mRNA_M-pyrifera_M_contig88098.20464.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88098.20464.1
Unique NamemRNA_M-pyrifera_M_contig88098.20464.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A2E3MIB1_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MIB1_9GAMM)

HSP 1 Score: 295 bits (754), Expect = 2.380e-95
Identity = 154/250 (61.60%), Postives = 193/250 (77.20%), Query Frame = 1
Query:   73 AISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            A++  R+L II L   FL R I+Q +   L    +   + DKTTI +LGK+ K  V+  A L+ALQT  I I+G+LAFGGIG AA+AFSAKDLLANFFGG++I++D+PF++GDWIRSPDR+IEG VE IGWR+ +IRTFDKRPL+VPNS+F  I +ENPSRM+NRRIKT+IG+RY DASK+  IL ++E ML+ HPDID +Q LMV LVEF  SSL FM+YTFTKTT W  +Q VQQDVFLK I II+ +
Sbjct:   99 AVNTVRNLGIIALFAWFLLRLISQAEEHCLEG-RMGSKRLDKTTINALGKITKASVMITAALVALQTLGIGISGVLAFGGIGGAAVAFSAKDLLANFFGGLIIYLDRPFAVGDWIRSPDRNIEGTVEHIGWRLCRIRTFDKRPLYVPNSLFTMISIENPSRMTNRRIKTNIGLRYDDASKVGDILPAVEAMLRNHPDIDTSQTLMVNLVEFGASSLNFMIYTFTKTTNWERYQAVQQDVFLKTIDIIEAH 347          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A2E2TJB3_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TJB3_9GAMM)

HSP 1 Score: 289 bits (739), Expect = 1.960e-93
Identity = 152/268 (56.72%), Postives = 197/268 (73.51%), Query Frame = 1
Query:   10 LGGFFLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGII 813
            LG     +++  SG Q  + T + P R L II L    L RF+N+ ++ Y    H    K DKTT  +L K+ K  V+  A+L+ LQ+  I I+G++AFGGI  AA+AF+AKDLLANFFGG++I++D+PF++GDWIRSPDR+IEG VE IGWR+ +IRTFD RPL+VPNS+F+ I +ENPSRM NRRI T+IG+RY+DA+++  IL  IE MLK HP+I +NQ LMV LV+F PSSL FM+Y FTKTT WV FQ +QQDVFLKII II
Sbjct:   75 LGISIAADIVGISGKQAIIFTIVQPVRVLGIIALFAWALIRFVNEAEIHYSAGHH---KKIDKTTANALAKITKASVIVTAVLVGLQSVGIGISGVVAFGGIXGAAVAFAAKDLLANFFGGLIIYLDRPFAVGDWIRSPDRNIEGTVEYIGWRLCRIRTFDLRPLYVPNSLFSTISIENPSRMINRRINTNIGVRYKDATRMADILTDIETMLKQHPEIAINQTLMVNLVKFGPSSLEFMIYCFTKTTDWVSFQAIQQDVFLKIIEII 339          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A0S7Y064_9COXI (Mechanosensitive ion channel protein MscS n=1 Tax=Coxiella sp. DG_40 TaxID=1703354 RepID=A0A0S7Y064_9COXI)

HSP 1 Score: 284 bits (726), Expect = 1.870e-91
Identity = 145/274 (52.92%), Postives = 199/274 (72.63%), Query Frame = 1
Query:    1 ILALGGFFLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            I  LG  F  E++        +   I+P R   I++++  FL RF++ ++  ++     +    DKTTI++L ++ +  V+  A+L+ LQ F I I+G+LAFGGIG  AI F+AKD+LANFFGG+MI++D+PFS+GDWIRSPD+ IEGMVE IGWR+T+IRTFDKRPL VPN VF+ I +ENPSRM+NRRI+  I +RY DA+KI  IL  IE+ML+ HP+ID ++ LMV LVE A  SL FM+YTFTKTT WV+FQ VQQDVF+K++ I+ ++
