mRNA_M-pyrifera_M_contig88029.20450.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88029.20450.1
Unique NamemRNA_M-pyrifera_M_contig88029.20450.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A098LK38_9BACT (Uncharacterized protein n=1 Tax=Sporocytophaga myxococcoides TaxID=153721 RepID=A0A098LK38_9BACT)

HSP 1 Score: 192 bits (488), Expect = 8.480e-54
Identity = 115/281 (40.93%), Postives = 165/281 (58.72%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPND--DFFGLLGFENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFV-KAPFSVGVNYSNYSSEFRYVLN----SSLDSLNAVAVTQ 822
            +S Y+LAGHTFLGGG++L PG  RF+  YGR + AV  D       +PS+ R G G KIG G  +++IDLI+F ++D   S  V P  + + P ENMV     +  L K + ++ E+A SAYT D R  +   +  + F    F  + STQ   A+K S +Y  + ++    YERI+P Y+T+G+YFFNND+ENIT A S  LF+ K+ +S N G+QRNNL   EIS  KR +GSG + FV    ++    YSN+ +  +   N     +LD+LN   V++
Sbjct:  127 FSQYSLAGHTFLGGGVDLTPGIFRFSAMYGRLSKAVKEDTLNVAGEIPSYKRMGMGFKIGVGKGSDFIDLIWFSSKDDVRSIEV-PVKSDIRPAENMVFSINMQKELAKRIVVAAEYARSAYTRDLRAPIETGEQTNMFSPF-FPVRNSTQFYGAFKSSLTYSANLYSLGLIYERIDPQYKTLGSYFFNNDLENITVAPSVRLFKQKMNVSANVGMQRNNLNKQEISTVKRLLGSGAISFVPNQKWNFAAQYSNFKTYNKISQNFNQFQTLDTLNFYQVSE 405          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A553FVD0_9BACT (Uncharacterized protein n=1 Tax=Fulvivirga sp. M361 TaxID=2594266 RepID=A0A553FVD0_9BACT)

HSP 1 Score: 192 bits (488), Expect = 9.240e-54
Identity = 115/290 (39.66%), Postives = 164/290 (56.55%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPG-KIRFAVNYGRFASAVPMDQSITEPF--VPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDFFGL--LGFENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGS-------GNLIFVKAPFSVGVNYSNYSSEFRYVLN----SSLDSLNAVAVTQ 822
            YS YTL GH FLG GLE  P  K  F   YGR   AVP+D +++E     P+F R GYG    YGD++N++ LI F A D  +S   +P+   V P EN+VL      ++ K LS+ GEFATSA T D R E     + F    L F ++ S+   NA+    +Y+L K+ F   YER++P Y+T GAYFFNND+ENITA  +  LF+  + ++++ G Q+NNL + EI++T+R IGS        N + + A +S    +    S+F  V       +LD+LN   ++Q
Sbjct:  120 YSQYTLNGHIFLGMGLEAKPAEKWSFGGMYGRLLKAVPLD-TLSEGLGETPTFQRMGYGFNARYGDNSNHVQLILFHAEDDINSLPFVPEQVNVLPEENLVLSVRAVKTIAKRLSLQGEFATSAITRDTRAETFEPGNIFNFTDLLFTSRTSSSYYNAFNFGANYRLDKYAFGMKYERVDPGYRTHGAYFFNNDLENITANVAARLFKDAVNVAISAGTQQNNLENNEINDTRRWIGSVNCNANLSNNLSINASYSTFRTFMVVRSDFEQVNQLTPFDNLDTLNFTQISQ 408          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: UPI00197AFE4F (hypothetical protein n=1 Tax=Fulvivirga lutea TaxID=2810512 RepID=UPI00197AFE4F)

