mRNA_M-pyrifera_M_contig87602.20350.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87602.20350.1
Unique NamemRNA_M-pyrifera_M_contig87602.20350.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A5A8EBY9_CAFRO (PPM-type phosphatase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBY9_CAFRO)

HSP 1 Score: 229 bits (585), Expect = 8.990e-71
Identity = 137/268 (51.12%), Postives = 177/268 (66.04%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKG-EDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKG----PEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            VFDGHG+HGHLVS HL    +RRV P +  E   +         Q   +PG   R ++ +AE++++   ++ T LSGSTA V +V+ + +TIANVGDSRA+L++    G AL P+ +T DHKPT   ET RIL+ GGELRAI Y DG +GP+RVW  G  D PGLAMSRSV D +GKRAGV SE  I  T L  +DAF++V SDGL+EF+  D+ C GIL A  E      P   L  A+ EL+AEA  R+LE+EG++DDTSI+LAEI
Sbjct:   16 VFDGHGDHGHLVSAHL----ERRV-PAILFEHTDD---------QLAADPGGCARTALAKAEAELISDPTVETGLSGSTAVVCIVQRDVVTIANVGDSRAMLVQT--DGRALIPKDLTADHKPTLPRETRRILLAGGELRAIRYPDGEEGPVRVWCGGGSDVPGLAMSRSVCDTVGKRAGVSSEPDITTTTLTKSDAFLVVASDGLWEFMEGDDVCTGILVAHGEAARAGDPASHLTRAVTELKAEAVHRWLEQEGAVDDTSIVLAEI 267          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A5A8CA37_CAFRO (PPM-type phosphatase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA37_CAFRO)

HSP 1 Score: 228 bits (581), Expect = 3.180e-68
Identity = 136/268 (50.75%), Postives = 177/268 (66.04%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKG-EDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKG----PEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            VFDGHG+HGHLVS HL    +RRV P +  E   +         Q   +PG   R ++ +AE++++   ++ T LSGSTA V +V+ + +TIANVGDSRA+L++    G AL P+ +T DHKPT   ET RIL+ GGELRAI Y DG +GP+RVW  G  D PGLAMSRSV D +GKRAGV SE  I  T L  +DAF++V SDGL+EF+  ++ C GIL A  E      P   L  A+ EL+AEA  R+LE+EG++DDTSI+LAEI
Sbjct:  183 VFDGHGDHGHLVSAHL----ERRV-PAILFEHTDD---------QLAADPGGCARTALAKAEAELISDPTVETGLSGSTAVVCIVQRDVVTIANVGDSRAMLVQT--DGRALIPKDLTADHKPTLPRETRRILLAGGELRAIRYPDGEEGPVRVWCGGGSDVPGLAMSRSVCDTVGKRAGVSSEPDITTTTLTKSDAFLVVASDGLWEFMEGEDVCTGILVAHGEAARAGDPASHLTRAVTELKAEAVHRWLEQEGAVDDTSIVLAEI 434          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A5A8CSS7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSS7_CAFRO)

HSP 1 Score: 228 bits (581), Expect = 3.670e-68
Identity = 136/268 (50.75%), Postives = 177/268 (66.04%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKG-EDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKG----PEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            VFDGHG+HGHLVS HL    +RRV P +  E   +         Q   +PG   R ++ +AE++++   ++ T LSGSTA V +V+ + +TIANVGDSRA+L++    G AL P+ +T DHKPT   ET RIL+ GGELRAI Y DG +GP+RVW  G  D PGLAMSRSV D +GKRAGV SE  I  T L  +DAF++V SDGL+EF+  ++ C GIL A  E      P   L  A+ EL+AEA  R+LE+EG++DDTSI+LAEI
Sbjct:  189 VFDGHGDHGHLVSAHL----ERRV-PAILFEHTDD---------QLAADPGGCARTALAKAEAELISDPTVETGLSGSTAVVCIVQRDVVTIANVGDSRAMLVQT--DGRALIPKDLTADHKPTLPRETRRILLAGGELRAIRYPDGEEGPVRVWCGGGSDVPGLAMSRSVCDTVGKRAGVSSEPDITTTTLTKSDAFLVVASDGLWEFMEGEDVCTGILVAHGEAARAGDPASHLTRAVTELKAEAVHRWLEQEGAVDDTSIVLAEI 440          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S2GN24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN24_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.580e-43
Identity = 103/266 (38.72%), Postives = 149/266 (56.02%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLL--SGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEIR 792
