mRNA_M-pyrifera_M_contig8779.20391.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: D8LGL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI) HSP 1 Score: 187 bits (475), Expect = 1.620e-58 Identity = 88/104 (84.62%), Postives = 92/104 (88.46%), Query Frame = 3 Query: 102 GPSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLPATAFDPRDLFKADVAAAAGE 413 GP PPFARNKPVDYQLDENHEL+WDDGVAPETTIDFDAPHMS SEA WWGGGL FFA +LGLV LSDPESKREAVPR+ TLPATAFDPRDLFKA+ AAGE Sbjct: 15 GPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAAGE 118
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A835ZFI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA) HSP 1 Score: 112 bits (281), Expect = 5.200e-29 Identity = 56/106 (52.83%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 111 MPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLPATAFDPRDLF---KADVAAAAGEED 419 MPP AR +L E EL+WDD VAPE +DFDAPH+S ++ L WW GGL FFA V +V LS PE +REA+PR+ T+P AFDP DLF + + AA EE+ Sbjct: 31 MPPMARQPRPTQRLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLSYPEGRREALPRTATMPPAAFDPVDLFTGKRGRLGVAAEEEE 136
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A7S1FZR7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZR7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.190e-23 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 105 PSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSV 344 P +PPFARN +L E+HEL+WDDGVAPE TIDFD PH S + L W GG+AFF T+ +V L+DP SK A PR + Sbjct: 46 PPLPPFARNLAPQEKLHESHELMWDDGVAPELTIDFDVPHYSGEKGLAMWLGGIAFFVTLYQVVKLTDPASKNPAAPREL 125
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A7S2P129_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 7.030e-21 Identity = 45/82 (54.88%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 105 PSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTL 350 P PPFARN +L E+HELVWDDGVAPE TIDFD+ H+ST E L WW GGL FF + D ESK AV R + Sbjct: 32 PPTPPFARNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGLFQFCKTIDMESKNPAVNRKADI 113
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A7R9ZHV7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHV7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 9.890e-21 Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 105 PSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTL 350 P +PPFAR +L EN++ VWDDGVAPET +DFD H+S+ E L WW GGL FF +V V +DPESK AV R + + Sbjct: 54 PPLPPFARIPAPTEKLVENNDAVWDDGVAPETALDFDCQHISSEEGLAWWLGGLGFFFSVYQFVKWTDPESKNPAVNRKMNM 135
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A6U3R2X0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R2X0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.030e-19 Identity = 42/80 (52.50%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 114 PPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLP 353 PPF R L E HELVWDDGVA ET IDFDAPH+S+SE WW GG FF V + L DP+++ PR T+P Sbjct: 45 PPFIRTLAPQGSLHEEHELVWDDGVAAETCIDFDAPHISSSEGFAWWIGGFLFFLGVGTVALLRDPDAQNPTTPRGPTMP 124
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: B8BWZ0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWZ0_THAPS) HSP 1 Score: 88.2 bits (217), Expect = 2.400e-19 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 105 PSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSV 344 P + PFAR P +L E ++ +WDDGVAPE T+DFD H+S+ E L W GGL FFAT+ +V SDP+SK AV R + Sbjct: 44 PPLAPFARLPPESEKLVEQYDAIWDDGVAPEVTLDFDCQHISSGEGLAMWLGGLGFFATLYQVVKASDPQSKNPAVNRKM 123
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: K8YRF0_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC) HSP 1 Score: 87.8 bits (216), Expect = 4.160e-19 Identity = 50/112 (44.64%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 18 RMSLRHAIRRGGGVXXXXXXXXXXXXXXGPSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLP 353 R R A+R GGG GP M PF R + L E HEL+WDD VA E IDFDA + T EA WW GG FF +LGLVAL+DP S V ++ T+P Sbjct: 24 RSFTRSAVRAGGGAGHNP----------GPPMQPFKRTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALTDPASVNPCVNKAETMP 125
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: A0A6V1PJS4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PJS4_HETAK) HSP 1 Score: 87.4 bits (215), Expect = 4.540e-19 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 117 PFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLP 353 PFAR +L E HELVWDDGVA E +DFD P + + + L W GG FF TV+GLV+LSDP +K PRS LP Sbjct: 34 PFARTIAPVSKLHEEHELVWDDGVAAEACLDFDVPEVPSHKGLAWLMGGFGFFGTVMGLVSLSDPAAKCTTAPRSTVLP 112
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Match: M4B8H2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8H2_HYAAE) HSP 1 Score: 88.2 bits (217), Expect = 2.120e-18 Identity = 45/83 (54.22%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 105 PSMPPFARNKPVDYQLDENHELVWDDGVAPETTIDFDAPHMSTSEALGWWGGGLAFFATVLGLVALSDPESKREAVPRSVTLP 353 P PPFAR K L E ELVW+DGV+PET IDFDAPH+ +AL W GL FF T++G+V L P+S R+AV R LP Sbjct: 20 PPPPPFARLKAPAQPLHEEAELVWNDGVSPETLIDFDAPHIPKYQALRHWLCGLGFFVTLMGVVTLYGPDSWRQAVKRETCLP 102 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8779.20391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8779.20391.1 >prot_M-pyrifera_M_contig8779.20391.1 ID=prot_M-pyrifera_M_contig8779.20391.1|Name=mRNA_M-pyrifera_M_contig8779.20391.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp MSLRHAIRRGGGVIASSSARQVARGGGGPSMPPFARNKPVDYQLDENHELback to top mRNA from alignment at M-pyrifera_M_contig8779:6394..9693- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8779.20391.1 ID=mRNA_M-pyrifera_M_contig8779.20391.1|Name=mRNA_M-pyrifera_M_contig8779.20391.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3300bp|location=Sequence derived from alignment at M-pyrifera_M_contig8779:6394..9693- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8779:6394..9693- >mRNA_M-pyrifera_M_contig8779.20391.1 ID=mRNA_M-pyrifera_M_contig8779.20391.1|Name=mRNA_M-pyrifera_M_contig8779.20391.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig8779:6394..9693- (Macrocystis pyrifera P11B4 male)back to top |