HSP 1 Score: 190 bits (482), Expect = 5.310e-53
Identity = 114/288 (39.58%), Postives = 165/288 (57.29%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNP-GKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIP--NDDFFGLLGFENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-FSVGVNYSNYS------SEFRYVLN----SSLDSLNAVAVTQ 822
            +S YTL GH FLG G++L P  K+  +  YGR   AV  D S  E  +P+F R G+G K  YG  ++ +  IFF A D ++S   +P++  V P EN+VL  A   ++V NL + GEFATSA T D R       N + F    F  K ST   NAY +  SY  S  +    YERI+P Y+T+GAYFFNN++ENITA  +T LF  K+ + +N GLQR+NL   ++S   R +GS N+ +  +   ++ VNYS+++      S+F+ +       +LD+LN   ++Q
Sbjct:  103 FSPYTLNGHLFLGAGVDLQPTDKLSISAMYGRLQKAVQPD-STNESVLPAFHRTGFGLKTSYGSASDNVTFIFFSATDDENSLNYVPESLEVLPRENLVLSLAGSKTIVPNLVLKGEFATSALTRDKRAASYEPSNKNIFSTGIFNQKQSTGYYNAYNLGVSYAFSTFSIGAGYERIDPGYETLGAYFFNNNLENITANANTALFSGKVNVGVNAGLQRDNLDGEKVSSMSRFVGSMNVGYTPSNRLNIAVNYSSFNTYTNIRSQFQDINQLTPYDNLDTLNFTQISQ 389          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: L8JVU4_9BACT (Uncharacterized protein n=3 Tax=Fulvivirga TaxID=396811 RepID=L8JVU4_9BACT)

HSP 1 Score: 190 bits (483), Expect = 7.680e-53
Identity = 108/282 (38.30%), Postives = 159/282 (56.38%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDFFGLLG-FENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-FSVGVNYSNYSS------EFRYVLNSSLDSLNAVAVTQ 822
            +S YTLAGH FLG G+EL PGK +F+  YG    AVP D       +P+F R GYG K GY D  + +++I FKA D   S   +P    V P EN+V+    +  L K +S++ E+ATSA T D R E + +         F ++AS+Q  NA+  S +Y  + +     YERI+P + T+GAYFFN+D+EN+T + S    ++KL L  N G Q+NNL +TE+S T+R I S N  ++    +++   YSN+++       F     + LD+LN   V +
Sbjct:  113 FSKYTLAGHVFLGAGVELTPGKWQFSAMYGELNKAVPEDTLAVTSNLPAFKRMGYGMKAGYHDQAHSLEVIIFKAEDEVGSIPYVPVQNEVLPKENLVVSFLGRKQLFKRVSLNMEYATSALTHDIRSEEVESGHTLAQTPLFTSRASSQFNNAFNTSIAYNGNTYVLQLNYERIDPGFNTLGAYFFNDDLENLTVSGSVRALKNKLTLGANVGKQKNNLEETEVSSTERVIASFNANYIPDQHWNINATYSNFTTFTNVRPRFDPFFQNDLDTLNFYQVNK 394          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A662BMT8_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A662BMT8_9BACT)

HSP 1 Score: 189 bits (480), Expect = 1.670e-52
Identity = 119/292 (40.75%), Postives = 172/292 (58.90%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKI-RFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDAR----DELIP--NDDFFGLLGFENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFV-KAPFSVGVNYSNYSS------EFRYVLNSS----LDSLNAVAVTQ 822
            +S YTL G+TF GGG EL PGKI  F+  YGR   A+  D S  +     + R GYG KIG   D ++IDLIFFKA D  +S   +PD   + PGEN+VLG     +  K + +  E+A+SA T D R    DE +P    +  GL  F  + S+   NA K S +Y  S +     YERI+P Y+TMGAY+FNND+EN+T   +T +F++K+ L++N GL+ NNL D ++S  K+T+G+ N+ F   A +++  +YSN++S      +F Y+   +    LD+LN   +TQ
Sbjct:  120 FSPYTLNGYTFSGGGAELTPGKIFNFSAMYGRLHEAIEEDTS--QNITAVYKRMGYGFKIGAKKDADFIDLIFFKAEDDVNSLLYVPDNLEIKPGENLVLGVRGGKTFAKKVKLDFEYASSAITRDIRTEKYDENVPVLYRNISGL--FTPRVSSSFYNALKGSFNYLGSGYGLGIAYERIDPGYETMGAYYFNNDLENLTINANTAIFKNKIQLAVNFGLEHNNLDDDKLSTMKKTVGAFNVNFSPSAKWNITTSYSNFTSFTNIRSDFDYINQVNPIIPLDTLNFTQITQ 407          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A662BWS9_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A662BWS9_9BACT)

