mRNA_M-pyrifera_M_contig88646.20585.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A6J4IAA4_9ACTN (Uncharacterized protein n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IAA4_9ACTN) HSP 1 Score: 99.0 bits (245), Expect = 6.670e-20 Identity = 86/254 (33.86%), Postives = 114/254 (44.88%), Query Frame = 1 Query: 58 SSGKAGEHAYFPGFVAL---------LLAAAGVWIGWRLLR-----RGSDVVRTGVRTDEL-LALVTAGAVAAVFALGPSPGGVKGPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILEVGGPMARVDVPEGDRLL-VYEALADLDPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 S G G GFV L L+AAAG +G R R G R R + L A V A+ A+GP G + P+R L VPG + RV SRF ++ + ALL G + L PR + ++ GL++ E+ +V GD +L V EAL DLDPG V ELPV + +V A R + D R+ GYSG P G AE +P+P A GV +V+LH Sbjct: 290 SGGDDGSGEGTDGFVGLTVVALAGIALVAAAGGVVGSRRGRSASGGEGRQQHRPADRRRRYAVPLGLACVVGALLAVGPDQGLLSVPYRQLRPLVPGLESARVLSRFWILPALGLALLAGRGLERLPALRPRPA---LGGLVVGLLVAELFVRPGSAEVDIGDEVLAVNEALDDLDPGAVTELPVPALP---HYPYVLAVRQLRSLEDGLPRVEGYSGDAPPGLAEYLQATSTFPSPEAFTALRQAGVRHVVLH 537
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A1F5AV48_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium RBG_16_63_16 TaxID=1797273 RepID=A0A1F5AV48_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 7.280e-20 Identity = 85/268 (31.72%), Postives = 125/268 (46.64%), Query Frame = 1 Query: 4 LTPQRDNWFWGSVLDPINSSGKAGEHAYFPGFVALLLAAAGVWIGWRLLRRGSDVVRTGVRTDEL------LALVTAGAV---AAVFALGPSPGGVKGPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILEVGG-PMARVDVPEGDRLL-VYEALA-DLDPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 L N +G++ + +S E FPG +A +LA AG+ + L R S ++ L LA GA+ A +F GP KGP+ LL ++VPGF+G+RV +RF + A+L + LI R ++ LV+ E P+ + P G + VY LA D G VLELP+ P G+ VE PR+Y +T+ W++ +NGYSG P + E + P A LGV Y+I+H Sbjct: 271 LAASPTNRLYGALTERFQTS----EKHLFPGALAFILAVAGL-MSLTLRRHPSGRGQSPPGGQSLPLPSPKLAAAVYGAITLLAFLFTFGP-----KGPYVLLFKYVPGFNGLRVPARFQIFVMFGIAVLAAFGTKALIARLAGNFRRLAFGLLPLLVLAEYAAFPVPLEEFPPGGEVPEVYRWLAAQKDDGAVLELPLPPPRFGL--GLVECPRVYFSTVHWHNLVNGYSGFFPPVYDELLRRWRELPVAQNVRDASDLGVRYLIIH 526
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A399XXG9_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399XXG9_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.940e-18 Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 217 GAVAAVFALGP--SPGGVKGPFRLLHRF---VPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILEVGGPMARVDVPEGDRLLVYEA-LADLDPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 GA +F+ GP + G+ P L +RF VPGF G+RV SRFAV+ ++ A+L + +L R +A VA + L V P+ V +++ Y A L + PG V+E+P+ +GV A + R Y +T DW R+NGYSG P G+ E ++G+P ++ + E V YV++H Sbjct: 387 GATGLIFSFGPYVAVPGIGRPIPLPYRFLMFVPGFKGLRVPSRFAVLFYLGLAVLGAMGVAWLWRRGRAGKAGVVALSLLLLAEFGVSLPVTTGLVGTAEQMPSYVAWLREAPPGPVIEMPIYR--EGVTGAVRQGYRQYVSTFDWKPRVNGYSGYFPVGYKEFVEVMRGFPDEASISALEEREVRYVLVH 575
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A2V8DBG0_9BACT (PA14 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8DBG0_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 1.140e-13 Identity = 65/233 (27.90%), Postives = 105/233 (45.06%), Query Frame = 1 Query: 106 LLLAAAGVW--IGWRLLRRGSDVVRTG-VRTDELLALVTAGAVAAVFALGPSPGGVKGPFRLLHRFV---PGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILE-----VGGPMARVDVPEGDRLLVYEALADLDPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 +L+ AG+W + W + R + + R + + AV ALGP G L RFV PGF+ IRV+SRF ++ + A+L G+ + R R R A ++ L++ E +G +VP DR L + P VV E PV+ ++ + E M H+T W ++GYSG + + +Q +P ++ LGVTY+++H Sbjct: 185 ILVVVAGIWCVLAWPISRHETWIESLAPYRRNPTAFYLLLTAVCVGLALGPPYG--------LWRFVYWLPGFNLIRVSSRFMIVGLLGIAVLAGMGFDKISSRLARQRRVVFATVVGVLLVAEYGAIPIGVQPGNAEVPAIDRWLDSQP----KPFVVAEAPVQRLENSSAFERQETAYMIHSTAHWQKTVHGYSGWRTALHGQLYSKMQAFPDETSVASLSDLGVTYIVVH 405
