mRNA_M-pyrifera_M_contig87671.20370.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87671.20370.1
Unique NamemRNA_M-pyrifera_M_contig87671.20370.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A7X5WP95_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WP95_9ACTN)

HSP 1 Score: 412 bits (1059), Expect = 9.830e-143
Identity = 202/266 (75.94%), Postives = 230/266 (86.47%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVREGRGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPL ALAA+AART R RLGT V++APL  PM +AEQAALVDVIS GRLELGLGAGYVAPEF A+G D++ RY DTDHALAE+ RI  DG CTPGPVQSPVP+WAGYLGPVGARRAGRLGVGL+T   +S+PIY +AL EAGH A+ ARMGGVVDFLVA+DPE+ FEQVLPHRTHQLNSYRQNA KG+G TPR+LT+++VREGRGSGVI PL +LT D+A A I +IC+GLPVEHL+ W SIGGMPE LVE QMGLVIDR+QPA+
Sbjct:   56 LPQPLAALAAVAARTRRARLGTAVLLAPLQPPMLIAEQAALVDVISGGRLELGLGAGYVAPEFEAYGVDISRRYLDTDHALAEVGRILTDGGCTPGPVQSPVPIWAGYLGPVGARRAGRLGVGLLTHRRDSFPIYHEALVEAGHDATTARMGGVVDFLVAEDPERTFEQVLPHRTHQLNSYRQNAAKGTGRTPRMLTEEEVREGRGSGVIAPLRVLTPDDAAAEIAAICEGLPVEHLFFWASIGGMPEELVEAQMGLVIDRVQPAV 321          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A7K1Z754_9ACTN (LLM class flavin-dependent oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z754_9ACTN)

HSP 1 Score: 394 bits (1011), Expect = 2.260e-135
Identity = 196/266 (73.68%), Postives = 220/266 (82.71%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVREGRGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            +P PLTALAA AART + RLGT VV+APL HPMA+AEQAA+VDVIS GRLELGLGAGYVAPEF AFGADL  RYRDTDHAL EI RI AD  CTPGPVQ PVPLWAGYLGP GA RAGRLGVGL+T N +S+ IYRDAL  +GH    ARMGGVVDFLVADDPE+ FE+++PHRTHQLNSYRQ A  G+G TPR LT+D+VREG GSGV+G + ILTVDEA+ RI  IC+GLPVEHLYLW SIG MPE L E+QM L+  ++QPAL
Sbjct:   60 MPVPLTALAAAAARTKQARLGTAVVVAPLQHPMAIAEQAAVVDVISGGRLELGLGAGYVAPEFEAFGADLGRRYRDTDHALGEIGRIFADRRCTPGPVQLPVPLWAGYLGPQGAARAGRLGVGLLTHNRDSFAIYRDALEASGHGVEVARMGGVVDFLVADDPEEAFERIVPHRTHQLNSYRQQAALGTGRTPRRLTEDEVREGSGSGVVGAMQILTVDEAITRIAGICEGLPVEHLYLWASIGAMPEDLAERQMELLTGQVQPAL 325          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: UPI000DD7F9F3 (LLM class flavin-dependent oxidoreductase n=1 Tax=Streptomyces triticisoli TaxID=2182797 RepID=UPI000DD7F9F3)