HSP 1 Score: 186 bits (472), Expect = 1.590e-51
Identity = 117/292 (40.07%), Postives = 174/292 (59.59%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKI-RFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDAR----DELIP--NDDFFGLLGFENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-FSVGVNYSNYSS------EFRYVLNSS----LDSLNAVAVTQ 822
            +S YTL G+TFLGGG EL PGKI  F+  YGR   A+  D S  +   P + R GYG KIG   D ++IDLIFFKA+D  +S   + +   + PGEN+VLG     +  K    + E+A+SA T D R    DE +P    +  GL  F  + S+   +A K + +Y  + +     YERI+P Y+TMGAY+FNND+EN T   +T +F++K+ L++N GL+RNNL D ++S  K+T+G+ N+ F  +P +++  +YSN++S      +F Y+   +    LD+LN   +TQ
Sbjct:   96 FSPYTLNGYTFLGGGAELTPGKIFNFSAMYGRLHEAIEEDTS--QNIAPVYKRTGYGFKIGAKKDADFIDLIFFKAQDEANSLYFVSEDWEIKPGENLVLGVQGGKTFAKAFKFNFEYASSAITRDIRAEKQDENVPVLYGNIPGL--FTPRVSSSFYDALKGAFNYSGTGYGLGVAYERIDPGYETMGAYYFNNDLENYTINANTAIFKNKVQLAVNLGLERNNLDDDKLSTMKKTVGAFNINFSPSPKWNIATSYSNFTSFTNIRSDFDYINQVNPILPLDTLNFTQLTQ 383          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A3M1YP35_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1YP35_9BACT)

HSP 1 Score: 186 bits (472), Expect = 1.620e-51
Identity = 107/264 (40.53%), Postives = 157/264 (59.47%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFV-PSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAV--IPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDFFGLLG-------FENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-FSVGVNYSNYS 759
            +S YTLAGHTFLGGG+EL PGK+RFA  YGR  +A  +D   T  FV P+F R G G K+GYG +  ++D I FK +D  +S +   +P  T   P EN+V+G   + +L KNL ++  +A SA+T D     +  D   G +G        + KAST+   A   + ++  +    +  YERI+P+Y+TMGA+FF ND+E  T + +  ++++K+ +S   G+QRNNL    +  T R IG+ NL F  +P + V VN+SNYS
Sbjct:  116 FSPYTLAGHTFLGGGIELKPGKLRFAAMYGRLRNAAEVDT--TRSFVEPAFKRIGLGMKLGYGSEQTHLDFILFKGKDDPNSLSQSNLPGLT---PAENLVVGVNARITLFKNLQLNSNWAASAFTRDLNSLPVIADSLNGSIGKYIPDEILQTKASTRANLAGNTTLTWSKNSFRLNLEYERIDPEYETMGAWFFANDLERYTVSPALGVWKNKIRVSGTYGIQRNNLLGNRLETTTRNIGAANLDFNPSPKWGVNVNFSNYS 374          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: A0A553AK78_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium sp. GT3R68 TaxID=2594437 RepID=A0A553AK78_9FLAO)

HSP 1 Score: 186 bits (471), Expect = 2.120e-51
Identity = 102/260 (39.23%), Postives = 150/260 (57.69%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDFFGLLGFEN----KASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIF-VKAPFSVGVNYSNYSSE 765
            +S +T +G T LG  +ELNPGK+RF + YGR   AV  D +  E   PSF R GY  ++GYG + +++DLI  K +D ++S   IP  T V PGEN+V G + K+ L + L    + ATS +T D R   +  DD   +  F +     +STQ+ NAY+    Y+  K+     Y R++PD+Q+MGAY+F  D+ENIT   S  L ++KL ++ + G QR+NL + +   TKR IG+  L + + + F     Y NYS E
Sbjct:  115 WSPFTWSGQTALGAAVELNPGKLRFGLLYGRLNRAVEEDLTSPEVQTPSFKRMGYAFRMGYGTETSHVDLIMLKGKDDENSLNTIPQGTEVLPGENVVAGISSKYKLTQKLFWDADVATSVFTRDVRALPLSGDDASTVNSFNSLIIVNSSTQMYNAYQTEVRYEEKKYKIKAKYRRVDPDFQSMGAYYFQTDVENITLEPSAYLLKNKLKITSSLGRQRDNLMNKKSFTTKRFIGNIGLDYTLSSIFGFNAMYGNYSGE 374          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: L8JZU8_9BACT (Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8JZU8_9BACT)

