mRNA_M-pyrifera_M_contig8864.20581.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI) HSP 1 Score: 213 bits (541), Expect = 2.590e-68 Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1 Query: 1 ESGGPQDPYSDASAKYGPLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 ESGG QDPYSDASAKYGPLKLP+LQNVDL KMYGGAAQGKEP+YLDYNIKGR F+ER PYNAGA Y+ GI GGGA GVREGFAKAPNRRSRVLLNS+MNHAGKKGS YGNTFAVL Sbjct: 8 ESGGVQDPYSDASAKYGPLKLPELQNVDLSKMYGGAAQGKEPEYLDYNIKGRGFWERMPYNAGALYITGILGGGAAGVREGFAKAPNRRSRVLLNSIMNHAGKKGSFYGNTFAVL 122
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A835Z638_9STRA (Mitochondrial import inner membrane translocase subunit TIM23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z638_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.310e-34 Identity = 66/118 (55.93%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 10 GPQDPYSDASAKYGPLKLPQLQ--NVDLGK---MYGGAAQGK-EPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 G DPY+D AK+G L+LP+L ++DLG MYG G EPDYLDYNIKGR FE+T YN G YLAGI GGG GV EG AP+ R+R+ +N+++N AGK+GS GNT AVL Sbjct: 11 GDNDPYTDPGAKFGRLELPKLNTSSIDLGSLAGMYGVQGGGAYEPDYLDYNIKGRDTFEKTTYNTGMCYLAGIIGGGGYGVLEGARTAPSSRARIRVNAILNAAGKRGSRAGNTLAVL 128
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S1VVP8_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVP8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.110e-20 Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 52 PLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 PL N+ LG + ++PDYLDY+ KGR NAG YL G F GGA G+REGF +P++R RV LNS++NH G+ GS +GN+ V+ Sbjct: 18 PLPDFSTANIQLGTVAPALGVPQQPDYLDYDQKGRGIVVTMFANAGMSYLLGTFAGGAYGLREGFIHSPSQRFRVKLNSILNHCGRHGSRWGNSLGVV 115
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A6U5ID74_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5ID74_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.600e-20 Identity = 51/105 (48.57%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 49 GPLKLPQLQ---NVDLGKM---YGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 GP P L N+ LG + G EPDYLDYN+KGR E+ N GA Y+ F GGAMG+R G A PN R RV LNSV+NH K GS GN VL Sbjct: 14 GPPLPPSLMGGANIQLGTVAPALGTIGYAPEPDYLDYNLKGRGVSEKMFANTGASYVIATFIGGAMGLRSGLAATPNSRMRVKLNSVLNHCSKIGSKSGNAVGVL 118
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S2QVE9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVE9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.680e-18 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 52 PLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGN 330 P LP L +DL ++ GG EP+YLDY+IKGR +++RT + G YL G GG GV+ G + PN R +V +N+++NH+G+ GS GN Sbjct: 8 PPTLPSLDGIDLRRVAGGITS--EPEYLDYDIKGRGWWDRTVSSTGWGYLIGTGVGGIYGVKTGMSSVPNSRFKVKVNALLNHSGRYGSRVGN 98
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S2WJK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJK1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 8.660e-18 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 19 DPYSDASAKYGPLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 +P +++ A P +P L LG ++G EPDYL+Y++KGRS+FE+ +N G Y+ G G G G A AP+ + RV +N+++N AGK GS GN VL Sbjct: 3 EPMAESEA---PAPIPHLDAPALGGIFGRPGVD-EPDYLEYDLKGRSYFEKLFFNTGLSYMIGSASGSLYGATSGLANAPSSKFRVKVNALLNGAGKYGSRGGNALGVL 107
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.170e-17 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 58 KLPQLQNVDLG---KMYGGAAQGK--EPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTF 336 +LP + +D + GG + G EP+YLDY IK R E G YLAG+ GGG +G+ EG +P+ R R+L NS+MN+AGK+GS GN F Sbjct: 12 ELPPIPGIDFTLKQPIGGGLSTGSRYEPEYLDYTIKSRGPLENVFSYCGTAYLAGVIGGGGVGLMEGVRSSPSSRFRILFNSIMNNAGKRGSRAGNAF 109
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S2S630_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S630_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.900e-17 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 19 DPYSDASAKYGPLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 +P +++ A P +P L LG ++G EPDYL+Y++KGRS+FE+ +N G Y+ G G G G A AP+ + RV +N+++N AGK GS GN VL Sbjct: 3 EPMAESEA---PAPIPHLDAPALGGIFGRPGVD-EPDYLEYDLKGRSYFEKLFFNTGLSYMIGSASGSLYGATSGLANAPSSKFRVKVNALLNGAGKYGSRGGNALGVL 107
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A4D9D4E0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E0_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 6.360e-17 Identity = 47/92 (51.09%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 76 NVDL---GKMYGGAAQGKEPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAV 342 NVDL +YG A++ +EPDYLDY+IKGR ER +G+ YL GI GG +G R G+ AP+ R + LNSVMN AGK GS +GN V Sbjct: 27 NVDLRTVAPLYGVASE-EEPDYLDYDIKGRGTVERMFLYSGSSYLTGILTGGILGGRTGWKTAPSPRFWLRLNSVMNGAGKLGSKWGNNAGV 117
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Match: A0A7S2A828_TRICV (Hypothetical protein n=3 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A828_TRICV) HSP 1 Score: 83.2 bits (204), Expect = 1.130e-16 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 121 EPDYLDYNIKGRSFFERTPYNAGAFYLAGIFGGGAMGVREGFAKAPNRRSRVLLNSVMNHAGKKGSLYGNTFAVL 345 +PDYLDY+ KGR NAG YL GIFGGG G+REG + P+ R +V LNSV+NH G+ GS GN VL Sbjct: 161 QPDYLDYDTKGRGVVVTMFANAGVSYLMGIFGGGLYGLREGLTQTPSSRFKVKLNSVLNHCGRHGSRAGNVLGVL 235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8864.20581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8864.20581.1 >prot_M-pyrifera_M_contig8864.20581.1 ID=prot_M-pyrifera_M_contig8864.20581.1|Name=mRNA_M-pyrifera_M_contig8864.20581.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp ESGGPQDPYSDASAKYGPLKLPQLQNVDLGKMYGGAAQGKEPDYLDYNIKback to top mRNA from alignment at M-pyrifera_M_contig8864:96..1638- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8864.20581.1 ID=mRNA_M-pyrifera_M_contig8864.20581.1|Name=mRNA_M-pyrifera_M_contig8864.20581.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1543bp|location=Sequence derived from alignment at M-pyrifera_M_contig8864:96..1638- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8864:96..1638- >mRNA_M-pyrifera_M_contig8864.20581.1 ID=mRNA_M-pyrifera_M_contig8864.20581.1|Name=mRNA_M-pyrifera_M_contig8864.20581.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig8864:96..1638- (Macrocystis pyrifera P11B4 male)back to top |