mRNA_M-pyrifera_M_contig88046.20458.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88046.20458.1
Unique NamemRNA_M-pyrifera_M_contig88046.20458.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A6L2Q6H0_COPFO (Na_Ca_ex domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q6H0_COPFO)

HSP 1 Score: 186 bits (473), Expect = 6.060e-57
Identity = 96/169 (56.80%), Postives = 126/169 (74.56%), Query Frame = 1 
Query:   16 ETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +  W   +R RI +++V PI F L  T+PD   P     F +TFI SIVWIA +SY MVWWA V+GDT+GIPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y I +GKP+EV + G+  S+ +LF+MLV V +SI    WK++
Sbjct:   15 DISWPDTARKRITYLLVAPIIFPLWMTLPDTRTPRGKKFFPITFIGSIVWIAAYSYLMVWWADVSGDTIGIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLYGIIYGKPVEVNSVGMVCSIAILFMMLVFVIISIACFHWKMN 183
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: E0VH72_PEDHC (Na_Ca_ex domain-containing protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VH72_PEDHC)

HSP 1 Score: 184 bits (467), Expect = 5.920e-56
Identity = 97/174 (55.75%), Postives = 127/174 (72.99%), Query Frame = 1 
Query:    1 PYKADETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            P  A +  W   +R R+ +++V PI F L  T+PD   P     F VTF+ SI+WIA FSYFMVWWA V GDTV IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y+I +GK +EV + G+  S+ +LF+MLV V +SI    WK++
Sbjct:   16 PLDALDMSWPDTARKRLTYILVAPIIFPLWLTLPDTRTPRGKKFFAVTFLGSILWIAAFSYFMVWWANVAGDTVRIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLYAIIYGKHVEVNSVGMVCSISILFMMLVFVILSIACFRWKMN 189
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A6P7GP52_DIAVI (sodium/potassium/calcium exchanger Nckx30C-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GP52_DIAVI)

HSP 1 Score: 182 bits (463), Expect = 3.440e-55
Identity = 96/174 (55.17%), Postives = 127/174 (72.99%), Query Frame = 1 
Query:    1 PYKADETDW-SILSRRIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            P +A +  W S   +RI +V++ PI F L  T+PD   P     F VTFI SIVWIA +SY MVWWA + GDTV IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL + I +GKP+EV + G+  S+ +LF+ML+ V +SI    WK++
Sbjct:   28 PPEAMDVSWPSGFRKRITYVLLAPIVFPLWLTLPDTRSPRGKKYFPVTFIGSIVWIAAYSYLMVWWANMVGDTVQIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLFGIIYGKPVEVNSVGMVCSITILFMMLIFVIMSIACFRWKMN 201
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A8K0JV51_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0JV51_LADFU)

HSP 1 Score: 181 bits (459), Expect = 1.160e-54
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 1 
Query:    7 KADETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +A +  W   +R R+ +V+V PI F L  T+PD   P     F VTFI SIVWIA +SY MVWWA V G++V IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y I +G+P+EV + G+  S+++LF+ML+ V +SI    WK++
Sbjct:   24 EALDMSWPDSTRKRVTYVLVAPIVFPLWLTLPDTRTPRGKKFFPVTFIGSIVWIAAYSYLMVWWADVAGESVSIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLYGIIYGQPVEVNSVGMVCSIVILFMMLIFVILSIACFRWKMN 195
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A1B6KYQ4_9HEMI (Na_Ca_ex domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KYQ4_9HEMI)

HSP 1 Score: 180 bits (457), Expect = 4.910e-54
Identity = 94/169 (55.62%), Postives = 121/169 (71.60%), Query Frame = 1 
Query:   16 ETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +  W    R R+ +++V PI F L  T+PD   P     F VTFI SI WIA FSY MVWWA V GDT+ IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y I +GKP+EV + G+  S+ +LF ML+ V +SI    WK++
Sbjct:   52 DMSWPDTGRKRLTYMLVAPILFPLWLTLPDTRTPKGKKWFPVTFIGSIAWIAAFSYLMVWWANVAGDTIRIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLYGIIYGKPVEVNSVGMVCSIAILFFMLLFVIMSIACFNWKMN 220
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A6A4KDN8_APOLU (Na_Ca_ex domain-containing protein n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4KDN8_APOLU)