Sbjct:   68 IWVLGVSFAAEIVSVYAKNKMIFDLITPVREFAILIILGWFLIRFVSCIEKEFIARKIKETQGVDKTTIHALCQLLRAAVVITAVLVGLQIFGIPISGVLAFGGIGGIAIGFAAKDMLANFFGGLMIYLDRPFSVGDWIRSPDKEIEGMVEHIGWRLTRIRTFDKRPLFVPNGVFSTISVENPSRMTNRRIRAIINLRYDDATKIAVILKDIEQMLRSHPEIDTDRTLMVNLVECASWSLNFMIYTFTKTTDWVKFQAVQQDVFIKVLEIVAQH 341          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A845JQF1_9BACT (Mechanosensitive ion channel family protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845JQF1_9BACT)

HSP 1 Score: 283 bits (723), Expect = 4.260e-91
Identity = 146/267 (54.68%), Postives = 191/267 (71.54%), Query Frame = 1
Query:   22 FLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            F  E+I ++ T   +  A  P R+ +II  +  F+   +  ++  YL          D TT+ ++ K+A   V  IA LM LQT   SI+G+LAFGGIG  A+ F+AKDLL+NFFGG +I+MD+PF++GDWIRSPDR IEG VE+IGWRIT+IRTFDKRPL++PNS+F+ I +ENPSRMSNRRIK  IG+RY DASKIE I+  ++EML+ HPDID N+ L+V    FAPSSL F +YTFTKTT W+EF  V+QDV LKI+ I++ N
Sbjct:   73 FAAEIIQNA-TNAKIFEAFYPLRNAIIIAALARFIILVLRHIEKAYLS----KGDTLDPTTVDAISKLASISVFIIAALMILQTMGFSISGVLAFGGIGGLAVGFAAKDLLSNFFGGFIIYMDRPFAVGDWIRSPDREIEGTVEKIGWRITRIRTFDKRPLYIPNSIFSQISVENPSRMSNRRIKETIGLRYDDASKIEPIIKQVKEMLQNHPDIDTNKTLIVNFNSFAPSSLDFFIYTFTKTTDWIEFHDVKQDVLLKIVNIVEEN 334          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A6L8EJR7_9GAMM (Mechanosensitive ion channel family protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJR7_9GAMM)

HSP 1 Score: 275 bits (703), Expect = 2.780e-89
Identity = 135/249 (54.22%), Postives = 182/249 (73.09%), Query Frame = 1
Query:   76 ISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            + P R++ +I     FL RFIN+ +  YL L        D+TT  ++ K+ +  ++ IA L+ LQT   S+ G+LAFGG+G   + F+A+DLLANFFGG+MI+MD+PF +GDWIRSPD+ IEG VE IGWR+T+IRTFDKRPL+VPNSVF NI +ENP RM+NRRI   IGIRY+DA ++ AI   +++ML+ HP+ID  Q ++V  VEFAPSSL F VYTFTKTT W+ F  +++DV LKI+ II++N
Sbjct:    1 VEPLRNVGVISSFAWFLTRFINRAEAHYLKLRSEAGEPFDRTTADAIAKLLRITIIVIAFLILLQTLGFSVAGVLAFGGVGGIVVGFAARDLLANFFGGLMIYMDRPFEVGDWIRSPDKEIEGTVENIGWRLTRIRTFDKRPLYVPNSVFTNIAVENPQRMTNRRIYETIGIRYEDAGRMAAITRDVKQMLREHPEIDTRQTMIVNFVEFAPSSLDFFVYTFTKTTEWIRFHEIKEDVMLKILEIIEKN 249          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A8J7FD38_9GAMM (Mechanosensitive ion channel family protein n=1 Tax=Pontibacterium sp. N1Y112 TaxID=2781979 RepID=A0A8J7FD38_9GAMM)

HSP 1 Score: 276 bits (706), Expect = 1.960e-88
Identity = 135/262 (51.53%), Postives = 196/262 (74.81%), Query Frame = 1
