mRNA_M-pyrifera_M_contig87647.20358.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: A0A7S4I440_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I440_9EUKA) HSP 1 Score: 124 bits (310), Expect = 4.500e-30 Identity = 69/140 (49.29%), Postives = 96/140 (68.57%), Query Frame = 1 Query: 142 SIDNFIALVNQARA-AEKNEARVNNLTALLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRAGSRTVGMEEFLASPTFANGELVQSIAVHLTSPDVRFSTYKAALRPQNSHAYINAAMQVTL 558 SI I ++Q +A +E + A + A++ H ++ANVHVR+ GS+ GNL +AKS GF+SDLAT+LLGA ATVTL S+ SR + MEEFLA+P + N E+++SI V D +++YK A+RP NSHA INAA T+ Sbjct: 159 SIAKLIEALSQVKANSEASGANARYMEAMITHCERIANVHVRNVGSIGGNLALAKSKGFVSDLATVLLGANATVTLQSKEKSRKISMEEFLATPEW-NQEIMRSITVPFLDDDQTYNSYKTAIRPVNSHALINAAFLATV 297
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: UPI000D1CBB3C (probable aldehyde oxidase 1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CBB3C) HSP 1 Score: 82.4 bits (202), Expect = 5.740e-15 Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRA-GSRTVGMEEFLASPTFANGELVQSIAV-HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQVTL 558 L H KVA +HVR+AGSV GNL++A+ LGF SD+AT+L+GA A+V + ++ G +E+F+A+ T+ +++SI + + DVRF +Y+A+ RP N+ AY+NAA V L Sbjct: 194 LAEHMRKVATLHVRNAGSVGGNLILAQKLGFDSDIATLLVGAGASVKVVTQKFGESRQSVEDFVAA-TWDGKSILKSICIPSYSKQDVRFDSYRASPRPLGNAVAYVNAAFLVNL 307
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: D8S840_SELML (Uncharacterized protein AO1B-2 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S840_SELML) HSP 1 Score: 82.4 bits (202), Expect = 5.870e-15 Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRA-GSRTVGMEEFLASPTFANGELVQSIAV-HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQVTL 558 L H KVA +HVR+AGSV GNL++A+ LGF SD+AT+L+GA A+V + ++ G +E+F+A+ T+ +++SI + + DVRF +Y+A+ RP N+ AY+NAA V L Sbjct: 81 LAEHMRKVATLHVRNAGSVGGNLILAQKLGFDSDIATLLVGAGASVKVVTQKFGESRQSVEDFVAA-TWDGKSILKSICIPSYSKQDVRFDSYRASPRPLGNAVAYVNAAFLVNL 194
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: A0A7S2MZI8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MZI8_9DINO) HSP 1 Score: 77.8 bits (190), Expect = 2.300e-14 Identity = 50/131 (38.17%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 181 AAEKNEARVNNLTALLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRAGSRT-VGMEEFLAS----PTFANGELVQSIAVHLTSPDVRFSTYKAALRPQNSHAYINAAMQVTL 558 A+E+ + + L L+ HA ++A +R+ G++ GNL+M K+ GF SDLATIL G A V + G + M++F + P +A L++SI V P F ++K A+RPQNSHA +NAA +V + Sbjct: 61 ASEEGKEELAALPVLVEHARRIAGHGIRNWGTIGGNLMMTKAKGFQSDLATILTGVGAKVAMVDSDGKEEELEMDKFYSVEYKLPKYA---LLKSIFVPFLEPGEVFRSFKTAVRPQNSHAIVNAAFRVKM 188
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: D8S842_SELML (Uncharacterized protein AO1C-2 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S842_SELML) HSP 1 Score: 80.1 bits (196), Expect = 3.210e-14 Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRA-GSRTVGMEEFLASPTFANGELVQSIAV--HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQVTL 558 L H KVA +HVR+AGSV GNL++A+ LGF SD+AT+L+GA A+V + ++ G +E+F+A+ T+ +++SI + + +VRF +Y+A+ RP N+ AY+NAA V L Sbjct: 81 LAEHMRKVATLHVRNAGSVGGNLILAQKLGFDSDIATLLVGAGASVKVVTQKFGESRQSVEDFVAA-TWDGKSILKSICIPSYSKQDNVRFDSYRASPRPLGNAVAYVNAAFLVNL 195
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: UPI000D1CACA0 (indole-3-acetaldehyde oxidase n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CACA0) HSP 1 Score: 80.1 bits (196), Expect = 3.430e-14 Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRA-GSRTVGMEEFLASPTFANGELVQSIAV--HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQVTL 558 L H KVA +HVR+AGSV GNL++A+ LGF SD+AT+L+GA A+V + ++ G +E+F+A+ T+ +++SI + + +VRF +Y+A+ RP N+ AY+NAA V L Sbjct: 156 LAEHMRKVATLHVRNAGSVGGNLILAQKLGFDSDIATLLVGAGASVKVVTQKFGESRQSVEDFVAA-TWDGKSILKSICIPSYSKQDNVRFDSYRASPRPLGNAVAYVNAAFLVNL 270