HSP 1 Score: 268 bits (684), Expect = 8.950e-86
Identity = 145/269 (53.90%), Postives = 185/269 (68.77%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTP--RLLTDDDVREGRGSGVIGP-LDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPLT  AA+AART+  R+GT +++A L HP   AE+AA+VD++S GRLELG+GAG+V  E+ AFGADL  RY  TD A AEI R+ A+ V TP P+Q+PVPLW GY GP GARRAGRLG GL++ +      Y + L E GH  SAARMGG++D +VADDPE+ F ++LPH  HQLNSYR+    GS      R LT +DV  G   G   P L +LT  +AV  IR   +GLPVEH+YLW S+ GMPE LV++ + L+  ++ PAL
Sbjct:   54 LPQPLTFAAAVAARTSTVRIGTAILLAALRHPRHTAEEAAVVDLVSGGRLELGIGAGFVQREYDAFGADLRRRYSLTDTATAEIRRLLAEEV-TPPPIQNPVPLWMGYQGPQGARRAGRLGTGLLSLDPRLLEPYTEGLVEGGHDPSAARMGGMLDIIVADDPEEAFARILPHYVHQLNSYRRMHAGGSPSPQPYRDLTAEDVLAGAAEGSRVPGLTVLTAQDAVRTIRERTEGLPVEHVYLWASVAGMPEDLVQRHVELLFGKVAPAL 321          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A6I3EZC5_9ACTN (LLM class flavin-dependent oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A6I3EZC5_9ACTN)

HSP 1 Score: 266 bits (679), Expect = 4.230e-85
Identity = 139/268 (51.87%), Postives = 185/268 (69.03%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGH-TPRLLTDDDVREG-RGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPLT  AA AART+R R+GT V++A L   + +AE+AA+VD IS GRLELG+GAGY  PE+  +  D+ +RY  TD A+AEI R+  +G+ TP   Q+P P+W GY GP GARRAGRLGVGL++ +      YR+ L E GH  + AR GG++D +VADDPE  FE++LPH  HQLN+YR  A  G+G  TPR +T + +R G   +G I  L +LT D+AVA IR   +G PVEH+YLW S+ GMP  LV++ + LV  R++P+L
Sbjct:   54 LPQPLTFAAAAAARTSRIRIGTAVLVAALRPAVLVAEEAAIVDQISGGRLELGIGAGYSVPEYEIYATDITKRYGLTDAAVAEIRRLLDNGIVTPPAAQNPFPIWLGYQGPQGARRAGRLGVGLLSLDRALLEPYREGLIEGGHDTALARTGGMMDIIVADDPESAFERILPHYAHQLNTYRAAAVAGTGRDTPREITVEKLRSGVTNNGQIPGLRVLTPDDAVAAIRDATEGSPVEHVYLWASVAGMPADLVDRHIELVCTRVRPSL 321          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: UPI0020180D21 (LLM class flavin-dependent oxidoreductase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI0020180D21)

HSP 1 Score: 263 bits (673), Expect = 9.800e-84
Identity = 142/267 (53.18%), Postives = 177/267 (66.29%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVREGR-GSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPLT LAA+AART R  +GT VV+A L     +AE+AA+VD +S GRLELG+GAGYVA E+  +  D+  RY  TD A+AEI R+  DGV TPGP Q P PLW GY GP GARRAGRLGVGL++ +      YRD L E GH  + AR GG++D +VA DPE   E++LPH  HQ NSY   A  G+G  PR+LT + V   R G G +  L +LT DEAVA IR      PVEH+YLW SI  MP+ LVE+ + L+  +++P L
Sbjct:   89 LPQPLTFLAAVAARTRRMTIGTAVVLAALRPAPLVAEEAAVVDQLSGGRLELGIGAGYVAREYELYDRDITRRYGLTDAAVAEIRRLLDDGVVTPGPAQRPFPLWLGYQGPQGARRAGRLGVGLLSLDRSLLEPYRDGLVEGGHDPATARTGGLLDIVVAGDPEATLERILPHYLHQANSYGAAAAAGTGREPRVLTAEKVLSRRTGPGSVPGLRVLTPDEAVAAIREAVADSPVEHVYLWASIAAMPDDLVEEHVELLFTQVRPRL 355          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A6B1BZX4_9ACTN (LLM class flavin-dependent oxidoreductase n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1BZX4_9ACTN)