Query:   37 IHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            + + G  LP   ++S  R L++IV ++ F+ RFI +++L  +      +   D TT+ +LG++ +  VL +A+L+ LQ   IS++G+LAFGGIG  A+ F+AKDLLANFFGG+MI++D+PF +GDWIRSPD+ IEG+VE+IGWR T+IRTF KRPL+VPN+ F NI +ENPSRM+NRRI  +IG+RY DA +++ I+ ++ +ML+ HPDID NQ L+V L  F PSSL F +YTFTKTT WV + G++QDV +K++GI+++ 
Sbjct:   82 VSNGGLVLP--ESVSTVRKLMLIVALSWFVVRFIGRIELVLMQA-GAKRKAMDVTTVRALGRLLRLAVLVLAVLIVLQNLGISVSGILAFGGIGGLAVGFAAKDLLANFFGGLMIYLDRPFKVGDWIRSPDQEIEGVVEDIGWRQTRIRTFSKRPLYVPNATFANISVENPSRMTNRRIYEYIGVRYGDAQRVQLIIENVRQMLQDHPDIDTNQTLIVNLDRFGPSSLDFFIYTFTKTTDWVAYHGIKQDVMMKVMGIVEQE 340          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A2E6HP35_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E6HP35_9GAMM)

HSP 1 Score: 276 bits (705), Expect = 2.690e-88
Identity = 140/261 (53.64%), Postives = 190/261 (72.80%), Query Frame = 1
Query:   40 HHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
             H+G+ +    A+SP   + +++++  FL RFI   +   +        + D+TTI ++ K+ +  V+ I  L+ALQ+   SI+G+LAFGG+G  A+ F+A+DLLANFFGG+MI+MD+PF++GDWIRSPD+ IEG VE+IGWR+T IRTFDKRPL+VPNSVFNNI +ENPSRMSNRRIK  IGIRY D SK+E I+  ++ MLK H DID  +IL+V   EFAPSSL F +YTFTKTT WV +  ++QD+ L +I II+ N
Sbjct:   85 EHTGSII--FGAVSPLYQIGVLIVIGWFLIRFITYAESNIISTKQSAGEEIDQTTIDAIAKLLRISVIIIGFLVALQSLGFSISGVLAFGGVGGIAVGFAARDLLANFFGGLMIYMDRPFNVGDWIRSPDKEIEGTVEKIGWRLTTIRTFDKRPLYVPNSVFNNISVENPSRMSNRRIKETIGIRYDDLSKMEKIIDDVKRMLKNHSDIDTTKILIVNFDEFAPSSLDFFIYTFTKTTDWVRYHEIKQDILLNVIKIIESN 343          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A0W0YYN0_LEGSP (Small-conductance mechanosensitive channel n=2 Tax=Legionella spiritensis TaxID=452 RepID=A0A0W0YYN0_LEGSP)

HSP 1 Score: 275 bits (702), Expect = 6.550e-88
Identity = 137/231 (59.31%), Postives = 176/231 (76.19%), Query Frame = 1
Query:  130 RFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            RFI  ++  Y+     +  + DKT I+++ ++A  +V  I+IL+ LQ F + I+GLLAFGGIG AA+AF+++DLLANFFGG++I+MD+PF +GDWIRSPD+ IEG VE IGWR+T+IRTFDKRPL+VPN +F  I +EN SRM NRRIKT+I IRYQDA K++AI   +  ML+ HP+ID  Q L+V  VEF PSSL FMVYTFTKTT WV FQ VQ DVF+KI+ II  N
Sbjct:  108 RFIRNLETLYIRSCVENSKEVDKTMIHAVSQLATIVVAVISILITLQCFGLPISGLLAFGGIGGAAVAFASRDLLANFFGGLVIYMDRPFKVGDWIRSPDKQIEGTVEYIGWRVTRIRTFDKRPLYVPNGLFLTISVENASRMLNRRIKTNIAIRYQDADKMDAITNQVRHMLQEHPEIDTRQTLIVNFVEFGPSSLNFMVYTFTKTTNWVHFQAVQHDVFMKILRIIAAN 338          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A2E0PX06_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PX06_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 7.180e-88
Identity = 140/271 (51.66%), Postives = 194/271 (71.59%), Query Frame = 1
