTGGCAGCGTTGGACAGAAAGGCGCGCTCCCACCCTTCCACGCGATGCC
TTGCGTTGGAGGAAGGGTTGGCTCCTGATGCCAGAGGAGAGGACGGGAAA
TTCATCCAATCCTTCGTCGCAGCCACTGCGGAAGCTGCAGAGGCGTCGCA
ATCTTTGGCGAGAGCCGTTTTGCAAGATAAGAGAGCGACTTCCGCAGCAC
TCACCCCCGGAAGAGTGCTCGTTGTAGCTCCTCCACCC
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