mRNA_M-pyrifera_M_contig88635.20579.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A5A8DTK3_CAFRO (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTK3_CAFRO) HSP 1 Score: 246 bits (629), Expect = 2.610e-80 Identity = 112/164 (68.29%), Postives = 140/164 (85.37%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGAK +YAS R AI+ A+ TM+ASADVLALAS+EVD+ +IP +TVTVKWRGKPVFIR+R+ +Q+ E + TPAGLRDP DAERT+ P WL+++GICTHLGCVPM++ GDY GW+CPCH SHYDGSGRIR+GPAPLNLE+PPYKF+ ++ ++LG Sbjct: 80 RAFTYFVLGGAKFVYASTVRFAIVNALATMSASADVLALASVEVDLGAIPLSETVTVKWRGKPVFIRNRTEEQIAECAD-TPAGLRDPQTDAERTENPKWLVILGICTHLGCVPMSNAGDYNGWYCPCHGSHYDGSGRIRRGPAPLNLEIPPYKFVGEDKLILG 242
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A812MJ19_9DINO (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MJ19_9DINO) HSP 1 Score: 238 bits (607), Expect = 3.200e-77 Identity = 108/164 (65.85%), Postives = 137/164 (83.54%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ LYASA R+A++R + T++ASADVLALA+LEVD+ ++ G+ +TVKWRGKPVF++HR+ Q+ EV+ GLRDP DAERTQ P WL+V+GICTHLGCVP+A+ G++ GWFCPCH SHYDGSGRIRQGPAPLNLEVPPYKF+ + ++LG Sbjct: 62 RAFTYFVLGGARFLYASAVRVAVVRTLATLSASADVLALANLEVDLKAVQPGECITVKWRGKPVFVKHRTEDQIAEVAAPL-QGLRDPQTDAERTQDPKWLVVLGICTHLGCVPIANAGNFKGWFCPCHGSHYDGSGRIRQGPAPLNLEVPPYKFVGGDKLILG 224
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: W2M1B7_PHYPR (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=10 Tax=Peronosporaceae TaxID=4777 RepID=W2M1B7_PHYPR) HSP 1 Score: 237 bits (605), Expect = 4.800e-77 Identity = 107/164 (65.24%), Postives = 137/164 (83.54%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ YA+AAR+A+++ V +M+ASADVLALA+ E D+SSI G TVTVKWRGKP+FI+HR+ K+++ + + LRDP DA R QKP+WL+V+G+CTHLGCVP +D G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI+D+ +LLG Sbjct: 52 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSSINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVSNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDDKILLG 215
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: M4B2Y1_HYAAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2Y1_HYAAE) HSP 1 Score: 234 bits (598), Expect = 5.940e-76 Identity = 106/164 (64.63%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ YA+AAR+A+++ V +M+ASADVLAL++ E D+S+I G TVTVKWRGKP+FI+HR+ K+++ + LRDP DA R QKP+WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI+DN VLLG Sbjct: 54 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALSTAEFDLSNISEGSTVTVKWRGKPIFIKHRTAKEIDISEQVDVSHLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDNKVLLG 217
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: H3GII1_PHYRM (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3GII1_PHYRM) HSP 1 Score: 234 bits (596), Expect = 1.160e-75 Identity = 104/164 (63.41%), Postives = 136/164 (82.93%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ YA+AAR+A+++ V +M+ASADVLALA+ E D+S+I G TVTVKWRGKP+FI+HR+ K+++ + LRDP DA R QKP+WL+V+G+CTHLGCVP +D G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPY+F+++N +LLG Sbjct: 53 RAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVGNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYEFLEENKILLG 216
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A2D4CB52_PYTIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB52_PYTIN) HSP 1 Score: 233 bits (594), Expect = 2.660e-75 Identity = 106/164 (64.63%), Postives = 135/164 (82.32%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ YA+AAR+A+I+ V +M+ASADVLALA+ E D+S+I G TVTVKWRGKP+FI+HRS K++ + + LRDP DAER + P WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPY+FI+DN +LLG Sbjct: 57 RAFTYFMLGGARVAYATAARLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRSEKEIALSNDVNLSNLRDPETDAERVKDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQFIEDNKILLG 220