Query:   10 LGGFFLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            +G  F  ++I +    + +  AI+P R + +IV ++ FL RF+ + ++ +           DKTT+ ++ K+ +  ++  A L+ +QT   S++G+LAFGGIG  AI F+A+DLLANFFGG MI+MD+PF +GDWIRSPD+ IEG VE+IGWR+T IRTF+KRPL+VPN++F +I +ENPSRMSNRRIK  IGIRY D  K+E I+  ++EMLK H DID NQ L+V   EFAPSSL F +YTFTKTT W++F  V+Q+V LKII II+ +
Sbjct:   74 IGLTFAADIIKNENDAI-IFGAIAPIRDVGVIVAISWFLVRFVGRAEINFSKKKQSQGVDFDKTTVDAIAKLLRISIIITAALVTMQTLGYSVSGVLAFGGIGGIAIGFAARDLLANFFGGFMIYMDRPFDVGDWIRSPDKEIEGTVEKIGWRLTTIRTFEKRPLYVPNAIFTSIAVENPSRMSNRRIKETIGIRYDDVVKMEDIVTEVKEMLKEHDDIDANQTLIVNFNEFAPSSLDFFIYTFTKTTNWIKFHEVKQNVLLKIIKIIESH 343          
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Match: A0A7R6P310_9GAMM (MscS family membrane protein n=1 Tax=Amphritea japonica ATCC BAA-1530 TaxID=1278309 RepID=A0A7R6P310_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 7.640e-88
Identity = 146/276 (52.90%), Postives = 199/276 (72.10%), Query Frame = 1
Query:    1 ILALGGFFLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVKLGYLHLLHLDKTKA--DKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLLAFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMVEEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQDASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKTTRWVEFQGVQQDVFLKIIGIIKRN 822
            I  LG    +EL+      L L+TA+SP R +++IV++  FL RFI Q +     L+  DK K   D+TT+ ++GK+ +  ++  + L+ LQ+   SI+G+LAFGGIG  A+ F+AKDLLANFFGG+MI++D+PF +GDWIRSPD+ IEG VE IGWR + IRTFDKRPL+VPN+ F NI +ENPSRM+NRRI   IG+RY+D+S+I A++ ++ EML+ HPDID  Q L+V L  F PSSL F +YTFTKTT WVEF G++QDV  +II I+  +
Sbjct:   73 IWVLGLSLSLELMKLQSDSL-LLTAVSPVRKVLVIVMIAWFLIRFIRQAEGA---LVSKDKVKKPMDQTTVGAIGKLLRLSIIITSTLVVLQSLGYSISGVLAFGGIGGIAVGFAAKDLLANFFGGLMIYLDRPFKVGDWIRSPDQEIEGTVEAIGWRQSCIRTFDKRPLYVPNATFANISVENPSRMTNRRIYETIGLRYEDSSRISAVVDAVREMLQNHPDIDAKQTLIVNLNSFGPSSLDFFIYTFTKTTNWVEFHGIKQDVMGRIITIVHEH 344          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88098.20464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MIB1_9GAMM2.380e-9561.60Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A2E2TJB3_9GAMM1.960e-9356.72Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A0S7Y064_9COXI1.870e-9152.92Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A845JQF1_9BACT4.260e-9154.68Mechanosensitive ion channel family protein n=1 Ta... [more]
A0A6L8EJR7_9GAMM2.780e-8954.22Mechanosensitive ion channel family protein (Fragm... [more]
A0A8J7FD38_9GAMM1.960e-8851.53Mechanosensitive ion channel family protein n=1 Ta... [more]
A0A2E6HP35_9GAMM2.690e-8853.64Mechanosensitive ion channel protein MscS n=2 Tax=... [more]