HSP 1 Score: 182 bits (463), Expect = 8.550e-54
Identity = 94/169 (55.62%), Postives = 125/169 (73.96%), Query Frame = 1 
Query:   16 ETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +  W   +R RI +++V PI F L  T+PD   PT    F++TF  SIVWIA +SY MVWWA VTGDT+GIPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL + I  GKP+EV + G+  S+ +LF ML+ V +SI    W+++
Sbjct:  147 DMGWPDTARKRITYLLVAPIVFPLWLTLPDARTPTGKKWFIITFFGSIVWIAAYSYLMVWWANVTGDTIGIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLFGIIKGKPVEVNSVGMVCSIAILFFMLMFVILSIACFHWRMN 315
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: UPI001F5FD192 (sodium/potassium/calcium exchanger Nckx30C n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5FD192)

HSP 1 Score: 184 bits (466), Expect = 1.310e-53
Identity = 95/172 (55.23%), Postives = 127/172 (73.84%), Query Frame = 1 
Query:    7 KADETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +A +  W   +R R+ +++V PI F L  T+PD   P     FVVTF+ SIVWIA FSY MVWWA V GDT+ IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL + I +G+P+EV + G+  S+ +LF+MLV V +SI    WK++
Sbjct:  203 EALDMSWPNTARKRVTYLLVAPIVFPLWITLPDARTPRGKKFFVVTFLGSIVWIAAFSYLMVWWANVAGDTIRIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLFGIIYGRPVEVNSVGMVCSITILFMMLVFVIISIACFRWKMN 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: UPI000C7928E2 (sodium/potassium/calcium exchanger Nckx30C-like isoform X1 n=11 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7928E2)

HSP 1 Score: 189 bits (481), Expect = 1.490e-53
Identity = 96/162 (59.26%), Postives = 126/162 (77.78%), Query Frame = 1 
Query:   34 LSRRIYFVVVFPIRFCLLFTMPDP---TPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            LS+ I + ++ PI F L  ++PD    +    FVVTF+ SI+WIA FSY MVWWATV GDT+GIPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y+I F KP+ V ++GL  S+++LF ML+ V V I+ SGWK+S
Sbjct:  509 LSKTITYFILLPIVFPLWLSLPDTRKRSSRNFFVVTFVGSILWIAAFSYLMVWWATVAGDTIGIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYTIVFMKPITVSSEGLGCSIVLLFTMLIAVFVCILVSGWKMS 670
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A2J7QS21_9NEOP (Na_Ca_ex domain-containing protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QS21_9NEOP)

HSP 1 Score: 181 bits (460), Expect = 1.500e-53
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 1 
Query:    7 KADETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            +A +  W   +R RI +++V PI F L  T+PD   P     F +TF+ SIVWIA +SY MVWWA V+GDT+ IPP VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLP+PWL Y I +GKP+EV + G+  S+ +LF+ML+ V +SI    WK++
Sbjct:  126 EALDMSWPDTARKRITYLLVAPIIFPLWITLPDTRTPRGKKFFPITFLGSIVWIAAYSYLMVWWANVSGDTIRIPPEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPVPWLLYGIIYGKPVEVNSIGMVCSIAILFMMLLFVILSIACFHWKMN 297
[Close]
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Match: A0A182NTW1_9DIPT (Na_Ca_ex domain-containing protein n=4 Tax=Cellia TaxID=44534 RepID=A0A182NTW1_9DIPT)