            V DGHGE+G +VSG L E     + P +         +V              LR SI  AE ++LK +    ++  SG+T    +VR +D+ +AN+GDSR         G A R   ++EDHKP   +E ARIL +GG + A++Y+DGIDGP RVW K  D PGLAMSRS+GD +   AGVIS+  I  +KL  + AF+++ SDGL+EF+ DD+C   ++        E       Q+L  EA  R+++ E  +DDT++IL  ++
Sbjct:  103 VMDGHGENGEIVSGFLKE-----IWPDLLASHPEFYTDVPTA-----------LRDSIATAEQELLKHKDYSKMVDFSGTTFVAAVVRDDDMWVANIGDSRITKATRTPNG-AFRAEAMSEDHKPDLPAEKARILEKGGRVFAVTYDDGIDGPHRVWLKNMDIPGLAMSRSLGDTVAHSAGVISDPEITHSKLTSDTAFLVLASDGLWEFM-DDQCVVDMVAQNQTDDTET----ICQKLIDEAKKRWMDEEEVVDDTTVILVHMQ 346          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A6S8ZMK7_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZMK7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.860e-41
Identity = 102/264 (38.64%), Postives = 144/264 (54.55%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPN-DAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            V DGHGEHG        +GV       +A E   +   V  +++   +        +I + E  +++   I T  SG+T  + ++RG  IT  N+GDSR ++    ++G  L     T DHKP    E  RIL  GG + A+ Y+DGIDGP RVW    D PGLAMSRS+GD +   AGVIS+    + +L P+ D FI+V +DGL+EFVN+DE     +TA       KG  EA+  L  EA AR++  E  IDDT+I++A +
Sbjct:  130 VLDGHGEHG--------DGVSAVFRDALAAEMIKHPSWVTDVKKASAD--------AIAKVEHSVIRNFRIDTEFSGTTLSMAIIRGNKITGVNIGDSRVII--GKDEGGKLVAEEFTHDHKPDTPKEQERILAAGGRVFAVEYDDGIDGPPRVWLGHMDVPGLAMSRSLGDAVAHTAGVISDPEFTERELDPSSDKFIVVATDGLWEFVNNDETVD--MTA-----KMKGPAEAVDYLVKEANARWMHEEQVIDDTTIVVANL 368          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S1FYJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYJ8_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.090e-41
Identity = 99/261 (37.93%), Postives = 145/261 (55.56%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPN-DAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIIL 780
            VFDGHGE G  VS +     K+ +    +  S   +  V  + R+            IL  E +I +   I T  SG+T  +V+VRG+ IT  N+GDSRAV+ +A   G        T DHKP +  E  RIL  GG + A+ Y+DGIDGP RVW    D PGLAMSRS+GD++   AGVISE    +  L  N D F+++ +DGL+EF+++++    +  +       + L E++ +L AEA  R+++ E  IDDT++I+
Sbjct:  112 VFDGHGEFGDKVSEYYE---KKLIEAMFSHPSWPTD--VKSVSREV-----------ILRLEQEITRNPRINTNFSGTTLTMVIVRGDHITGVNIGDSRAVIGKAGPDG-KFYAEEFTHDHKPDSPGEKERILAAGGRVFAVEYDDGIDGPPRVWLAEMDVPGLAMSRSIGDDIAHTAGVISEPEFTECVLNKNTDKFVIIATDGLWEFIDNEQSVQMVANS-------ENLKESVDKLVAEANDRWMQEEQVIDDTTVIV 348          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S1E6R1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E6R1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.760e-40
Identity = 97/264 (36.74%), Postives = 143/264 (54.17%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPN-DAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            V DGHGEHG  VS    E +   +    A ++   +                    +I + E  +++  +I T  SG+T  + +VRG  +T  N+GDSR +L  A E+     P  +T DHKP ++ E  RI+  GG + A+ Y+DGIDGP RVW    D PGLAMSRS+GD +   AGVIS+    +  L P  D F++V +DGL+EF+N+ E      T    +G ++G  EA+  L  E++ R++  E  IDDT+II+A +
Sbjct:   12 VLDGHGEHGDGVSAAFREQLATEMFNHPAWKTDVKKASAA----------------AIAKIEDGVIRNFTIDTEFSGTTLSMAIVRGNKLTGVNIGDSRVIL--AKEEAGQFVPLDITFDHKPDSKKEKERIIACGGRVFAVEYDDGIDGPPRVWLGHMDVPGLAMSRSLGDAVAHTAGVISDPEFTEHDLNPETDKFLVVATDGLWEFINNKE------TIDITEG-QQGPTEAVDVLIKESSLRWMREEQVIDDTTIIVANL 250          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S3V0J5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0J5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.310e-40
Identity = 98/261 (37.55%), Postives = 151/261 (57.85%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTA-LRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIIL 780
