mRNA_M-pyrifera_M_contig88702.20597.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A812XZQ5_SYMMI (SKI2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XZQ5_SYMMI) HSP 1 Score: 225 bits (573), Expect = 1.420e-70 Identity = 116/187 (62.03%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKAR 564 LPQV R D++ RG G+HHGG+LP+LKECVE+LFSK +VKVL ATETFAMGVNMPAR+V+FNG RKHDG+ FR L PGEYTQMAGRAGRRG D VG V++ AW + PE+ LR LL G LSS+FRLT+ M+L+LLR +LSV D+I+RSFSEF QR ++ D +A L + LA+L+ K R Sbjct: 31 LPQVLRTEDLLLRGFGVHHGGLLPVLKECVEILFSKSVVKVLLATETFAMGVNMPARSVVFNGYRKHDGKGFRDLLPGEYTQMAGRAGRRGKDKVGTVIIAAWNELPPEVS-LRTLLTGTATTLSSQFRLTYNMILNLLRANDLSVEDMIKRSFSEFHMQRAISVADINAKLVKCQRLLASLEEKKR 216
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7S1XTT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTT6_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.130e-69 Identity = 136/255 (53.33%), Postives = 163/255 (63.92%), Query Frame = 1 Query: 4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLA--RAVLQDKRATSAALTPGRVLVV 762 LPQV + D RG+G+HHGG+LPILKE VE+LF++GLVK+LFATETFAMGVNMPARTV+FNG RKHDG SFR L PGEYTQMAGRAGRRG+D VG VL+ W +A P L+ +L G P L SRFRL + M+LSLLRVE+LSV D+IRRSFSEF TQR L RD L A G AL R A D G + + + A AE L L+ RA++A L PGR+ ++ Sbjct: 85 LPQVLTVCDAAYRGVGVHHGGLLPILKEVVEILFARGLVKILFATETFAMGVNMPARTVVFNGTRKHDGRSFRGLLPGEYTQMAGRAGRRGLDPVGNVLICVWEEA-PATATLKAMLTGPPTRLESRFRLRYAMILSLLRVEDLSVEDMIRRSFSEFATQRALGSRDLPGLKAAGRDAADALTR-----------------AADVLGPENDTVGEWAALVAEIGRMHARLVGHAIALEGPRASAALLPPGRLCLL 321
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7R9U769_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U769_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.980e-69 Identity = 145/255 (56.86%), Postives = 173/255 (67.84%), Query Frame = 1 Query: 4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEA-SQSLARAV-LQDKRATSAALTPGRVLVV 762 LPQV + DM RG+G+HHGG+LPILKE VE+LFS+GLVKVLFATETFAMGVNMPARTV+FNG RKHDG SFR L PGEYTQMAGRAGRRG+DSVG VL+ W + VP + L+ +L G P L SRFRL + M+LSLLRVE+LSV D+IRRSFSEF TQR L RD L A G A D R + C+ P GE G+ I S+ TA S+ L+ A L+ RA+S L PGR+ ++ Sbjct: 697 LPQVVTVCDMASRGVGVHHGGLLPILKEVVEILFSEGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGRSFRDLLPGEYTQMAGRAGRRGLDSVGNVLICVWEE-VPHVASLKAMLTGPPTKLESRFRLRYAMILSLLRVEDLSVEDMIRRSFSEFATQRALGSRDLPGLRAAGRD---AADALVRVADTMDCVLP----GPGDPGERGRAIGSYAEVTARIGRLYSRLLSHAFSLEGPRASSTVLAPGRLCLL 943
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: D0N907_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0N907_PHYIT) HSP 1 Score: 238 bits (608), Expect = 2.720e-68 Identity = 133/255 (52.16%), Postives = 183/255 (71.76%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762 ELPQV +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++ W D VPE LR +L G+ +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++ L+ +G L L+R +E+ +A GE + +Q+F + E + L + +L + +A A+ PGRV++V Sbjct: 676 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLVPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEATSLRTMLAGKATSLSSQFRLTYNMMLNLLRVEVLTVEDMMKRSFSEFHTQKALASKNLPQLIHKGKTLLQQLERS----------LVEDYPHLEASGELAQ-MQAFYQLKRDKRELEKKLTKWLLANNLQAAKNAIAPGRVVLV 918
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A662WV88_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV88_9STRA) HSP 1 Score: 238 bits (607), Expect = 3.880e-68 Identity = 134/255 (52.55%), Postives = 182/255 (71.37%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762 ELPQV +++M++RG+G+HHGG+LPILKE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++ W D VPE LR +L G+ +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++ L+ +G L L++ +E+ +A GE K +Q F E E + L R +L + +A A+ PGR++++ Sbjct: 771 ELPQVLTMKEMLKRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPRLIQKGKTLLQQLEKS----------LVEDYPHLEASGEL-KQMQEFYQLKREKRELEKKLTRWLLTNHIQAAKNAIAPGRIVLL 1013
