mRNA_M-pyrifera_M_contig88675.20591.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: D8LRX5_ECTSI (LigB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX5_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.120e-52 Identity = 77/117 (65.81%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 QMNADSPAAEWYRTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 Q++A S AA+WYRTFT +W KPSAIVV+SAHWE RG++ VT G KH LF+DYYGFP + Y+L Y PG P LA RI+ +L+ADG A+G+ +RGYDHG F PLKLMYPDAD+PVVQV Sbjct: 3 QIDATSAAAQWYRTFTKKWAKPSAIVVVSAHWEGRGAVKVTTGEKHPLFFDYYGFPDYCYDLEYAPPGHPELARRIIELLEADGFNARGDDSRGYDHGTFIPLKLMYPDADVPVVQV 119
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: H2FST0_OCESG (Extradiol ring-cleavage dioxygenase III subunit B n=1 Tax=Oceanimonas sp. (strain GK1 / IBRC-M 10197) TaxID=511062 RepID=H2FST0_OCESG) HSP 1 Score: 132 bits (331), Expect = 1.060e-35 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 37 RTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 + G+ +PSAI+VISAHWE R VT+GA L YDYYGFP +Y + Y CPGEPALA+RI + LQ GIPA + RGYDHG F PLKLMYP+ADIP VQ+ Sbjct: 33 QALAGKLERPSAILVISAHWEARVPT-VTSGATPGLIYDYYGFPPESYSIRYPCPGEPALAHRICQALQEAGIPASEDEQRGYDHGLFVPLKLMYPEADIPCVQL 136
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: A0A2E7E826_9GAMM (Dioxygenase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E7E826_9GAMM) HSP 1 Score: 130 bits (327), Expect = 2.860e-35 Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 1 Query: 49 GQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 G+ PKP+AI+VISAHWEER +TAGA L YDYYGFP +YE+ Y PGE LA+RI + L+ GI A+ + RG+DHG F PLKLMYPDADIPVVQ+ Sbjct: 21 GEIPKPTAILVISAHWEERVPT-ITAGANPDLIYDYYGFPPQSYEIRYPAPGETTLASRIHQALEQSGIHARMDNKRGFDHGVFVPLKLMYPDADIPVVQL 120
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: A0A2M7G2W7_9BACT (Dioxygenase n=1 Tax=bacterium (Candidatus Blackallbacteria) CG17_big_fil_post_rev_8_21_14_2_50_48_46 TaxID=2014261 RepID=A0A2M7G2W7_9BACT) HSP 1 Score: 130 bits (327), Expect = 3.750e-35 Identity = 58/109 (53.21%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 25 AEWYRTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 A+W + P P AIVV+SAHWE + +T A+ L YDYYGFP HTY+L Y PG P LA +I L A IPA+ + RGYDHG F PLKL+YP+A IPVVQ+ Sbjct: 33 ADWLKNLRHTLPVPQAIVVVSAHWENSAEVLITGHAQPPLLYDYYGFPEHTYQLSYPAPGAPDLAGKIQTHLAAQAIPARIDAERGYDHGVFIPLKLIYPEAQIPVVQI 141
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: A0A1J4QGR4_9GAMM (Dioxygenase n=1 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QGR4_9GAMM) HSP 1 Score: 130 bits (327), Expect = 4.330e-35 Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 28 EWYRTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 +W + G+ +P AI+++SAHWE +TAGA+ L YDYYGFP +YE+ Y CPGEPALA ++ + L A G+PA+ + RG+DHG F PLKLMYP+ADIP VQ+ Sbjct: 30 QWLQDMAGRLRRPEAILIVSAHWEAAVPT-ITAGARPGLIYDYYGFPPESYEIQYPCPGEPALAQQVQQALMAAGMPARLDAERGFDHGVFVPLKLMYPEADIPCVQL 136
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: A0A1R4B5L6_9VIBR (LigB family dioxygenase n=1 Tax=Vibrio palustris TaxID=1918946 RepID=A0A1R4B5L6_9VIBR) HSP 1 Score: 130 bits (326), Expect = 5.820e-35 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 37 RTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 + G+ KPSAI+VISAHWEE+ +TAGA SL YDYYGFPA TYEL Y PGEP LA I L++ G+ AK +T RG+DHG F PL LMYPDA IPVV++ Sbjct: 34 QALAGRLAKPSAILVISAHWEEKVPT-ITAGAHPSLIYDYYGFPAETYELTYPAPGEPKLAQEIYDCLKSSGVDAKLDTQRGWDHGVFVPLMLMYPDASIPVVEL 137