A0A0W0YYN0_LEGSP6.550e-8859.31Small-conductance mechanosensitive channel n=2 Tax... [more]
A0A2E0PX06_9GAMM7.180e-8851.66Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A7R6P310_9GAMM7.640e-8852.90MscS family membrane protein n=1 Tax=Amphritea jap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88098contigM-pyrifera_M_contig88098:3..824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score273.9
Seed ortholog evalue8.4e-71
Seed eggNOG ortholog1278309.KB907101_gene639
Preferred nameynaI
KEGG koko:K16052
KEGG TC1.A.23.4
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944
EggNOG free text desc.mechanosensitive ion channel
EggNOG OGs1MXD2@1224,1RNUB@1236,1XH2C@135619,COG0668@1,COG0668@2
COG Functional cat.M
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size822
Cds size822
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.5810356-CDS-M-pyrifera_M_contig88098:2..8241622816790.5810356-CDS-M-pyrifera_M_contig88098:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88098 3..824 +
1692278180.1163528-CDS-M-pyrifera_M_contig88098:2..8241692278180.1163528-CDS-M-pyrifera_M_contig88098:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88098 3..824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88098.20464.1prot_M-pyrifera_M_contig88098.20464.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88098 3..824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88098.20464.1

>prot_M-pyrifera_M_contig88098.20464.1 ID=prot_M-pyrifera_M_contig88098.20464.1|Name=mRNA_M-pyrifera_M_contig88098.20464.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
ILALGGFFLIELIHHSGTQLPLMTAISPARSLVIIVLMTLFLWRFINQVK
LGYLHLLHLDKTKADKTTIYSLGKVAKTLVLFIAILMALQTFHISITGLL
AFGGIGTAAIAFSAKDLLANFFGGVMIFMDKPFSIGDWIRSPDRHIEGMV
EEIGWRITKIRTFDKRPLHVPNSVFNNILLENPSRMSNRRIKTHIGIRYQ
DASKIEAILISIEEMLKVHPDIDVNQILMVKLVEFAPSSLTFMVYTFTKT
TRWVEFQGVQQDVFLKIIGIIKRN
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mRNA from alignment at M-pyrifera_M_contig88098:3..824+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88098.20464.1 ID=mRNA_M-pyrifera_M_contig88098.20464.1|Name=mRNA_M-pyrifera_M_contig88098.20464.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig88098:3..824+ (Macrocystis pyrifera P11B4 male)