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A7C6DQP6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6DQP6_9CHLR) HSP 1 Score: 77.8 bits (190), Expect = 1.320e-12 Identity = 74/240 (30.83%), Postives = 106/240 (44.17%), Query Frame = 1 Query: 88 FPGFVALLLAAAGVWIGWRLLRRGSDVVRTGVRTDELLALVTAGAVAAVFALGPSPGGVKG----------PFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILEVGGPMARVDVPEGDRLL-VYEALADLD-PGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 FPG +AL+LAA G L RG R D L+ AGA A+ ALGP + P++ L+ +PGF +RV SRFAV+ + A L G A R V ++ + + + P+ VP G + +Y LA P V+ELP+ P+ FV+AP Y +T + +NG P E AA L+ +P+ + LGV Y +LH Sbjct: 287 FPGAIALVLAALG-------LARG--------RADRLVWACVAGA-GALLALGPGLHLTRDGPAVALPITLPYQWLYDLLPGFQSLRVPSRFAVLMMLGTASLAGXXXXXXXXGATSRRRLAVGAVVGAIWVESIAVPLPASTVPAGASIPEIYRWLAAQPAPRSVVELPLE-PNP-----FVDAPWAYLSTYHRSRLVNGARSFVPVEHLEIAARLRSFPSEPSVATLRALGVDYAVLH 504
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A7Y4WVW2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4WVW2_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 7.250e-12 Identity = 69/204 (33.82%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 223 VAAVFALGPSPGGV------KGPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAA----------WVAP-IIAGLVILEVGGPMARV-DVPEGDRLLVYEALADLDP-GVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPT-PSAENRA-ETLGVTYVILH 771 +AA LGP P + P+R+ + +VPGFDG+RV +RFA++ A+L G A + RAPR A WV+P ++ G + +R+ D+ R VY +A L P V+ ELP+ P + V++ MY A + INGYSG P+G+ E A L P A RA E G T+ I+H Sbjct: 429 LAAWLTLGPVPESLGQPVTLASPYRVAYDYVPGFDGLRVPARFAMVLTFMLAVLAGSGAARVGRRAPRTVGALLTAALLLEGWVSPFVLNGAPAEDPDSVTSRLGDLDRPGR--VYATVAALGPDAVIAELPLGGPFEDVRF-------MYQALGHRHRLINGYSGFFPEGYRELATALSAAAQDPGAALRALEMQGATHAIVH 623
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A7C3TUJ2_9DELT (F5/8 type C domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3TUJ2_9DELT) HSP 1 Score: 75.5 bits (184), Expect = 7.720e-12 Identity = 56/171 (32.75%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 268 GPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILE-VGGPMARVDVPEG-DRLLVYEALADL-DPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 GP+ LL R VPGFDG+RV+SRF + ++ AL L + L A + ++ L+++E + P+ VP G D VY L D G V+ELP+ P ++ A +EAPR+Y + NGYSG P + E + T + LG+ Y+++H Sbjct: 432 GPYELLRRLVPGFDGLRVSSRFFIFVLLSLALFAALGFKALHRGMGNPSAKALLVVLPLLMLIEYLAVPLPIFPVPTGKDIPPVYSWLKKQPDDGAVVELPL--PKPWIEMARIEAPRVYFSIYHGKRLFNGYSGYFPPVYLEMLERMAEGFTEERIKDFQALGLKYLVVH 600
