mRNA_M-pyrifera_M_contig88649.20586.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88649.20586.1
Unique NamemRNA_M-pyrifera_M_contig88649.20586.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A7K1ZAG4_9ACTN (Zn-dependent alcohol dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAG4_9ACTN)

HSP 1 Score: 332 bits (850), Expect = 1.060e-110
Identity = 173/244 (70.90%), Postives = 198/244 (81.15%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S +G PV RGLGVG FAE TV+ A+GAV+I  DIPLEVACVIGCAMQTGVGAVFNTA VE+G++V+VMGLGGIGQAIV GA +AGA+ II SDP E RRE A  FGAT +IDPT  DL + V + T G G DYAF+A G AALVEQGI STRVGGTTVMVGA   +E+VTI+AAVLFMTMQK+L+G LLG CWP RDIPL+LDL+R G LDL  M+SHRL L EVN+GI +LH  DGIRTVLD+
Sbjct:  121 SRNGAPVWRGLGVGAFAEYTVVPASGAVRIDPDIPLEVACVIGCAMQTGVGAVFNTAKVEKGATVVVMGLGGIGQAIVGGAAVAGASRIIASDPAEGRREMASSFGATDLIDPTAGDLVSTVMDLTSGTGADYAFDAVGSAALVEQGINSTRVGGTTVMVGASPIEENVTINAAVLFMTMQKKLLGCLLGSCWPTRDIPLMLDLWRGGRLDLQRMISHRLPLGEVNQGIAKLHATDGIRTVLDV 364          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A3M2FXU2_ACTSX (Zn-dependent alcohol dehydrogenase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FXU2_ACTSX)

HSP 1 Score: 320 bits (820), Expect = 3.620e-106
Identity = 169/244 (69.26%), Postives = 197/244 (80.74%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S  G PV RGLG+GGFAE TVI+A+GAV++  DIPLEVACVIGCA+QTGVGAVFNTA V RG  VLVMGLGGIGQA+VQGARIAGAT II SDPVE+RRE AG FGAT +IDPT DDL A V E T G+GVD AFEAAG+A LVE GIA TRVGGTTVMVGA   +E VTI+ AVLF TMQKRL+G+LLG C P+RDIPL+++L++ G LDLD MVS  + L ++  G  RL  A+G+RTV+D+
Sbjct:  121 SRRGEPVQRGLGIGGFAEATVIAASGAVRLDPDIPLEVACVIGCAVQTGVGAVFNTADVRRGDRVLVMGLGGIGQAVVQGARIAGATRIIASDPVEARREAAGRFGATDLIDPTVDDLAAVVAELTEGEGVDVAFEAAGRAELVETGIAVTRVGGTTVMVGASPVEESVTIAPAVLFTTMQKRLLGTLLGGCVPERDIPLMVELWQAGHLDLDAMVSAHVPLDDIEVGFERLRRAEGVRTVVDL 364          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A7X6AQ43_9ACTN (Zinc-binding dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AQ43_9ACTN)

HSP 1 Score: 287 bits (735), Expect = 7.560e-95
Identity = 154/198 (77.78%), Postives = 168/198 (84.85%), Query Frame = 1
Query:   85 KIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVN 678
            KI +DIPL+VA VIGCAMQTGVGAV NTA VE GSSVLVMGLGGIGQAIVQGARIAGA+ IIVSDPVESRRE A GFGAT ++DP  DDL  AV E T G G DYAFEA G+AALVEQG+ +TRVGGTTVMVGA   DE VTI+AAVLFMTMQKRL+GSLLG CWPDRDIPLLL L+R G LDL+ M+SHRL L+EVN
Sbjct:    1 KIADDIPLDVASVIGCAMQTGVGAVLNTAQVEAGSSVLVMGLGGIGQAIVQGARIAGASRIIVSDPVESRREAASGFGATDLVDPGADDLVEAVAELTDGAGADYAFEAVGRAALVEQGLEATRVGGTTVMVGAAPIDEHVTINAAVLFMTMQKRLLGSLLGGCWPDRDIPLLLGLWRAGQLDLEAMISHRLPLTEVN 198          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A2E8LDE6_9ACTN (Alcohol dehydrogenase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LDE6_9ACTN)