            VFDGHGE+GH+VS H      +  LP + R +   E           E  G+ L+ +++  E++I+   S+ T LSG+TA V L+R   + +ANVGDSR +    +  G+  +  + ++ DHKP  ++E  RI   GG + A+ Y+DGIDGP RVW    D PGLAMSRS+ D + K AGV+SEA + +   Q  D F+++ +DGL+EF++  E    +    +   P+     A+ EL  E+ +R+++ E  IDDT+II+
Sbjct:  265 VFDGHGENGHIVSQHF-----QTRLPTLLRHAKGFERN---------ERVGQTLKEALIIIENEIINDCSVDTTLSGTTAVVSLLRRNSLFVANVGDSRIIKGYTSGNGSNNILAQDLSLDHKPDLKAEQDRIEKCGGRVFAMKYDDGIDGPARVWLSYCDMPGLAMSRSLCDTVAKEAGVVSEAELFEFTFQGVDKFVVLATDGLWEFMSSQEVADIVAKHISPPNPKA----AIHELVQESNSRWMKEEPVIDDTTIIV 507          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S1GED7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GED7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.170e-40
Identity = 99/264 (37.50%), Postives = 145/264 (54.92%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEIR 792
            V DGHGE G LVS +  + +  RV                    +   EPG+ + + + + E  +L   SI T  SG+TA    +R + +T+AN+GDSR +L      G  L+   V+ DHKP    E  RI   GG + A+ Y+DGIDGP RVW    D PGLAM+RS+GD +   AGVISE  + +  L   D  +++ SDGL+EF ++ E    ++   A K P+K    A+  L AEA+AR+++ E  +DDT+II+A ++
Sbjct:  225 VLDGHGEAGDLVSHYFTDRIANRVYR----------------NPKWATEPGKAIAQEVAKLERAVLADASIDTEFSGTTAVFATIREDTLTVANIGDSRIILGRQDAAG-KLKAVEVSIDHKPDREDEMKRIKAAGGRVFAVEYDDGIDGPPRVWLGHMDIPGLAMARSLGDTVAHTAGVISEPEMHEVTLTDADKIMVIASDGLWEFCSNQEVIDMVVGTGA-KEPKK----AVDLLVAEASARWMKEEQVVDDTTIIVAYLK 466          
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Match: A0A7S1D593_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D593_CYCTE)

HSP 1 Score: 149 bits (376), Expect = 5.870e-40
Identity = 97/264 (36.74%), Postives = 141/264 (53.41%), Query Frame = 1
Query:    1 VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEPGELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRAVLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDGPMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPN-DAFILVGSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLEREGSIDDTSIILAEI 789
            V DGHGEHG  V+    E +   +    A  +   +   +                +I + E  +++   I T  SG+T  + +VRG  +T  NVGDSR +L    E+  +L    +T DHKP +  E  RIL  GG + A+ Y+DGIDGP RVW    D PGLAMSRS+GD +   AGVISE    + +L P  D F++V +DGL+EFV++ E    +    ++ GP     EA+  L  E++ R++  E  IDDT+II+A +
Sbjct:   45 VLDGHGEHGDSVAASFREQLAAEMFNHPAWPTDVKKASAD----------------AIAKIEHGVIRNFRIDTEFSGTTLSMAIVRGNQLTGVNVGDSRVIL--GLEENGSLGSAEITFDHKPDSPKEKERILACGGRVFAVEYDDGIDGPPRVWLGHMDVPGLAMSRSLGDAVAHTAGVISEPEFTERELNPKTDRFLVVATDGLWEFVDNQET---VDITVSQNGPT----EAVDVLVKESSMRWMREEQVIDDTTIIVANL 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87602.20350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EBY9_CAFRO8.990e-7151.12PPM-type phosphatase domain-containing protein n=1... [more]
A0A5A8CA37_CAFRO3.180e-6850.75PPM-type phosphatase domain-containing protein n=2... [more]
A0A5A8CSS7_CAFRO3.670e-6850.75Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S2GN24_9STRA2.580e-4338.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S8ZMK7_9STRA1.860e-4138.64Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]
A0A7S1FYJ8_9STRA3.090e-4137.93Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1E6R1_9STRA1.760e-4036.74Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S3V0J5_9STRA2.310e-4037.55Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S1GED7_9STRA4.170e-4037.50Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1D593_CYCTE5.870e-4036.74Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87602contigM-pyrifera_M_contig87602:24..830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.4
Seed ortholog evalue6.1e-34
Seed eggNOG ortholog159749.K0SMM4
KEGG koko:K04403,ko:K14803