HSP 1 Score: 262 bits (670), Expect = 1.030e-83
Identity = 136/259 (52.51%), Postives = 177/259 (68.34%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVREGRGS-GVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLV 774
            LPQPLT  AA+AART R R+GT V++APL     +AE+AA+ D ISNGR++LGLGAGYV  EF A+GADL++RY  TD  + E+  +   GV TP  VQ+P P+W GY GP GARRAGRLG GL++ N  S   Y + LAE GH  S ARM GVV  +VADDPE+ +E++LPH   QLN+YR     GSG TP  LT + +RE R + GVI P+++LT DEA+  +RS+ +G+P+   Y W SI GMP+ L  +   L+
Sbjct:   54 LPQPLTFAAAVAARTQRVRIGTAVLLAPLRLAPQIAEEAAVADQISNGRIDLGLGAGYVYDEFEAYGADLSKRYTITDQRVREVRELLDGGVVTPPAVQNPFPIWLGYNGPQGARRAGRLGCGLLSINHGSLEPYTEGLAEGGHDPSVARMAGVVSMVVADDPEEAYERILPHLAWQLNTYRAAGASGSGKTPSPLTVEKLRERRSTMGVISPMEVLTPDEAIEHLRSLSEGIPMVEAYCWASIAGMPDDLAHRHAELL 312          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: UPI00140AACFA (LLM class flavin-dependent oxidoreductase n=2 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI00140AACFA)

HSP 1 Score: 261 bits (666), Expect = 5.680e-83
Identity = 139/266 (52.26%), Postives = 179/266 (67.29%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVREGRGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            L QPLT  AA AART+R R+GT VV+A L HP  LAE+AA+VD+IS GRLELG+GAG+V  E+AAFG DLAERYR TD A+ E+ R+   GV +PGPVQ P P+W GY GP GARRAGR+G GL++ +      Y   LAE GH  S ARMGG++D +VA+DPE+   +VLPH  HQLNSYR+ A    G    L  ++   + RG G I  L +LT  EAVA IR    G+P  H+Y W S+ GMP+ +V + + L++  + PA+
Sbjct:   61 LSQPLTFAAAAAARTSRMRIGTAVVLAALRHPRHLAEEAAIVDLISAGRLELGIGAGFVEHEYAAFGRDLAERYRLTDDAVREVRRLL--GVVSPGPVQQPPPIWLGYQGPQGARRAGRMGTGLLSLDRRLLEPYAAGLAEGGHDPSTARMGGLLDLVVAEDPERTLARVLPHFVHQLNSYRRMAAGPRGTHRDLTVEEVAADTRGPGRIPGLSVLTPPEAVATIRRRTAGIPARHVYCWASVAGMPDDIVTEHLALLLGSVAPAV 324          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A6I1YSI5_9ACTN (LLM class flavin-dependent oxidoreductase n=3 Tax=unclassified Nocardioides TaxID=2615069 RepID=A0A6I1YSI5_9ACTN)

HSP 1 Score: 260 bits (665), Expect = 8.820e-83
Identity = 142/267 (53.18%), Postives = 182/267 (68.16%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDDVR-EGRGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            L QPLT  AA AART+R R+GT VV+A L HP  LAE+AA+VD++S GRLELG+GAG+VA E+AAFG DLA+RYR TD A+ E+ R+   GV +PGPVQ P PLW GY GP GARRAGR+G GL++ +      Y   LAE GH  S ARMGG++D +VA+DPE+   +VLPH  HQLNSYR+ A  G G   R LTD +V  + RG G I  L +LT  EA A IR    G+P  H+Y W S+ GMP+ +V + + L++  +  A+
Sbjct:   61 LSQPLTFAAAAAARTSRMRIGTAVVLAALRHPRHLAEEAAIVDLVSAGRLELGIGAGFVAHEYAAFGQDLAQRYRLTDDAVREVRRLL--GVVSPGPVQQPPPLWLGYQGPQGARRAGRMGTGLLSLDRRLLEPYAAGLAEGGHDPSTARMGGLLDLIVAEDPERTLARVLPHFVHQLNSYRRMAA-GPGAAHRDLTDQEVAADTRGPGRIPGLSVLTPQEATATIRRRTAGIPARHVYCWASVAGMPDDVVTEHLSLLLGPVTTAV 324          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A6I2X1J5_9ACTN (LLM class flavin-dependent oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A6I2X1J5_9ACTN)