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A7S1BTG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTG8_9STRA) HSP 1 Score: 233 bits (595), Expect = 6.210e-68 Identity = 120/185 (64.86%), Postives = 148/185 (80.00%), Query Frame = 1 Query: 4 LPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRK 558 LPQV ++ +MV RG+G+HHGG+LPILKE VE+LFS+ L+KVLFATETFAMGVNMPAR V+FN IRKHDG FR L PGEYTQMAGRAGRRG+D+VG V+L + D P +LR +L G+ LSS+FRLT+ M+L+LLRVE++SV D+I+RSFSEF TQR LA ++ LLARG LA LDR+ Sbjct: 579 LPQVKQVCEMVGRGIGIHHGGLLPILKELVEILFSRNLIKVLFATETFAMGVNMPARAVVFNSIRKHDGTKFRELFPGEYTQMAGRAGRRGLDTVGTVILCCFGDKPPPENILRNMLTGQSMTLSSQFRLTYNMILNLLRVEDMSVEDMIKRSFSEFATQRALANNNYPKLLARGVRSLARLDRQ 763
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A225WSS8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSS8_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.320e-67 Identity = 131/255 (51.37%), Postives = 181/255 (70.98%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762 ELPQV +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++ W D VPE LR +L G+ +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++ L+ +G L L R +E+ +A GE + +Q F + E + L + +L + +A A+ PGR++++ Sbjct: 724 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQQLKRS----------LVEDYPHLEANGELAQ-MQEFYQLKRDKRELEKKLTKWLLTNNIQAAKTAIAPGRIVIL 966
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A2P4XV81_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XV81_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.380e-67 Identity = 131/255 (51.37%), Postives = 182/255 (71.37%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762 ELPQV +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++ W D VPE LR +L G+ +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++ L+ +G L L+R +E+ +A GE + +Q F + E + L + +L + +A A+ PGR++++ Sbjct: 761 ELPQVVTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALASKNIPKLIQKGKTLLQHLERS----------LVEDYPHLEASGELAQ-MQEFYQLKRDKRELEKKLTKWLLTNNIQAAKNAIAPGRIVIL 1003
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A3R7NEF4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NEF4_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.760e-67 Identity = 131/255 (51.37%), Postives = 181/255 (70.98%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRDFSALLARGSARLAALDRKARSHPSTRCLALEEGLAPDARGEDGKFIQSFVAATAEAAEASQSLARAVLQDK-RATSAALTPGRVLVV 762 ELPQV +++M++RG+G+HHGG+LPI+KE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG++FR L PGEYTQMAGRAGRRG+DSVG V++ W D VPE LR +L G+ +LSS+FRLT+ M+L+LLRVE L+V D+++RSFSEF TQ+ LA ++ L+ +G L L+R +E+ + GE + +Q F E E + L + +L + +A A+ PGR++++ Sbjct: 678 ELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWND-VPEPTSLRTMLAGKATSLSSQFRLTYNMILNLLRVEVLTVEDMMKRSFSEFHTQKALAAKNIPKLIQKGKTLLQQLERS----------LVEDYPHLETSGELAQ-MQEFYQLKREKRELEKKLTKWLLANNIQAAKNAIAPGRIVIL 920
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Match: A0A397D844_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D844_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.140e-67 Identity = 111/168 (66.07%), Postives = 143/168 (85.12%), Query Frame = 1 Query: 1 ELPQVYRLRDMVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVIFNGIRKHDGESFRWLEPGEYTQMAGRAGRRGIDSVGLVLLPAWTDAVPEIGVLRQLLQGRPRALSSRFRLTFRMLLSLLRVEELSVTDVIRRSFSEFRTQRLLAGRD 504 +LPQV ++RDM+ RG+G+HHGG+LPILKE VE+LF +GLVKVLF+TETFAMGVNMPARTV+FNGIRKHDG+SFR L PGEYTQMAGRAGRRG+D++G V++ W + V + LR +L G P L S+FRLT+ M+L+LLRVE+++V D+I+RSFSEFRTQ+ LA ++ Sbjct: 103 QLPQVLQVRDMLLRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKSFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGE-VSDTTSLRTMLLGLPTKLESQFRLTYNMILNLLRVEDMTVEDMIKRSFSEFRTQKALASKN 269 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88702.20597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88702.20597.1 >prot_M-pyrifera_M_contig88702.20597.1 ID=prot_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp MVRRGLGMHHGGVLPILKECVELLFSKGLVKVLFATETFAMGVNMPARTVback to top mRNA from alignment at M-pyrifera_M_contig88702:43..816- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88702.20597.1 ID=mRNA_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig88702:43..816- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88702:43..816- >mRNA_M-pyrifera_M_contig88702.20597.1 ID=mRNA_M-pyrifera_M_contig88702.20597.1|Name=mRNA_M-pyrifera_M_contig88702.20597.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig88702:43..816- (Macrocystis pyrifera P11B4 male)back to top |