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: UPI001EF8DF4C (dioxygenase n=1 Tax=Oceanisphaera litoralis TaxID=225144 RepID=UPI001EF8DF4C) HSP 1 Score: 129 bits (325), Expect = 8.620e-35 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 49 GQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 G KPSAI+VISAHWEE +T+GAK L YDYYGFP +YE+ Y CPGEPALA +I + L+ G+PA+ + RG+DHG F PLKLMYP ADIP VQ+ Sbjct: 37 GTLRKPSAILVISAHWEESVPT-ITSGAKPPLIYDYYGFPPESYEITYPCPGEPALARQIQQALEQAGLPARLDAQRGFDHGHFVPLKLMYPQADIPCVQL 136
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: A0A7V1LJY5_9BACT (Dioxygenase n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V1LJY5_9BACT) HSP 1 Score: 129 bits (324), Expect = 1.190e-34 Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 37 RTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 R G KPSAI+VISAHWEE + VT+ A+ L YDY GFP +Y + Y CPGEPALA + +R L++ GI A+ N RG+DHG F PLK+MYP ADIPVVQ+ Sbjct: 32 RHIAGSMKKPSAILVISAHWEEE-TATVTSAARPPLIYDYNGFPEESYHIRYPCPGEPALAEKTLRALRSSGIAARANEQRGFDHGVFVPLKIMYPQADIPVVQL 135
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: UPI001247FA37 (dioxygenase n=1 Tax=Marinobacter TaxID=2742 RepID=UPI001247FA37) HSP 1 Score: 129 bits (324), Expect = 1.190e-34 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 61 KPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 KPSAI+VISAHWEE +TAGAK L YDYYGFP YE+ Y CPGEPALA ++ + L GIP + + RG+DHG F PLKLMYPDADIP +Q+ Sbjct: 41 KPSAILVISAHWEESVPT-ITAGAKPPLIYDYYGFPPEAYEIEYPCPGEPALAQQVYQALDQAGIPVRLDEQRGFDHGLFVPLKLMYPDADIPCIQL 136
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Match: UPI001F5DC9F6 (dioxygenase n=1 Tax=Rhodocyclus purpureus TaxID=1067 RepID=UPI001F5DC9F6) HSP 1 Score: 128 bits (322), Expect = 1.390e-34 Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 61 KPSAIVVISAHWEERGSICVTAGAKHSLFYDYYGFPAHTYELGYDCPGEPALANRIVRMLQADGIPAKGNTARGYDHGGFSPLKLMYPDADIPVVQV 351 +PSAIVV+SAHW E + VT+G + LFYDYYGFP HTYEL Y PGEP LA RI +L +PA+ + ARG+DHG F PLKLM+PDADIPVVQ+ Sbjct: 26 RPSAIVVVSAHWLEP-AFSVTSGLQPELFYDYYGFPPHTYELRYPAPGEPQLAARIADLLGQARLPAQQDAARGFDHGMFIPLKLMFPDADIPVVQL 121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88675.20591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88675.20591.1 >prot_M-pyrifera_M_contig88675.20591.1 ID=prot_M-pyrifera_M_contig88675.20591.1|Name=mRNA_M-pyrifera_M_contig88675.20591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp MNADSPAAEWYRTFTGQWPKPSAIVVISAHWEERGSICVTAGAKHSLFYDback to top mRNA from alignment at M-pyrifera_M_contig88675:10..360- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88675.20591.1 ID=mRNA_M-pyrifera_M_contig88675.20591.1|Name=mRNA_M-pyrifera_M_contig88675.20591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=351bp|location=Sequence derived from alignment at M-pyrifera_M_contig88675:10..360- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88675:10..360- >mRNA_M-pyrifera_M_contig88675.20591.1 ID=mRNA_M-pyrifera_M_contig88675.20591.1|Name=mRNA_M-pyrifera_M_contig88675.20591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig88675:10..360- (Macrocystis pyrifera P11B4 male)back to top |