HSP 1 Score: 259 bits (663), Expect = 1.110e-82
Identity = 140/268 (52.24%), Postives = 182/268 (67.91%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGH-TPRLLTDDDVREG-RGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPLT  AA AART+R  LGT VV+A L  PM +AE+AA+VD +S GRLELG+GAGYVA E+ ++GAD+ +RY  TD A+ EI R+  DGV TP  VQ P PLW GY GP GARRAGRLGVGL++ +      YR  L E GH  ++AR GG++D +VADDPE  FE++LPH  HQLNSYR     G+    P+ +T + +  G   +G I  L +L+  +AVA IR+  +  PVEH+YLW S+ GMP+ LVE+ M L+   ++P L
Sbjct:   54 LPQPLTMAAAAAARTSRITLGTAVVLAALRPPMLVAEEAAVVDQLSGGRLELGIGAGYVASEYQSYGADIEQRYSLTDAAVVEIRRLLDDGVVTPPAVQRPFPLWLGYQGPQGARRAGRLGVGLLSLDRSLLEPYRRGLLEGGHDPASARTGGMLDIIVADDPEAAFERILPHYVHQLNSYRAATVAGTDRPAPKEITAERLHGGVTAAGQIPGLRVLSPADAVAAIRAATNDAPVEHVYLWASVAGMPDDLVERHMQLLCTEVRPNL 321          
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Match: A0A6I3D614_9ACTN (LLM class flavin-dependent oxidoreductase n=7 Tax=root TaxID=1 RepID=A0A6I3D614_9ACTN)

HSP 1 Score: 258 bits (659), Expect = 4.460e-82
Identity = 136/268 (50.75%), Postives = 178/268 (66.42%), Query Frame = 1
Query:    1 LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRLELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQSPVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAARMGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGH-TPRLLTDDDVREGRGS-GVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEALVEQQMGLVIDRLQPAL 798
            LPQPLT  AA AART+R R+GT V++A L     +AE+AA++D +S GRLELG+GAGY  PE+  + AD+ +RY  TD A+AEI R+  DG+ TP   Q+P PLW GY GP GA+RAGRLGVGL++ +      YR+ L E GH    AR GG++D +VADDPE+ FE++LPH  HQLNSYR  A  GSG   P+ +T + +R G    G I  L +LT  +AV  IR   +G PVEH+YLW S+ GMP+ LVE  + L   ++ P L
Sbjct:   54 LPQPLTFAAAAAARTSRVRIGTAVLVAALRPAALVAEEAAVIDQLSGGRLELGIGAGYSVPEYELYNADITKRYGLTDSAVAEIRRLLDDGIVTPPAAQNPFPLWLGYQGPQGAKRAGRLGVGLLSLDPSLLDPYREGLIEGGHDPEIARTGGMLDIIVADDPEEAFERILPHYAHQLNSYRAAAVAGSGRDAPKEITVEKLRGGAAQKGQIPGLRVLTPTDAVTAIREATEGSPVEHVYLWASVAGMPDDLVEHHVELTCTQVAPNL 321          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87671.20370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WP95_9ACTN9.830e-14375.94LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A7K1Z754_9ACTN2.260e-13573.68LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
UPI000DD7F9F38.950e-8653.90LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A6I3EZC5_9ACTN4.230e-8551.87LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
UPI0020180D219.800e-8453.18LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A6B1BZX4_9ACTN1.030e-8352.51LLM class flavin-dependent oxidoreductase n=5 Tax=... [more]
UPI00140AACFA5.680e-8352.26LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A6I1YSI5_9ACTN8.820e-8353.18LLM class flavin-dependent oxidoreductase n=3 Tax=... [more]
A0A6I2X1J5_9ACTN1.110e-8252.24LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A6I3D614_9ACTN4.460e-8250.75LLM class flavin-dependent oxidoreductase n=7 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87671contigM-pyrifera_M_contig87671:2..802 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score261.9
Seed ortholog evalue3.2e-67
Seed eggNOG ortholog1323361.JPOC01000048_gene409
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Luciferase-like monooxygenase
EggNOG OGs2GMUP@201174,4G2UX@85025,COG2141@1,COG2141@2
COG Functional cat.C
Best tax levelNocardiaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size801
Cds size801
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816785.9153547-CDS-M-pyrifera_M_contig87671:1..8021622816785.9153547-CDS-M-pyrifera_M_contig87671:1..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87671 2..802 +
1692278177.5667021-CDS-M-pyrifera_M_contig87671:1..8021692278177.5667021-CDS-M-pyrifera_M_contig87671:1..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87671 2..802 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87671.20370.1prot_M-pyrifera_M_contig87671.20370.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87671 2..802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87671.20370.1