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A5D6XVF7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF7_9STRA) HSP 1 Score: 232 bits (591), Expect = 6.880e-75 Identity = 105/164 (64.02%), Postives = 134/164 (81.71%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYFLLGGA+ YA+A R+A+I+ V +M+ASADVLALA+ E D+S+I G TVTVKWRGKP+FI+HR+ K++E + + LRDP DA R Q P WL+V+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKF+++N +LLG Sbjct: 54 RAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEIELSNAVNVSNLRDPETDAVRVQDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFLENNKILLG 217
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: A0A7S3K5M4_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5M4_9STRA) HSP 1 Score: 230 bits (586), Expect = 4.090e-74 Identity = 106/164 (64.63%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 R TY ++G K +YASA RIA I+ + +M AS DVLALAS E DVS++ AG+T+TVKWRGKPVFIRHR+ ++V E G + LRDP DA+R Q+ DWL+VMGICTHLGCVP+A+ G+Y GWFCPCH SHYD SGRIR+GPAPLNLEVPPYKF+D + +L+G Sbjct: 55 RGFTYLVMGANKFIYASAVRIAAIKFIASMAASKDVLALASAEFDVSAVEAGKTITVKWRGKPVFIRHRTSEEVAEAEGVSLDALRDPQSDADRVQEKDWLVVMGICTHLGCVPIANAGEYNGWFCPCHGSHYDVSGRIRKGPAPLNLEVPPYKFLDSDKLLVG 218
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: F0W758_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Albugo TaxID=65356 RepID=F0W758_9STRA) HSP 1 Score: 229 bits (585), Expect = 6.200e-74 Identity = 103/164 (62.80%), Postives = 135/164 (82.32%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYF+LGGA+ +YA+AAR+A+I+ V +M+ASADVLALA+ E D+SSI G TVTVKWRGKP+FI+HR+ +++E + + LRDP D R + P WL+V+G+CTHLGCVP+++ GDY GWFCPCH SHYD SGRIR+GPAPLNLE+PPY+F++DN +LLG Sbjct: 57 RAFTYFVLGGARIMYATAARLAVIKFVGSMSASADVLALATAEFDLSSIDEGATVTVKWRGKPIFIKHRTDQEIESANDVPVSSLRDPETDDVRVKDPKWLVVLGVCTHLGCVPISNAGDYKGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQFLEDNKILLG 220
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Match: K3WIU0_GLOUD (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU0_GLOUD) HSP 1 Score: 229 bits (583), Expect = 1.130e-73 Identity = 106/164 (64.63%), Postives = 132/164 (80.49%), Query Frame = 1 Query: 1 RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPAGQTVTVKWRGKPVFIRHRSPKQVEEVSGGTPAGLRDPADDAERTQKPDWLIVMGICTHLGCVPMADMGDYGGWFCPCHASHYDGSGRIRQGPAPLNLEVPPYKFIDDNTVLLG 492 RA TYFLLGGA+ YA+A R+A+I+ V +M+ASADVLALA+ E D+S+I G TVTVKWRGKP+FI+HR+ K++ + A L+DP D R Q P WLIV+G+CTHLGCVP ++ G+YGGWFCPCH SHYD SGRIR+GPAPLNLE+PPYKFI++N VLLG Sbjct: 54 RAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEITISNEVNVANLKDPETDDVRVQNPKWLIVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEENKVLLG 217 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88635.20579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88635.20579.1 >prot_M-pyrifera_M_contig88635.20579.1 ID=prot_M-pyrifera_M_contig88635.20579.1|Name=mRNA_M-pyrifera_M_contig88635.20579.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp RASTYFLLGGAKALYASAARIAIIRAVTTMTASADVLALASLEVDVSSIPback to top mRNA from alignment at M-pyrifera_M_contig88635:2..496+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88635.20579.1 ID=mRNA_M-pyrifera_M_contig88635.20579.1|Name=mRNA_M-pyrifera_M_contig88635.20579.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig88635:2..496+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88635:2..496+ >mRNA_M-pyrifera_M_contig88635.20579.1 ID=mRNA_M-pyrifera_M_contig88635.20579.1|Name=mRNA_M-pyrifera_M_contig88635.20579.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig88635:2..496+ (Macrocystis pyrifera P11B4 male)back to top |