ATTCTCGCATTGGGTGGATTTTTTCTTATTGAACTTATTCATCATAGCGG CACACAACTGCCTTTGATGACCGCGATTAGCCCTGCACGCAGTTTGGTCA TCATTGTCTTGATGACGCTGTTTTTGTGGCGATTTATCAATCAAGTGAAA TTGGGCTATTTGCATTTGTTACATTTAGATAAAACAAAAGCCGATAAAAC AACCATTTATTCGCTAGGTAAAGTAGCAAAAACGCTGGTCTTATTTATTG CTATTTTAATGGCATTACAAACGTTTCATATCAGTATAACGGGACTGTTA GCATTCGGTGGTATTGGTACCGCAGCGATTGCGTTTTCAGCCAAAGACTT GTTGGCGAATTTTTTCGGCGGCGTGATGATTTTTATGGATAAGCCGTTTT CGATTGGTGATTGGATTCGATCGCCTGACCGCCATATCGAAGGCATGGTT GAAGAGATTGGCTGGCGTATTACTAAAATCCGAACATTTGATAAGCGGCC GCTGCACGTGCCTAATTCGGTATTCAATAACATTCTCTTAGAAAATCCAT CAAGGATGTCTAACCGGCGCATCAAAACGCACATTGGAATTCGATATCAA GATGCGAGTAAAATCGAAGCAATTTTAATCAGTATAGAAGAAATGCTCAA AGTGCATCCGGATATTGATGTAAATCAGATTCTAATGGTAAAGCTTGTTG AGTTTGCCCCTTCGTCGTTAACGTTTATGGTATACACCTTCACGAAGACC ACGCGTTGGGTAGAATTTCAAGGCGTGCAACAAGATGTGTTTTTGAAAAT TATCGGTATCATCAAAAGAAAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88098:3..824+

>mRNA_M-pyrifera_M_contig88098.20464.1 ID=mRNA_M-pyrifera_M_contig88098.20464.1|Name=mRNA_M-pyrifera_M_contig88098.20464.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig88098:3..824+ (Macrocystis pyrifera P11B4 male)
ATTCTCGCATTGGGTGGATTTTTTCTTATTGAACTTATTCATCATAGCGG
CACACAACTGCCTTTGATGACCGCGATTAGCCCTGCACGCAGTTTGGTCA
TCATTGTCTTGATGACGCTGTTTTTGTGGCGATTTATCAATCAAGTGAAA
TTGGGCTATTTGCATTTGTTACATTTAGATAAAACAAAAGCCGATAAAAC
AACCATTTATTCGCTAGGTAAAGTAGCAAAAACGCTGGTCTTATTTATTG
CTATTTTAATGGCATTACAAACGTTTCATATCAGTATAACGGGACTGTTA
GCATTCGGTGGTATTGGTACCGCAGCGATTGCGTTTTCAGCCAAAGACTT
GTTGGCGAATTTTTTCGGCGGCGTGATGATTTTTATGGATAAGCCGTTTT
CGATTGGTGATTGGATTCGATCGCCTGACCGCCATATCGAAGGCATGGTT
GAAGAGATTGGCTGGCGTATTACTAAAATCCGAACATTTGATAAGCGGCC
GCTGCACGTGCCTAATTCGGTATTCAATAACATTCTCTTAGAAAATCCAT
CAAGGATGTCTAACCGGCGCATCAAAACGCACATTGGAATTCGATATCAA
GATGCGAGTAAAATCGAAGCAATTTTAATCAGTATAGAAGAAATGCTCAA
AGTGCATCCGGATATTGATGTAAATCAGATTCTAATGGTAAAGCTTGTTG
AGTTTGCCCCTTCGTCGTTAACGTTTATGGTATACACCTTCACGAAGACC
ACGCGTTGGGTAGAATTTCAAGGCGTGCAACAAGATGTGTTTTTGAAAAT
TATCGGTATCATCAAAAGAAATATTCTCGCATTGGGTGGATTTTTTCTTA
TTGAACTTATTCATCATAGCGGCACACAACTGCCTTTGATGACCGCGATT
AGCCCTGCACGCAGTTTGGTCATCATTGTCTTGATGACGCTGTTTTTGTG
GCGATTTATCAATCAAGTGAAATTGGGCTATTTGCATTTGTTACATTTAG
ATAAAACAAAAGCCGATAAAACAACCATTTATTCGCTAGGTAAAGTAGCA
AAAACGCTGGTCTTATTTATTGCTATTTTAATGGCATTACAAACGTTTCA
TATCAGTATAACGGGACTGTTAGCATTCGGTGGTATTGGTACCGCAGCGA
TTGCGTTTTCAGCCAAAGACTTGTTGGCGAATTTTTTCGGCGGCGTGATG
ATTTTTATGGATAAGCCGTTTTCGATTGGTGATTGGATTCGATCGCCTGA
CCGCCATATCGAAGGCATGGTTGAAGAGATTGGCTGGCGTATTACTAAAA
TCCGAACATTTGATAAGCGGCCGCTGCACGTGCCTAATTCGGTATTCAAT
AACATTCTCTTAGAAAATCCATCAAGGATGTCTAACCGGCGCATCAAAAC
GCACATTGGAATTCGATATCAAGATGCGAGTAAAATCGAAGCAATTTTAA
TCAGTATAGAAGAAATGCTCAAAGTGCATCCGGATATTGATGTAAATCAG
ATTCTAATGGTAAAGCTTGTTGAGTTTGCCCCTTCGTCGTTAACGTTTAT
GGTATACACCTTCACGAAGACCACGCGTTGGGTAGAATTTCAAGGCGTGC
AACAAGATGTGTTTTTGAAAATTATCGGTATCATCAAAAGAAAT
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