HSP 1 Score: 291 bits (744), Expect = 1.290e-94
Identity = 153/241 (63.49%), Postives = 183/241 (75.93%), Query Frame = 1
Query:   10 GTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            G  V RGLGVG FAE TV+ A+GAVK+P+D PL++ACVIGCA+QTGVGA  NTA V  GSSVLV+G GG+GQA+VQGARIAGA  +IVS+PVE RR  A   GAT  +DPT+ DL  AV + T G GVDYAFEAAG   LV+ GI  T VGGT VMVGAP  ++ VTI +AV+FMTM KR++ SLLG CWP RDIP L+  +R G LDL G+VS RL L++VNEGIR L   DG+RTV+D+
Sbjct:  124 GDLVHRGLGVGAFAEYTVVPASGAVKVPDDTPLDIACVIGCAVQTGVGAALNTAQVRAGSSVLVLGAGGVGQAVVQGARIAGAEHVIVSEPVEERRAHALAMGATTAVDPTSTDLREAVMDLTGGAGVDYAFEAAGSGRLVQTGIELTGVGGTVVMVGAPPIEDAVTIDSAVIFMTMGKRILSSLLGSCWPARDIPRLIGYWREGQLDLRGLVSRRLDLADVNEGIRLLRETDGVRTVVDV 364          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A6B1EEK0_9ACTN (Alcohol dehydrogenase catalytic domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EEK0_9ACTN)

HSP 1 Score: 274 bits (701), Expect = 1.540e-87
Identity = 145/244 (59.43%), Postives = 178/244 (72.95%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S  G  V RGLGVG FAE TV+ A+G V++ +D+PLEVAC+IGCA+QTGVGAV NTA VERG++V+V GLGG+G + VQGARIAGA+ II SDPVESRR+ A   GAT  +     +L AAV EAT G+G DYAFE AG A L   G+  T  GGTTV+VGAP  +    I +  +FM  QKRLVGSLLG CWP RDIPLL+ L++ G LDL+ M+SHR+ LS VNEG  RL  A G+RTV+++
Sbjct:  167 SRRGRLVHRGLGVGAFAEHTVVPASGVVRLDDDVPLEVACLIGCAVQTGVGAVLNTASVERGATVVVTGLGGVGISAVQGARIAGASRIIASDPVESRRQAALRLGATDAVGADPAELKAAVAEATGGRGADYAFETAGVAGLASLGVEITGPGGTTVVVGAPPPEHTTNIGSTTVFMIQQKRLVGSLLGDCWPSRDIPLLIALWQRGDLDLESMISHRVPLSGVNEGFDRLRAAQGLRTVVEV 410          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A4R5LTI4_9GAMM (Zn-dependent alcohol dehydrogenase n=2 Tax=Seongchinamella unica TaxID=2547392 RepID=A0A4R5LTI4_9GAMM)

HSP 1 Score: 273 bits (697), Expect = 1.550e-87
Identity = 145/244 (59.43%), Postives = 178/244 (72.95%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S +G  V RG G+G  AE   + A GAVKI +DIPL+VACVIGCA+QTGVGAV NT  +E G++ +V+GLGGIG A +QGARIAGA  II SDPV  RR+ A  FGATHV+DP  DD+ A V EAT G GVDYAFEAAGKAAL+EQG+  TR+GGTTV+VG+PA +ED+ I   VLF  ++K+L G LLG C    +IP LL L+R G LD++ M+SHR  L E+NEG   L    GIRTV++I
Sbjct:  123 SRNGEVVYRGCGIGALAEFVTLPATGAVKIDQDIPLDVACVIGCALQTGVGAVLNTVDMEAGATCVVLGLGGIGMAAIQGARIAGAEVIIASDPVAERRQQARRFGATHVVDPGNDDIPAIVMEATDGIGVDYAFEAAGKAALIEQGLQLTRMGGTTVIVGSPALEEDLHIPNVVLFQALEKKLCGCLLGSCNSLYEIPRLLRLWRRGLLDIEAMISHRRPLEEINEGFADLEQGRGIRTVIEI 366          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A2E7IP42_9GAMM (Alcohol dehydrogenase n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E7IP42_9GAMM)

HSP 1 Score: 267 bits (683), Expect = 2.220e-85
Identity = 143/240 (59.58%), Postives = 174/240 (72.50%), Query Frame = 1
Query:   13 TPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            T + RG GVGG AE  +  A+GAVKI +D+PLE+ACVIGCA+QTGVGAV NTA VE G++VL+MGLGG+G A +QGAR+AGA+ II SDPV +RRE A GFGATH IDPT DDL A   E T G G+DYAFE AGKAAL+E GI  TR GGTTV VGAP  +E + I  AVLF   +K+L G LLG C    +IP ++ L++ G L+ D M++ R  LSEVNEG   L    GIRTV++I
Sbjct:  127 TVIYRGCGVGGLAEYAIAPASGAVKIDDDVPLELACVIGCALQTGVGAVLNTAKVETGATVLIMGLGGVGMATIQGARLAGASLIICSDPVAARREQAKGFGATHCIDPTKDDLAAICAELTGGIGLDYAFETAGKAALIEAGINLTRSGGTTVCVGAPPIEEGIHIPHAVLFAAFEKKLCGCLLGSCNSSYEIPRMIRLWKQGLLNFDDMITSRRPLSEVNEGFADLANNRGIRTVIEI 366          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: B7RYR2_9GAMM (Alcohol dehydrogenase GroES-like domain family n=1 Tax=marine gamma proteobacterium HTCC2148 TaxID=247634 RepID=B7RYR2_9GAMM)