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: D8S844_SELML (Uncharacterized protein AO1-2 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S844_SELML) HSP 1 Score: 80.1 bits (196), Expect = 3.870e-14 Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRA-GSRTVGMEEFLASPTFANGELVQSIAV--HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQVTL 558 L H KVA +HVR+AGSV GNL++A+ LGF SD+AT+L+GA A+V + ++ G +E+F+A+ T+ +++SI + + +VRF +Y+A+ RP N+ AY+NAA V L Sbjct: 325 LAEHMRKVATLHVRNAGSVGGNLILAQKLGFDSDIATLLVGAGASVKVVTQKFGESRQSVEDFVAA-TWDGKSILKSICIPSYSKQDNVRFDSYRASPRPLGNAVAYVNAAFLVNL 439
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: A0A3Q7J0Q1_SOLLC (Uncharacterized protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A3Q7J0Q1_SOLLC) HSP 1 Score: 78.6 bits (192), Expect = 1.420e-13 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRAGSRTVGMEEFLASPTFANGELVQSIAV--------HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQ 549 L +H K+A+ VR++ SV GNLVMA+ GF SD+AT+LLG ATV+L + G + EE L+ P + ++ S+ + H T F TY+AA RP N+ AY+NAA Q Sbjct: 2403 LAYHMEKIASPFVRNSASVGGNLVMAQKNGFPSDIATLLLGLSATVSLMTSHGPENLTWEELLSRPPIDSKTVLLSVCIPFKKDQSSHQTHSRFLFETYRAAPRPHGNALAYVNAAFQ 2520
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: A0A0G4G738_VITBC (FAD-binding PCMH-type domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G738_VITBC) HSP 1 Score: 78.2 bits (191), Expect = 1.770e-13 Identity = 51/133 (38.35%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVT-------------------LASRAGSRTVGMEEFLASPTFANGE--LVQSIAVHLTSPDVRFSTYKAALRPQNSHAYINAAMQVTL 558 L H + VAN HVR+ S AGNLVMA+ GF SDLATIL GA+AT+T + ++ +R + + +F+ + +F G+ V+ + + + D T++AALRPQNSHA +NAA L Sbjct: 116 LASHIHMVANWHVRNVASWAGNLVMAREKGFPSDLATILSGADATLTVDLITTTTPTSSSKEEEGSIHAQPETRVMTVLDFVRTESFGEGKRAFVRQLHLPASGADQHMRTFRAALRPQNSHALLNAAFNAKL 248
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Match: Q9FV25_SOLLC (Aldehyde oxidase n=8 Tax=Solanum TaxID=4107 RepID=Q9FV25_SOLLC) HSP 1 Score: 75.9 bits (185), Expect = 1.130e-12 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 223 LLHHANKVANVHVRHAGSVAGNLVMAKSLGFLSDLATILLGAEATVTLASRAGSRTVGMEEFLASPTFANGELVQSIAV--------HLTSPDVRFSTYKAALRPQ-NSHAYINAAMQ 549 L H K+A+ VR++ SV GNLVMA+ GF SD+AT+LLG ATV+L + G EE L+ P + ++ S+ + H T F TY+AA RP N+ AY+NAA Q Sbjct: 336 LADHMEKIASPFVRNSASVGGNLVMAQKNGFPSDIATLLLGLSATVSLMTSHGPENHTWEELLSRPPLDSKTVLLSVCIPFKKDQSSHQTHSRFLFETYRAAPRPHGNALAYVNAAFQ 453 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87647.20358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87647.20358.1 >prot_M-pyrifera_M_contig87647.20358.1 ID=prot_M-pyrifera_M_contig87647.20358.1|Name=mRNA_M-pyrifera_M_contig87647.20358.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp GSLWATRPWVSTRTRASVSWSTLAACLSSRLAQLGLRESLLAQXXXXSIDback to top mRNA from alignment at M-pyrifera_M_contig87647:1..558- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87647.20358.1 ID=mRNA_M-pyrifera_M_contig87647.20358.1|Name=mRNA_M-pyrifera_M_contig87647.20358.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig87647:1..558- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87647:1..558- >mRNA_M-pyrifera_M_contig87647.20358.1 ID=mRNA_M-pyrifera_M_contig87647.20358.1|Name=mRNA_M-pyrifera_M_contig87647.20358.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig87647:1..558- (Macrocystis pyrifera P11B4 male)back to top |