mRNA_M-pyrifera_M_contig88644.20583.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A6B2L527_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L527_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.640e-28 Identity = 67/177 (37.85%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 AFYFYP-NGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDHLWHLISDGEVVGMFATKDLRVSLAWRERCFKDQDEMRRFHNAPN---MTVDHILDTFHQDLVKRGRLQ-QGQPRPHPREFALLILDEYARYPVDHATQSSLVPWNYCILPRLFP 516 +F F+ NG A P + N VVDG++VVH Y+ P L +P++L Y+GD W + +DGEV + DLRVS+ +R RCF+D +E RRF P +T++ +L DLVKRG L+ + + + +++L Y RYP+ + LVP+NYC LPRL+P Sbjct: 234 SFVFWTDNGRAKAMAPAPRSAN---VVDGSKVVHAAAVYRAGVVPPV-LRPSEPHALVYEGDGRWSIRTDGEVRSRLSDDDLRVSIVYRARCFRDAEEARRFKELPESERLTLEGVLGVLKADLVKRGVLKAEEREGVSAFDLGMMLLKTYTRYPLP---EKGLVPFNYCALPRLYP 403
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A553PRN0_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PRN0_TIGCA) HSP 1 Score: 113 bits (283), Expect = 1.080e-26 Identity = 57/172 (33.14%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 1 AFYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDH-LWHLIS-DGEVVGMFATKDLRVSLAWRERCFKDQDEMRRFH-NAPNMTVDHILDTFHQDLVKRGRLQQGQPRPHPREFALLILDEYARYPVDHATQSSLVPWNYCILPR 507 +F+ YP+G P PS N V+DG +V+HGV R+ P R + K + +G W L++ D EV+G + +LR++L WR CF+ +++ +++ + + L +DL KR L Q Q RP +FAL+++ EY +YP+D+ +++ P NYC+LP Sbjct: 217 SFFLYPDGPGGPVTSFPSNANTGSVLDGIKVIHGVNRFMPG-RVAPNIGKRVAKLVLDEGSQDTWTLVNEDQEVLGKYNMNELRITLVWRSLCFESEEQRSQWNPKSSTFAAEDALQALEKDLRKRNVLAQDQARPEMLDFALMLIKEYIKYPIDNF-ENAWFPLNYCVLPN 386
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: E4XZE0_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XZE0_OIKDI) HSP 1 Score: 108 bits (269), Expect = 8.090e-26 Identity = 56/172 (32.56%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 4 FYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDHLWHLISDGEVVGMFATKDLRVSLAWRERCFKDQDEMRRF--HNAPNMTVDH--ILDTFHQDLVKRGRL--QQGQPRPHPREFALLILDEYARYPVDHATQSSLVPWNYCIL 501 + FYPNG A +P +++DG R++HGVER P + A + K N ++YQG++ W+++++ ++V F T + R++ WR CF+ ++E +F H + H I + DL KRG+L +G P+ FA L+ Y +YP+D + P+NYC L Sbjct: 26 YVFYPNGPGASAQSLPPKRGQAIMMDGGRMIHGVERTGPGYHS-AHMIKGHFNRIEYQGNNTWYVMANDDLVDTFKTDEFRITFVWRSLCFRSEEEKIKFDKHIEEKEFIPHEEIFEKLEADLRKRGKLGENKGIKTMGPKAFAKLLQHVYMQYPLD--VPDAWFPFNYCAL 194
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A814HMA8_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814HMA8_9BILA) HSP 1 Score: 105 bits (263), Expect = 1.010e-23 Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 1 Query: 4 FYFYPN-GNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDH-LWHLISDGEV-VGMFATKDLRVSLAWRERCFKDQDEMRRFHNAPN---MTVDHILDTFHQDLVKRGR-LQQGQPRPHPREFALLILDEYARYPVDHATQSSLVPWNYCILPRLFP 516 FYFYP V S N+ L+VDGT+VVHGVER+K +F L+K+K L Y+ + W L + + + DLRVSL WR CFKD DE ++ N N ++V+ +LD F D+ R + L + EF + +++EY+ Y + Q+ L +NYC++P + P Sbjct: 246 FYFYPYVEEKEKFVLAKSEYNSALLVDGTQVVHGVERFKSEFEQPP-LEKNKKYYLSYEANEDSWGLYDQNDKKIKEYKNDDLRVSLVWRVHCFKDMDEKVKYDNQKNDDRLSVETVLDIFKNDMKARNKNLDENMSN---LEFLIKLIEEYSVY--SNKIQNGLPVFNYCLIPLVMP 417