HSP 1 Score: 183 bits (464), Expect = 3.190e-50
Identity = 97/259 (37.45%), Postives = 152/259 (58.69%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDAR--DELIPNDDFFGLLG--FENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-FSVGVNYSNYSS 762
            +S YTLAGH FLG G+E  PGK   +  YGR   AV  D +     VP+F R GYG K GY D N+++++I F+A+D ++S + +PD   + P EN+VL  A    L   + +  E+A S  T D R  +  + ++  F   G  F  + S+   +A+K   +Y+   ++    YERI+P Y+T+GAYFFNND+E+IT   +T  F  K+ ++ N G+QR+NL +T++S  KR +GS N+ +  +   +   +YSN+ +
Sbjct:  123 FSPYTLAGHIFLGAGIEARPGKWNVSAMYGRLQKAVEPDSTSEGTVVPAFKRMGYGVKAGYADGNDFVNIIAFRAKDEENSISYVPDGDDILPEENLVLSVAGGKELFSRIVLMAEYAISGITRDTRAPEASLESNKIFDNAGPLFTPRLSSSYYSAFKTGVNYQADAYSIGFGYERIDPGYRTLGAYFFNNDMESITMNTATAFFGGKVNVAANVGVQRDNLDNTKVSTMKRVVGSMNIGYAASERLNFSASYSNFQT 381          
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Match: UPI001626F989 (hypothetical protein n=1 Tax=Fulvivirga kasyanovii TaxID=396812 RepID=UPI001626F989)

HSP 1 Score: 183 bits (464), Expect = 3.240e-50
Identity = 106/289 (36.68%), Postives = 158/289 (54.67%), Query Frame = 1
Query:    1 YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSFDRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLGTAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDF--FGLLG--FENKASTQVRNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTTLFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAP-------FSVGVNYSNYSSEF----RYVLNSSLDSLNAVAVTQ 822
            +S YTLAGH FLG G+E  PGK   +  YGR   AV  D        P+F R GYG K GY D N+++  I F +RD   S   IPD   ++P EN+V   A    L   + +S E+A S  T D R E +  + +  F   G  F  + S+   NA+K   +Y+    +    YERI+P Y+T GAY+FNND+EN+TA  +T LF  K+ +++N G+QR+NL D++IS  +R +G+ N+ +  +        +S    Y+N  S+F    +     +LD+LN + ++Q
Sbjct:  124 FSPYTLAGHLFLGAGIEARPGKWHISTMYGRLQRAVEPDSLNESSVTPAFKRMGYGVKAGYADGNDFVHFIIFGSRDDASSINYIPDNEEIYPEENLVFSVAGGKELFSRIVLSTEYAISGITRDTRAETVKVEKYKVFNAAGGLFTPRLSSSYYNAFKTGLTYQADAFSVGLGYERIDPGYRTHGAYYFNNDLENLTANAATALFSGKVNIAVNVGVQRDNLDDSKISSMERIVGAVNVGYAASERLNFSGSYSSFQTYTNIRSQFVDINQLTPYDNLDTLNYIQISQ 412          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88029.20450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A098LK38_9BACT8.480e-5440.93Uncharacterized protein n=1 Tax=Sporocytophaga myx... [more]
A0A553FVD0_9BACT9.240e-5439.66Uncharacterized protein n=1 Tax=Fulvivirga sp. M36... [more]
UPI00197AFE4F5.310e-5339.58hypothetical protein n=1 Tax=Fulvivirga lutea TaxI... [more]
L8JVU4_9BACT7.680e-5338.30Uncharacterized protein n=3 Tax=Fulvivirga TaxID=3... [more]
A0A662BMT8_9BACT1.670e-5240.75Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
A0A662BWS9_9BACT1.590e-5140.07Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
A0A3M1YP35_9BACT1.620e-5140.53Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
A0A553AK78_9FLAO2.120e-5139.23Uncharacterized protein n=1 Tax=Flavobacterium sp.... [more]
L8JZU8_9BACT3.190e-5037.45Uncharacterized protein n=1 Tax=Fulvivirga imteche... [more]
UPI001626F9893.240e-5036.68hypothetical protein n=1 Tax=Fulvivirga kasyanovii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88029contigM-pyrifera_M_contig88029:3..824 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score197.2
Seed ortholog evalue9.9e-48
Seed eggNOG ortholog153721.MYP_4054
Hectar predicted targeting categoryother localisation
EggNOG free text desc.usher protein
EggNOG OGs47K9Y@768503,4NHCJ@976,COG3188@1,COG3188@2
COG Functional cat.NU
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons1
Model size822
Cds size822
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816789.902432-CDS-M-pyrifera_M_contig88029:2..8241622816789.902432-CDS-M-pyrifera_M_contig88029:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88029 3..824 -
1692278179.7833042-CDS-M-pyrifera_M_contig88029:2..8241692278179.7833042-CDS-M-pyrifera_M_contig88029:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88029 3..824 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88029.20450.1prot_M-pyrifera_M_contig88029.20450.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88029 3..824 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88029.20450.1