HSP 1 Score: 266 bits (680), Expect = 5.750e-85
Identity = 141/244 (57.79%), Postives = 180/244 (73.77%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S +G  V RG G+G  AE   + A GA+KI +DIPL+VACVIGCA+QTGVGAV NTA +E G++ +V+GLGGIG A +QGARIAGA+ II SDPV  RR+ A GFGATHV+DP  +D+ A V   T   GVDYAFEAAGKAAL+EQGI  TR+GGTTV+VG+PA +E++TI   VLF  ++K+L G LLG      +IP LL L+R G LD++GM++ R  L E+NEG + L  + GIRTV++I
Sbjct:  123 SLNGEQVFRGCGIGALAEYVTLPATGAIKIDKDIPLDVACVIGCALQTGVGAVLNTAEMEAGATCVVLGLGGIGMAAIQGARIAGASVIIASDPVAERRDKAIGFGATHVVDPVNEDINALVMTLTAAIGVDYAFEAAGKAALIEQGIQMTRMGGTTVIVGSPAIEENLTIPNVVLFQALEKKLCGCLLGSSNSLFEIPRLLRLWRQGLLDMEGMITGRRPLEEINEGFKDLEESRGIRTVIEI 366          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A5P9NJY5_9GAMM (Zn-dependent alcohol dehydrogenase n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NJY5_9GAMM)

HSP 1 Score: 266 bits (679), Expect = 8.140e-85
Identity = 142/244 (58.20%), Postives = 176/244 (72.13%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDI 732
            S +G  +LRG GVG  AE   + A GA+KI +DIPL++ACVIGCA+QTGVGAV NTA VE G+S ++ GLGG+G A VQGARIAGA+ II SDPV +RR+ A  FGATHVIDPT+DDL A V E T G G DY  E AGKA L+EQG+  +R+GGTTV VG+P F+E +TI   VLF  ++K+L G LLG      +IP LL L+R G LD+ GM++HR  L+EVNEG   L    GIRTV++I
Sbjct:  123 SLNGQQILRGAGVGALAEYVTLPATGAIKIDKDIPLDLACVIGCALQTGVGAVLNTADVEAGASCVITGLGGVGMAAVQGARIAGASLIIASDPVAARRDLALQFGATHVIDPTSDDLAALVQELTAGIGADYVIETAGKATLIEQGVQLSRIGGTTVAVGSPGFEEHLTIPNVVLFQALEKKLCGCLLGSSNSLFEIPRLLRLWRAGDLDMAGMITHRRPLAEVNEGFADLEAGRGIRTVIEI 366          
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Match: A0A3L7E2X9_9GAMM (Zn-dependent alcohol dehydrogenase n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7E2X9_9GAMM)