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A534XA98_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534XA98_9DELT) HSP 1 Score: 89.4 bits (220), Expect = 4.610e-18 Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 4 FYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDHLWHLISDGE-VVGMFATKDLRVSLAWRERCFKDQDEMRRFH-NAPNMTVDHILDTFHQDLVKRGRLQQGQPRPHPREFALLILDEYARYP 450 F FYP G PA +P+ N +++D V HGV+ + D P+ L +P ++ + DH L+ DG+ VV + ++R S++W+ CF D +E R + + ++ ++ I+D +DL RGRL++ RP AL+++DEY ++P Sbjct: 186 FAFYPQGGDGPAATIPARTNTGIILDTDSVFHGVDPVESDS-PLPAL---RPG-MRLRWDHGRWLVHDGDAVVARYPWDEIRFSISWKAYCFTDAEERRAWREHREDLVLERIVDRLVEDLRARGRLERE--RPDQTSLALMLIDEYVKFP 329
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A6G0V1A0_9BILA (Uncharacterized protein n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V1A0_9BILA) HSP 1 Score: 84.7 bits (208), Expect = 4.420e-16 Identity = 49/179 (27.37%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 4 FYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDHLWHLISDGEVVGMFATKDLRVSLAWRERCFKDQDEMRRFHNAPNMTVDH-------ILDTFHQDLVKRGRLQQGQ-PRPHPREFALLILDEYARYPVDHATQSSLVPWNYCILPRLFP 516 F +YP + P P + +VDG + +H YK P L K N L+Y G+ W L S+ + + TKDLR+++ +R RCF+ + + + H IL+ +L KR + E A++ ++E+ RYP+ +++P+NYC+L +FP Sbjct: 252 FAYYPKNDIRPTYVQPFP-RSATIVDGAKTIHAATLYKQKNTPPI-LPKSADNVLEYVGNDSWTLFSNKNPLRSYKTKDLRITVVYRARCFESEAKKEAYKKWFTTAEKHEVRPVQEILNELKTELSKRKNIPVSDLDGISAVELAIMFVEEFIRYPLPG---KAMIPYNYCVLDTMFP 425
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: X6M3J5_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6M3J5_RETFI) HSP 1 Score: 79.7 bits (195), Expect = 1.150e-15 Identity = 46/156 (29.49%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 94 VHGVERYKPDFRPIARLDKDKPNSLQY-QGDHLWHLISDGEVVGM-FATKDLRVSLAWRERCFKDQDEMRRFHN---APNMTVDHILDTFHQDLVKRGRLQQGQPR----PHPR------EFALLILDEYARYPVDHATQSSLVPWNYCILPRLFP 516 +H V ++P P++ DKD +L+Y + D WH + G + ++R S+A+R CFK+++E +F +T+D ++D ++L+ +G + + + R P+ + E LL+LD Y + P H S +P+NYC+L +LFP Sbjct: 1 MHCVVCFRPHIPPLS-FDKDASAALKYNKSDKKWHAFVNNNATGAEYRWNEIRASVAYRGWCFKNKEEADKFDPKEFTSKLTLDMVIDRLTENLISKGLVTREKVRELKQPNTKDKNNAYELGLLLLDNYIKLPYPHG---SYIPYNYCLLFKLFP 152
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Match: A0A812GB88_9DINO (FolD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812GB88_9DINO) HSP 1 Score: 72.0 bits (175), Expect = 1.070e-11 Identity = 33/97 (34.02%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 4 FYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKDKPNSLQYQGDHLWHLISDGEVVGMFATKDLRVSLAWRERCFKDQDEM 294 F +Y +A P + L+ + VDG++ +H ++P + LDKDK N+L Y GD W L S+GEV+ ++ + DLR+++ +R RCF ++++ Sbjct: 257 FLYYDQNSATPKAVLSKPLSG-VAVDGSKTLHAAGVFRPSVK-APLLDKDKDNALFYVGDEKWQLRSNGEVLQIYNSSDLRMTIVYRARCFASEEDL 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88644.20583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88644.20583.1 >prot_M-pyrifera_M_contig88644.20583.1 ID=prot_M-pyrifera_M_contig88644.20583.1|Name=mRNA_M-pyrifera_M_contig88644.20583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp AFYFYPNGNAHPAVKVPSALNNMLVVDGTRVVHGVERYKPDFRPIARLDKback to top mRNA from alignment at M-pyrifera_M_contig88644:301..816- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88644.20583.1 ID=mRNA_M-pyrifera_M_contig88644.20583.1|Name=mRNA_M-pyrifera_M_contig88644.20583.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig88644:301..816- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88644:301..816- >mRNA_M-pyrifera_M_contig88644.20583.1 ID=mRNA_M-pyrifera_M_contig88644.20583.1|Name=mRNA_M-pyrifera_M_contig88644.20583.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig88644:301..816- (Macrocystis pyrifera P11B4 male)back to top |