>prot_M-pyrifera_M_contig88029.20450.1 ID=prot_M-pyrifera_M_contig88029.20450.1|Name=mRNA_M-pyrifera_M_contig88029.20450.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
YSSYTLAGHTFLGGGLELNPGKIRFAVNYGRFASAVPMDQSITEPFVPSF
DRFGYGGKIGYGDDNNYIDLIFFKARDHQDSWAVIPDTTAVFPGENMVLG
TAWKFSLVKNLSISGEFATSAYTVDARDELIPNDDFFGLLGFENKASTQV
RNAYKISTSYKLSKHTFSGTYERIEPDYQTMGAYFFNNDIENITAAYSTT
LFESKLILSLNGGLQRNNLFDTEISETKRTIGSGNLIFVKAPFSVGVNYS
NYSSEFRYVLNSSLDSLNAVAVTQ
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mRNA from alignment at M-pyrifera_M_contig88029:3..824-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88029.20450.1 ID=mRNA_M-pyrifera_M_contig88029.20450.1|Name=mRNA_M-pyrifera_M_contig88029.20450.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig88029:3..824- (Macrocystis pyrifera P11B4 male)
TATTCGAGCTATACGTTGGCTGGTCATACTTTTTTAGGAGGAGGACTGGA ACTGAATCCAGGCAAGATCCGATTTGCAGTCAATTACGGACGCTTTGCTT CTGCCGTTCCCATGGACCAATCAATTACAGAACCCTTTGTACCCAGCTTT GATCGCTTTGGCTATGGAGGAAAAATCGGATATGGCGATGATAATAATTA TATAGACTTGATATTTTTTAAGGCTAGAGATCATCAGGACTCTTGGGCGG TAATTCCTGACACTACCGCTGTATTTCCTGGAGAAAATATGGTGCTCGGA ACAGCATGGAAATTTTCTCTGGTTAAAAATTTATCAATTTCAGGAGAGTT TGCCACATCAGCCTATACGGTAGATGCCAGGGATGAACTCATACCAAACG ATGATTTTTTTGGTCTACTAGGATTCGAAAATAAAGCTTCGACTCAAGTT AGAAATGCTTACAAAATTTCTACTTCTTATAAACTCAGTAAACATACTTT CTCAGGAACCTATGAACGAATTGAACCAGACTACCAGACAATGGGAGCTT ATTTTTTCAATAATGACATAGAGAATATCACAGCAGCCTATTCCACTACT CTATTTGAAAGTAAACTCATACTATCCTTAAATGGTGGTTTGCAGCGAAA TAATTTATTCGACACAGAAATATCAGAAACAAAAAGGACAATTGGATCCG GGAATTTGATTTTTGTAAAGGCACCTTTTTCCGTAGGAGTCAATTATTCC AATTATTCATCCGAATTCCGATACGTATTAAATTCATCTTTGGACAGTCT CAATGCCGTAGCAGTAACTCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88029:3..824-