HSP 1 Score: 266 bits (679), Expect = 9.760e-85
Identity = 143/246 (58.13%), Postives = 174/246 (70.73%), Query Frame = 1
Query:    1 SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGVGAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRETAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIASTRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPLLLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDINA 738
            S  G  V RG G+G  AE   + A GAVKI  DIPL+VACVIGCA+QTGVGAV NTA +E G++ +V+GLGGIG A VQGARIAGA  II SDPV  RR+ A  FGATHV+DP   DL   + E T G GVDYAFEAAG+AAL+EQG+  TR GGTTV+VG+P  +ED+ I   VLF  ++K+L G LLG C    +IP LL L+R G LD++ M++HR  L+EVNEG   L    GIRTV++I A
Sbjct:  123 SRRGERVYRGCGIGALAEYVTLPATGAVKIDTDIPLDVACVIGCALQTGVGAVLNTANMEAGATCVVLGLGGIGMATVQGARIAGAELIIASDPVAERRQQAARFGATHVVDPAAGDLPGLIMEVTAGIGVDYAFEAAGRAALIEQGLQLTRKGGTTVIVGSPPLEEDLHIPNVVLFQALEKKLCGCLLGSCNSLYEIPRLLRLWRQGLLDIESMITHRRPLAEVNEGFADLAQGRGIRTVIEIQA 368          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88649.20586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1ZAG4_9ACTN1.060e-11070.90Zn-dependent alcohol dehydrogenase n=2 Tax=Acidimi... [more]
A0A3M2FXU2_ACTSX3.620e-10669.26Zn-dependent alcohol dehydrogenase n=1 Tax=Actinom... [more]
A0A7X6AQ43_9ACTN7.560e-9577.78Zinc-binding dehydrogenase n=1 Tax=Actinomycetia b... [more]
A0A2E8LDE6_9ACTN1.290e-9463.49Alcohol dehydrogenase n=5 Tax=Acidimicrobiaceae ba... [more]
A0A6B1EEK0_9ACTN1.540e-8759.43Alcohol dehydrogenase catalytic domain-containing ... [more]
A0A4R5LTI4_9GAMM1.550e-8759.43Zn-dependent alcohol dehydrogenase n=2 Tax=Seongch... [more]
A0A2E7IP42_9GAMM2.220e-8559.58Alcohol dehydrogenase n=1 Tax=Spongiibacteraceae b... [more]
B7RYR2_9GAMM5.750e-8557.79Alcohol dehydrogenase GroES-like domain family n=1... [more]
A0A5P9NJY5_9GAMM8.140e-8558.20Zn-dependent alcohol dehydrogenase n=1 Tax=Haliogl... [more]
A0A3L7E2X9_9GAMM9.760e-8558.13Zn-dependent alcohol dehydrogenase n=1 Tax=Seongch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88649contigM-pyrifera_M_contig88649:76..816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score270.8
Seed ortholog evalue6.4e-70
Seed eggNOG ortholog247634.GPB2148_183
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273
KEGG koko:K00121
KEGG ReactionR00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily
EggNOG OGs1J4MG@118884,1MUK4@1224,1RNQ4@1236,COG1062@1,COG1062@2
EC1.1.1.1,1.1.1.284
COG Functional cat.C
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size741
Cds size741
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816796.902237-CDS-M-pyrifera_M_contig88649:75..8161622816796.902237-CDS-M-pyrifera_M_contig88649:75..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88649 76..816 -
1692278184.0766149-CDS-M-pyrifera_M_contig88649:75..8161692278184.0766149-CDS-M-pyrifera_M_contig88649:75..816Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88649 76..816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88649.20586.1prot_M-pyrifera_M_contig88649.20586.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88649 76..816 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88649.20586.1

>prot_M-pyrifera_M_contig88649.20586.1 ID=prot_M-pyrifera_M_contig88649.20586.1|Name=mRNA_M-pyrifera_M_contig88649.20586.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
SHHGTPVLRGLGVGGFAEQTVISANGAVKIPEDIPLEVACVIGCAMQTGV
GAVFNTAGVERGSSVLVMGLGGIGQAIVQGARIAGATTIIVSDPVESRRE
TAGGFGATHVIDPTTDDLGAAVTEATHGQGVDYAFEAAGKAALVEQGIAS
TRVGGTTVMVGAPAFDEDVTISAAVLFMTMQKRLVGSLLGHCWPDRDIPL
LLDLYRNGSLDLDGMVSHRLGLSEVNEGIRRLHGADGIRTVLDINA*
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mRNA from alignment at M-pyrifera_M_contig88649:76..816-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88649.20586.1 ID=mRNA_M-pyrifera_M_contig88649.20586.1|Name=mRNA_M-pyrifera_M_contig88649.20586.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=741bp|location=Sequence derived from alignment at M-pyrifera_M_contig88649:76..816- (Macrocystis pyrifera P11B4 male)
TCCCACCACGGCACACCGGTACTGCGCGGCCTCGGCGTCGGCGGATTCGC CGAGCAGACGGTGATCTCCGCGAACGGCGCCGTGAAGATCCCCGAGGACA TCCCCCTCGAGGTGGCGTGCGTGATCGGCTGCGCCATGCAGACCGGTGTC GGCGCGGTGTTCAACACCGCCGGTGTCGAGCGTGGGAGTTCGGTACTCGT CATGGGCCTTGGTGGGATCGGCCAGGCCATCGTCCAGGGCGCCCGCATCG CCGGAGCGACCACGATCATCGTGTCGGATCCGGTCGAGTCCCGCCGCGAG ACCGCCGGCGGATTCGGCGCGACCCATGTGATCGACCCCACCACCGACGA CCTCGGCGCCGCCGTCACCGAGGCCACCCACGGACAGGGTGTCGACTATG CGTTCGAGGCCGCCGGCAAGGCTGCCCTCGTCGAGCAAGGCATCGCCAGC ACGCGGGTGGGCGGCACGACGGTGATGGTCGGCGCGCCCGCGTTCGACGA GGACGTCACCATCAGCGCGGCCGTGCTGTTCATGACCATGCAGAAGCGGT TGGTCGGCAGCCTCCTCGGCCATTGCTGGCCCGACCGCGACATTCCGCTC CTGCTCGACCTCTATCGCAACGGCAGCCTCGATCTCGACGGAATGGTGAG CCATCGTCTCGGATTGTCCGAGGTCAACGAGGGCATCCGTCGACTCCACG GCGCGGACGGCATCCGGACCGTGCTCGACATCAACGCCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88649:76..816-