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A1F2SZC5_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21 TaxID=1797183 RepID=A0A1F2SZC5_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 3.270e-11 Identity = 75/225 (33.33%), Postives = 105/225 (46.67%), Query Frame = 1 Query: 184 RTDELLALVTAGAVAAVFALGPSPGG------VKGPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAA-WVAPIIAGLVILE-------VGG--PMARVDVPEGDRLL-------VYEALADLDPG--VVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWP----TPSAENRAETLGVTYVILH 771 R ++ AGAV +LGP+P + P+RLL VPGFDG+RV +R A+++ A A+L G A L R RA V +AG+ +LE V G P+ + PE RL VY + D +P V++ELP+ PD ++ MY++T+ W +NGYSG TP + L P A RA G TY I+H Sbjct: 423 RDRGFFVVMLAGAVW--LSLGPAPQSLGRPVEIAAPYRLLFEAVPGFDGLRVPARLAMVAAFALAVLGGYGAAAL----SRTRAGRMVVAALAGVFLLEATHVPFLVNGVTPLRSFNTPEA-RLYRPARAPAVYARVRD-EPADSVLVELPLGPPDFDLR-------AMYYSTVHWRPVVNGYSGFTPPHYPRLVTALSEIPRHPEVALAALRAS--GATYAIVH 630
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A7C6EN02_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A7C6EN02_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 4.770e-11 Identity = 54/175 (30.86%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 262 VKGPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAA--WV-APIIAGLVILEVGGPMARVDVP-EGDRLLVYEALADL-DPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWPTPSAENRAETLGVTYVILH 771 + GP+ LL R++PGF IRV SRF+V+ ++ A+L GLA L+ R+ + W+ A ++A ++I EV P+ + VP +G +Y ++ L + +LELP+ P + ++ EA MY++ +NGYSG P ++ L+ +P+ + L V ++++H Sbjct: 476 LTGPYNLLLRWIPGFQAIRVPSRFSVMVSLSLAILCGLAIT-LLSRSSKLFPGQKWLLAVLLAAILIEEVSFPLPLIPVPHKGQPPPIYSQVSQLPENAALLELPL--PASRLTYS-QEALPMYYSLFHRLKIVNGYSGFIPPAYSMIQEALETFPSEETVSLLHRLNVRFILIH 646
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Match: A0A7W0KA46_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W0KA46_9BACT) HSP 1 Score: 72.4 bits (176), Expect = 7.930e-11 Identity = 71/225 (31.56%), Postives = 106/225 (47.11%), Query Frame = 1 Query: 172 RTGVRTDELLALVTAGAVAAVF-ALGPSPGGVK------GPFRLLHRFVPGFDGIRVTSRFAVISFVAGALLVGLAAQYLIDRAPRARAAWVAPIIAGLVILEV-------------GG--PMARVDVPEGDRLLVYEALADL-DPGVVLELPVRTPDDGVQWAFVEAPRMYHATIDWNDRINGYSGSTPQGFAETAATLQGWP-TPSAENRA-ETLGVTYVILH 771 RTG L L + A++ +LGP P G +R+L+ VPGF+G+RV +R+A+++ V ++ G A A R + W+A I V++E GG P ARV+ P D +VY+ LA + + V+ E P P W E +Y+AT+ W +NGYSG PQ + A LQ P A +A G T++I+H Sbjct: 398 RTGAACRSPLTLAVLLTILAMWLSLGPVPQSHGRTLQGLGLYRVLYDHVPGFEGLRVPARYAMVAAVFLSIAAGYGAA-----AARRTSVWIA--ICAAVLIETAFAPMPLNQTWGDGGVQPPARVE-PASDAPVVYQHLAGMPNATVITEFPFGDP----AW---EIRYVYYATVHWKRLVNGYSGGFPQPYKVRVALLQRVAENPEAAWQALRDTGTTHMIVH 607 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88646.20585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88646.20585.1 >prot_M-pyrifera_M_contig88646.20585.1 ID=prot_M-pyrifera_M_contig88646.20585.1|Name=mRNA_M-pyrifera_M_contig88646.20585.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp LLTPQRDNWFWGSVLDPINSSGKAGEHAYFPGFVALLLAAAGVWIGWRLLback to top mRNA from alignment at M-pyrifera_M_contig88646:43..813- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88646.20585.1 ID=mRNA_M-pyrifera_M_contig88646.20585.1|Name=mRNA_M-pyrifera_M_contig88646.20585.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig88646:43..813- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88646:43..813- >mRNA_M-pyrifera_M_contig88646.20585.1 ID=mRNA_M-pyrifera_M_contig88646.20585.1|Name=mRNA_M-pyrifera_M_contig88646.20585.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig88646:43..813- (Macrocystis pyrifera P11B4 male)back to top |