HSP 1 Score: 177 bits (450), Expect = 2.030e-53
Identity = 96/174 (55.17%), Postives = 125/174 (71.84%), Query Frame = 1 
Query:    1 PYKADETDWSILSR-RIYFVVVFPIRFCLLFTMPD---PTPSPLFVVTFIMSIVWIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRKGFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIVLFIMLVLVAVSIIASGWKLS 510
            P +A    W   +R RI +++V PI F L  T+PD   P     F VTFI SIVWIA +SY MVWWATV GDT  IP  VMG+TFLAAGTS+PDL+TSV+V RKGFG+MA+SSS+GSN+FD + GLPIPWL Y I +G+P+EV + G+  S+ +LF+ML+ V +SI    W+++
Sbjct:   13 PPEALSMSWPKGARKRITYLLVAPIIFPLYLTLPDTRTPRGKKFFPVTFIGSIVWIAAYSYLMVWWATVVGDTSKIPAEVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLMYGIIYGQPVEVNSVGMVCSITILFLMLLFVVMSIACFRWRMN 186
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88046.20458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L2Q6H0_COPFO6.060e-5756.80Na_Ca_ex domain-containing protein n=1 Tax=Coptote... [more]
E0VH72_PEDHC5.920e-5655.75Na_Ca_ex domain-containing protein n=1 Tax=Pedicul... [more]
A0A6P7GP52_DIAVI3.440e-5555.17sodium/potassium/calcium exchanger Nckx30C-like n=... [more]
A0A8K0JV51_LADFU1.160e-5454.65Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1B6KYQ4_9HEMI4.910e-5455.62Na_Ca_ex domain-containing protein (Fragment) n=1 ... [more]
A0A6A4KDN8_APOLU8.550e-5455.62Na_Ca_ex domain-containing protein n=1 Tax=Apolygu... [more]
UPI001F5FD1921.310e-5355.23sodium/potassium/calcium exchanger Nckx30C n=1 Tax... [more]
UPI000C7928E21.490e-5359.26sodium/potassium/calcium exchanger Nckx30C-like is... [more]
A0A2J7QS21_9NEOP1.500e-5354.65Na_Ca_ex domain-containing protein n=1 Tax=Cryptot... [more]
A0A182NTW1_9DIPT2.030e-5355.17Na_Ca_ex domain-containing protein n=4 Tax=Cellia ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88046contigM-pyrifera_M_contig88046:6..641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score183.7
Seed ortholog evalue7.1e-44
Seed eggNOG ortholog121225.PHUM202410-PA
KEGG koko:K13750
KEGG TC2.A.19.4.2
Hectar predicted targeting categorysignal anchor
GOsGO:0001654,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007275,GO:0007423,GO:0008150,GO:0008273,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015081,GO:0015085,GO:0015267,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0019725,GO:0022803,GO:0022804,GO:0022821,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030955,GO:0031224,GO:0031226,GO:0031402,GO:0031420,GO:0032501,GO:0032502,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0048513,GO:0048731,GO:0048749,GO:0048856,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071804,GO:0071805,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516
EggNOG free text desc.Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
EggNOG OGs38CGX@33154,3B994@33208,3CRWG@33213,3SHG3@50557,41XKG@6656,COG0530@1,KOG1307@2759
COG Functional cat.PT
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons2
Model size510
Cds size510
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.221605-CDS-M-pyrifera_M_contig88046:5..4101622816790.221605-CDS-M-pyrifera_M_contig88046:5..410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88046 6..410 -
1692278179.9073188-CDS-M-pyrifera_M_contig88046:5..4101692278179.9073188-CDS-M-pyrifera_M_contig88046:5..410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88046 6..410 -
1622816790.2370315-CDS-M-pyrifera_M_contig88046:536..6411622816790.2370315-CDS-M-pyrifera_M_contig88046:536..641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88046 537..641 -
1692278179.9302084-CDS-M-pyrifera_M_contig88046:536..6411692278179.9302084-CDS-M-pyrifera_M_contig88046:536..641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88046 537..641 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88046.20458.1prot_M-pyrifera_M_contig88046.20458.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88046 6..641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88046.20458.1

>prot_M-pyrifera_M_contig88046.20458.1 ID=prot_M-pyrifera_M_contig88046.20458.1|Name=mRNA_M-pyrifera_M_contig88046.20458.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
PYKADETDWSILSRRIYFVVVFPIRFCLLFTMPDPTPSPLFVVTFIMSIV
WIAIFSYFMVWWATVTGDTVGIPPAVMGITFLAAGTSVPDLLTSVLVTRK
GFGNMAISSSIGSNLFDSSFGLPIPWLFYSIAFGKPMEVIADGLFSSVIV
LFIMLVLVAVSIIASGWKLS
back to top