>mRNA_M-pyrifera_M_contig88029.20450.1 ID=mRNA_M-pyrifera_M_contig88029.20450.1|Name=mRNA_M-pyrifera_M_contig88029.20450.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig88029:3..824- (Macrocystis pyrifera P11B4 male)
TATTCGAGCTATACGTTGGCTGGTCATACTTTTTTAGGAGGAGGACTGGA
ACTGAATCCAGGCAAGATCCGATTTGCAGTCAATTACGGACGCTTTGCTT
CTGCCGTTCCCATGGACCAATCAATTACAGAACCCTTTGTACCCAGCTTT
GATCGCTTTGGCTATGGAGGAAAAATCGGATATGGCGATGATAATAATTA
TATAGACTTGATATTTTTTAAGGCTAGAGATCATCAGGACTCTTGGGCGG
TAATTCCTGACACTACCGCTGTATTTCCTGGAGAAAATATGGTGCTCGGA
ACAGCATGGAAATTTTCTCTGGTTAAAAATTTATCAATTTCAGGAGAGTT
TGCCACATCAGCCTATACGGTAGATGCCAGGGATGAACTCATACCAAACG
ATGATTTTTTTGGTCTACTAGGATTCGAAAATAAAGCTTCGACTCAAGTT
AGAAATGCTTACAAAATTTCTACTTCTTATAAACTCAGTAAACATACTTT
CTCAGGAACCTATGAACGAATTGAACCAGACTACCAGACAATGGGAGCTT
ATTTTTTCAATAATGACATAGAGAATATCACAGCAGCCTATTCCACTACT
CTATTTGAAAGTAAACTCATACTATCCTTAAATGGTGGTTTGCAGCGAAA
TAATTTATTCGACACAGAAATATCAGAAACAAAAAGGACAATTGGATCCG
GGAATTTGATTTTTGTAAAGGCACCTTTTTCCGTAGGAGTCAATTATTCC
AATTATTCATCCGAATTCCGATACGTATTAAATTCATCTTTGGACAGTCT
CAATGCCGTAGCAGTAACTCAGTATTCGAGCTATACGTTGGCTGGTCATA
CTTTTTTAGGAGGAGGACTGGAACTGAATCCAGGCAAGATCCGATTTGCA
GTCAATTACGGACGCTTTGCTTCTGCCGTTCCCATGGACCAATCAATTAC
AGAACCCTTTGTACCCAGCTTTGATCGCTTTGGCTATGGAGGAAAAATCG
GATATGGCGATGATAATAATTATATAGACTTGATATTTTTTAAGGCTAGA
GATCATCAGGACTCTTGGGCGGTAATTCCTGACACTACCGCTGTATTTCC
TGGAGAAAATATGGTGCTCGGAACAGCATGGAAATTTTCTCTGGTTAAAA
ATTTATCAATTTCAGGAGAGTTTGCCACATCAGCCTATACGGTAGATGCC
AGGGATGAACTCATACCAAACGATGATTTTTTTGGTCTACTAGGATTCGA
AAATAAAGCTTCGACTCAAGTTAGAAATGCTTACAAAATTTCTACTTCTT
ATAAACTCAGTAAACATACTTTCTCAGGAACCTATGAACGAATTGAACCA
GACTACCAGACAATGGGAGCTTATTTTTTCAATAATGACATAGAGAATAT
CACAGCAGCCTATTCCACTACTCTATTTGAAAGTAAACTCATACTATCCT
TAAATGGTGGTTTGCAGCGAAATAATTTATTCGACACAGAAATATCAGAA
ACAAAAAGGACAATTGGATCCGGGAATTTGATTTTTGTAAAGGCACCTTT
TTCCGTAGGAGTCAATTATTCCAATTATTCATCCGAATTCCGATACGTAT
TAAATTCATCTTTGGACAGTCTCAATGCCGTAGCAGTAACTCAG
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