>mRNA_M-pyrifera_M_contig88649.20586.1 ID=mRNA_M-pyrifera_M_contig88649.20586.1|Name=mRNA_M-pyrifera_M_contig88649.20586.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig88649:76..816- (Macrocystis pyrifera P11B4 male)
TCCCACCACGGCACACCGGTACTGCGCGGCCTCGGCGTCGGCGGATTCGC
CGAGCAGACGGTGATCTCCGCGAACGGCGCCGTGAAGATCCCCGAGGACA
TCCCCCTCGAGGTGGCGTGCGTGATCGGCTGCGCCATGCAGACCGGTGTC
GGCGCGGTGTTCAACACCGCCGGTGTCGAGCGTGGGAGTTCGGTACTCGT
CATGGGCCTTGGTGGGATCGGCCAGGCCATCGTCCAGGGCGCCCGCATCG
CCGGAGCGACCACGATCATCGTGTCGGATCCGGTCGAGTCCCGCCGCGAG
ACCGCCGGCGGATTCGGCGCGACCCATGTGATCGACCCCACCACCGACGA
CCTCGGCGCCGCCGTCACCGAGGCCACCCACGGACAGGGTGTCGACTATG
CGTTCGAGGCCGCCGGCAAGGCTGCCCTCGTCGAGCAAGGCATCGCCAGC
ACGCGGGTGGGCGGCACGACGGTGATGGTCGGCGCGCCCGCGTTCGACGA
GGACGTCACCATCAGCGCGGCCGTGCTGTTCATGACCATGCAGAAGCGGT
TGGTCGGCAGCCTCCTCGGCCATTGCTGGCCCGACCGCGACATTCCGCTC
CTGCTCGACCTCTATCGCAACGGCAGCCTCGATCTCGACGGAATGGTGAG
CCATCGTCTCGGATTGTCCGAGGTCAACGAGGGCATCCGTCGACTCCACG
GCGCGGACGGCATCCGGACCGTGCTCGACATCAACGCCTGATCCCACCAC
GGCACACCGGTACTGCGCGGCCTCGGCGTCGGCGGATTCGCCGAGCAGAC
GGTGATCTCCGCGAACGGCGCCGTGAAGATCCCCGAGGACATCCCCCTCG
AGGTGGCGTGCGTGATCGGCTGCGCCATGCAGACCGGTGTCGGCGCGGTG
TTCAACACCGCCGGTGTCGAGCGTGGGAGTTCGGTACTCGTCATGGGCCT
TGGTGGGATCGGCCAGGCCATCGTCCAGGGCGCCCGCATCGCCGGAGCGA
CCACGATCATCGTGTCGGATCCGGTCGAGTCCCGCCGCGAGACCGCCGGC
GGATTCGGCGCGACCCATGTGATCGACCCCACCACCGACGACCTCGGCGC
CGCCGTCACCGAGGCCACCCACGGACAGGGTGTCGACTATGCGTTCGAGG
CCGCCGGCAAGGCTGCCCTCGTCGAGCAAGGCATCGCCAGCACGCGGGTG
GGCGGCACGACGGTGATGGTCGGCGCGCCCGCGTTCGACGAGGACGTCAC
CATCAGCGCGGCCGTGCTGTTCATGACCATGCAGAAGCGGTTGGTCGGCA
GCCTCCTCGGCCATTGCTGGCCCGACCGCGACATTCCGCTCCTGCTCGAC
CTCTATCGCAACGGCAGCCTCGATCTCGACGGAATGGTGAGCCATCGTCT
CGGATTGTCCGAGGTCAACGAGGGCATCCGTCGACTCCACGGCGCGGACG
GCATCCGGACCGTGCTCGACATCAACGCCTGA
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