>prot_M-pyrifera_M_contig87671.20370.1 ID=prot_M-pyrifera_M_contig87671.20370.1|Name=mRNA_M-pyrifera_M_contig87671.20370.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
LPQPLTALAAIAARTTRCRLGTGVVIAPLAHPMALAEQAALVDVISNGRL
ELGLGAGYVAPEFAAFGADLAERYRDTDHALAEIARIHADGVCTPGPVQS
PVPLWAGYLGPVGARRAGRLGVGLMTWNAESWPIYRDALAEAGHPASAAR
MGGVVDFLVADDPEQMFEQVLPHRTHQLNSYRQNATKGSGHTPRLLTDDD
VREGRGSGVIGPLDILTVDEAVARIRSICDGLPVEHLYLWGSIGGMPEAL
VEQQMGLVIDRLQPALE
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mRNA from alignment at M-pyrifera_M_contig87671:2..802+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87671.20370.1 ID=mRNA_M-pyrifera_M_contig87671.20370.1|Name=mRNA_M-pyrifera_M_contig87671.20370.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig87671:2..802+ (Macrocystis pyrifera P11B4 male)
CTCCCCCAGCCGCTCACCGCGCTGGCTGCGATCGCGGCCCGCACGACCCG CTGCCGACTCGGCACCGGAGTCGTGATCGCACCACTGGCGCACCCGATGG CGCTCGCCGAGCAGGCGGCCCTCGTCGACGTCATCAGCAATGGCCGGCTC GAGCTGGGCCTCGGTGCCGGCTATGTCGCGCCCGAGTTCGCCGCCTTCGG GGCCGACCTCGCCGAGCGCTACCGAGACACCGACCACGCCCTGGCCGAGA TCGCGAGAATCCACGCCGACGGGGTGTGCACCCCCGGACCGGTCCAGTCC CCGGTGCCCTTGTGGGCCGGCTATCTGGGTCCGGTGGGGGCTCGCCGGGC CGGTCGCCTCGGGGTCGGGCTGATGACCTGGAACGCCGAGAGTTGGCCCA TCTATCGTGACGCCCTCGCCGAGGCCGGTCATCCGGCGTCGGCGGCCCGG ATGGGAGGCGTCGTCGACTTTCTCGTCGCCGACGATCCGGAGCAGATGTT CGAGCAGGTGCTGCCCCATCGCACGCATCAACTCAACAGCTATCGCCAGA ATGCGACCAAGGGTTCGGGCCACACGCCTCGTCTGCTCACCGACGACGAC GTGCGCGAGGGGAGGGGATCGGGTGTCATCGGCCCGCTCGACATCCTCAC GGTCGACGAAGCCGTCGCCCGGATTCGGTCGATCTGCGACGGGCTGCCCG TCGAACACCTCTATCTCTGGGGCTCGATCGGTGGGATGCCCGAGGCGCTC GTCGAGCAGCAGATGGGGCTCGTGATCGATCGGCTCCAGCCGGCGCTCGA G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87671:2..802+