mRNA from alignment at M-pyrifera_M_contig88046:6..641-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88046.20458.1 ID=mRNA_M-pyrifera_M_contig88046.20458.1|Name=mRNA_M-pyrifera_M_contig88046.20458.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig88046:6..641- (Macrocystis pyrifera P11B4 male)
CCTTACAAGGCGGATGAGACAGATTGGAGCATTTTGAGCCGAAGAATCTA
CTTTGTGGTCGTATTTCCCATTCGATTCTGTCTTCTCTTCACCATGCCAG
ACCCTGTGCCAAAAGCAAAGTCATTCTTGGGACTCTGTGAAATCAGACCG
TTCCGAGCGAGAGCTGGAAGACCACGAGCAGAACTCAAGGCACACCCTGA
CGATCCAGACGATGAAGTCAACCCAAGCAAGACTCCATCGCCACTCTTTG
TCGTCACCTTCATCATGAGCATCGTGTGGATTGCCATTTTCTCCTACTTT
ATGGTCTGGTGGGCCACAGTCACAGGTGATACAGTGGGAATCCCACCGGC
AGTCATGGGAATCACTTTCCTTGCCGCTGGAACCTCAGTTCCAGATCTCC
TCACATCAGTGCTTGTGACACGAAAGGGCTTTGGAAACATGGCAATTTCT
TCTTCCATCGGATCCAACCTCTTTGACTCCAGTTTTGGACTCCCAATCCC
ATGGCTCTTCTACTCCATCGCATTCGGAAAACCCATGGAAGTCATCGCTG
ATGGACTCTTCAGCTCAGTCATCGTGCTCTTCATCATGCTTGTCCTTGTT
GCAGTTTCGATCATTGCTTCAGGATGGAAACTTAGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig88046:6..641-

>mRNA_M-pyrifera_M_contig88046.20458.1 ID=mRNA_M-pyrifera_M_contig88046.20458.1|Name=mRNA_M-pyrifera_M_contig88046.20458.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig88046:6..641- (Macrocystis pyrifera P11B4 male)
CCTTACAAGGCGGATGAGACAGATTGGAGCATTTTGAGCCGAAGAATCTA
CTTTGTGGTCGTATTTCCCATTCGATTCTGTCTTCTCTTCACCATGCCAG
ACCCTCCTTACAAGGCGGATGAGACAGATTGGAGCATTTTGAGCCGAAGA
ATCTACTTTGTGGTCGTATTTCCCATTCGATTCTGTCTTCTCTTCACCAT
GCCAGACCCTACTCCATCGCCACTCTTTGTCGTCACCTTCATCATGAGCA
TCGTGTGGATTGCCATTTTCTCCTACTTTATGGTCTGGTGGGCCACAGTC
ACAGGTGATACAGTGGGAATCCCACCGGCAGTCATGGGAATCACTTTCCT
TGCCGCTGGAACCTCAGTTCCAGATCTCCTCACATCAGTGCTTGTGACAC
GAAAGGGCTTTGGAAACATGGCAATTTCTTCTTCCATCGGATCCAACCTC
TTTGACTCCAGTTTTGGACTCCCAATCCCATGGCTCTTCTACTCCATCGC
ATTCGGAAAACCCATGGAAGTCATCGCTGATGGACTCTTCAGCTCAGTCA
TCGTGCTCTTCATCATGCTTGTCCTTGTTGCAGTTTCGATCATTGCTTCA
GGATGGAAACTTAGCACTCCATCGCCACTCTTTGTCGTCACCTTCATCAT
GAGCATCGTGTGGATTGCCATTTTCTCCTACTTTATGGTCTGGTGGGCCA
CAGTCACAGGTGATACAGTGGGAATCCCACCGGCAGTCATGGGAATCACT
TTCCTTGCCGCTGGAACCTCAGTTCCAGATCTCCTCACATCAGTGCTTGT
GACACGAAAGGGCTTTGGAAACATGGCAATTTCTTCTTCCATCGGATCCA
ACCTCTTTGACTCCAGTTTTGGACTCCCAATCCCATGGCTCTTCTACTCC
ATCGCATTCGGAAAACCCATGGAAGTCATCGCTGATGGACTCTTCAGCTC
AGTCATCGTGCTCTTCATCATGCTTGTCCTTGTTGCAGTTTCGATCATTG
CTTCAGGATGGAAACTTAGC
back to top