>mRNA_M-pyrifera_M_contig87671.20370.1 ID=mRNA_M-pyrifera_M_contig87671.20370.1|Name=mRNA_M-pyrifera_M_contig87671.20370.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig87671:2..802+ (Macrocystis pyrifera P11B4 male)
CTCCCCCAGCCGCTCACCGCGCTGGCTGCGATCGCGGCCCGCACGACCCG
CTGCCGACTCGGCACCGGAGTCGTGATCGCACCACTGGCGCACCCGATGG
CGCTCGCCGAGCAGGCGGCCCTCGTCGACGTCATCAGCAATGGCCGGCTC
GAGCTGGGCCTCGGTGCCGGCTATGTCGCGCCCGAGTTCGCCGCCTTCGG
GGCCGACCTCGCCGAGCGCTACCGAGACACCGACCACGCCCTGGCCGAGA
TCGCGAGAATCCACGCCGACGGGGTGTGCACCCCCGGACCGGTCCAGTCC
CCGGTGCCCTTGTGGGCCGGCTATCTGGGTCCGGTGGGGGCTCGCCGGGC
CGGTCGCCTCGGGGTCGGGCTGATGACCTGGAACGCCGAGAGTTGGCCCA
TCTATCGTGACGCCCTCGCCGAGGCCGGTCATCCGGCGTCGGCGGCCCGG
ATGGGAGGCGTCGTCGACTTTCTCGTCGCCGACGATCCGGAGCAGATGTT
CGAGCAGGTGCTGCCCCATCGCACGCATCAACTCAACAGCTATCGCCAGA
ATGCGACCAAGGGTTCGGGCCACACGCCTCGTCTGCTCACCGACGACGAC
GTGCGCGAGGGGAGGGGATCGGGTGTCATCGGCCCGCTCGACATCCTCAC
GGTCGACGAAGCCGTCGCCCGGATTCGGTCGATCTGCGACGGGCTGCCCG
TCGAACACCTCTATCTCTGGGGCTCGATCGGTGGGATGCCCGAGGCGCTC
GTCGAGCAGCAGATGGGGCTCGTGATCGATCGGCTCCAGCCGGCGCTCGA
GCTCCCCCAGCCGCTCACCGCGCTGGCTGCGATCGCGGCCCGCACGACCC
GCTGCCGACTCGGCACCGGAGTCGTGATCGCACCACTGGCGCACCCGATG
GCGCTCGCCGAGCAGGCGGCCCTCGTCGACGTCATCAGCAATGGCCGGCT
CGAGCTGGGCCTCGGTGCCGGCTATGTCGCGCCCGAGTTCGCCGCCTTCG
GGGCCGACCTCGCCGAGCGCTACCGAGACACCGACCACGCCCTGGCCGAG
ATCGCGAGAATCCACGCCGACGGGGTGTGCACCCCCGGACCGGTCCAGTC
CCCGGTGCCCTTGTGGGCCGGCTATCTGGGTCCGGTGGGGGCTCGCCGGG
CCGGTCGCCTCGGGGTCGGGCTGATGACCTGGAACGCCGAGAGTTGGCCC
ATCTATCGTGACGCCCTCGCCGAGGCCGGTCATCCGGCGTCGGCGGCCCG
GATGGGAGGCGTCGTCGACTTTCTCGTCGCCGACGATCCGGAGCAGATGT
TCGAGCAGGTGCTGCCCCATCGCACGCATCAACTCAACAGCTATCGCCAG
AATGCGACCAAGGGTTCGGGCCACACGCCTCGTCTGCTCACCGACGACGA
CGTGCGCGAGGGGAGGGGATCGGGTGTCATCGGCCCGCTCGACATCCTCA
CGGTCGACGAAGCCGTCGCCCGGATTCGGTCGATCTGCGACGGGCTGCCC
GTCGAACACCTCTATCTCTGGGGCTCGATCGGTGGGATGCCCGAGGCGCT
CGTCGAGCAGCAGATGGGGCTCGTGATCGATCGGCTCCAGCCGGCGCTCG
AG
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