KEGG Pathwayko04010,ko04064,ko04380,ko04620,ko04621,ko04668,ko05140,ko05145,ko05168,ko05169,map04010,map04064,map04380,map04620,map04621,map04668,map05140,map05145,map05168,map05169
KEGG ModuleM00686
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Serine/threonine phosphatases, family 2C, catalytic domain
EggNOG OGs2XAGP@2836,COG0631@1,KOG0698@2759
Ec32 ortholog descriptionProtein phosphatase 2C (PP2C)-like domain
Ec32 orthologEc-13_001420.1
EC3.1.3.16
COG Functional cat.T
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03009
Exons1
Model size807
Cds size807
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816785.033278-CDS-M-pyrifera_M_contig87602:23..8301622816785.033278-CDS-M-pyrifera_M_contig87602:23..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87602 24..830 -
1692278176.9914787-CDS-M-pyrifera_M_contig87602:23..8301692278176.9914787-CDS-M-pyrifera_M_contig87602:23..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87602 24..830 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87602.20350.1prot_M-pyrifera_M_contig87602.20350.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87602 24..830 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87602.20350.1

>prot_M-pyrifera_M_contig87602.20350.1 ID=prot_M-pyrifera_M_contig87602.20350.1|Name=mRNA_M-pyrifera_M_contig87602.20350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
VFDGHGEHGHLVSGHLAEGVKRRVLPCVARESGANEEEVNRIRRQCREEP
GELLRRSILEAESDILKLESIPTLLSGSTACVVLVRGEDITIANVGDSRA
VLIEAAEQGTALRPRVVTEDHKPTNRSETARILIRGGELRAISYEDGIDG
PMRVWAKGEDAPGLAMSRSVGDEMGKRAGVISEATILQTKLQPNDAFILV
GSDGLFEFVNDDECCAGILTAFAEKGPEKGLGEALQELQAEAAARYLERE
GSIDDTSIILAEIRRTET*
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mRNA from alignment at M-pyrifera_M_contig87602:24..830-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87602.20350.1 ID=mRNA_M-pyrifera_M_contig87602.20350.1|Name=mRNA_M-pyrifera_M_contig87602.20350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig87602:24..830- (Macrocystis pyrifera P11B4 male)
GTGTTTGATGGACATGGGGAACATGGTCACTTGGTAAGTGGCCATTTGGC AGAGGGAGTGAAGCGTCGTGTGTTGCCTTGTGTGGCACGTGAAAGTGGGG CGAATGAGGAAGAAGTGAATCGTATTCGTCGTCAATGTAGAGAGGAACCA GGAGAATTGTTACGACGTTCCATTTTGGAAGCGGAAAGTGACATCCTCAA ATTGGAATCTATCCCTACTCTCTTGTCAGGATCTACTGCTTGTGTGGTTT TGGTACGAGGTGAAGATATTACAATCGCAAACGTTGGAGACTCCAGAGCT GTGTTGATTGAGGCTGCAGAACAAGGTACCGCACTTCGACCCAGAGTGGT CACAGAAGACCACAAACCCACCAACCGAAGTGAAACTGCGAGAATTCTCA TCCGAGGAGGTGAATTGCGAGCCATCAGCTACGAAGACGGAATAGATGGA CCAATGCGTGTGTGGGCCAAGGGAGAAGATGCCCCTGGCCTCGCCATGAG TCGATCGGTAGGAGATGAAATGGGAAAGCGTGCTGGTGTCATCAGCGAAG CCACCATCTTACAAACCAAGCTCCAGCCCAATGATGCCTTTATTCTTGTT GGTTCCGATGGATTGTTTGAATTTGTCAACGATGACGAGTGCTGTGCAGG GATCCTCACCGCATTTGCAGAAAAAGGGCCAGAAAAAGGGCTTGGAGAAG CACTCCAAGAGCTCCAAGCTGAAGCAGCGGCAAGATACCTCGAAAGGGAA GGATCTATTGATGATACCTCAATCATCCTCGCAGAAATCCGAAGAACGGA AACATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87602:24..830-

>mRNA_M-pyrifera_M_contig87602.20350.1 ID=mRNA_M-pyrifera_M_contig87602.20350.1|Name=mRNA_M-pyrifera_M_contig87602.20350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig87602:24..830- (Macrocystis pyrifera P11B4 male)
GTGTTTGATGGACATGGGGAACATGGTCACTTGGTAAGTGGCCATTTGGC
AGAGGGAGTGAAGCGTCGTGTGTTGCCTTGTGTGGCACGTGAAAGTGGGG
CGAATGAGGAAGAAGTGAATCGTATTCGTCGTCAATGTAGAGAGGAACCA
GGAGAATTGTTACGACGTTCCATTTTGGAAGCGGAAAGTGACATCCTCAA
ATTGGAATCTATCCCTACTCTCTTGTCAGGATCTACTGCTTGTGTGGTTT
TGGTACGAGGTGAAGATATTACAATCGCAAACGTTGGAGACTCCAGAGCT
GTGTTGATTGAGGCTGCAGAACAAGGTACCGCACTTCGACCCAGAGTGGT
CACAGAAGACCACAAACCCACCAACCGAAGTGAAACTGCGAGAATTCTCA
TCCGAGGAGGTGAATTGCGAGCCATCAGCTACGAAGACGGAATAGATGGA
CCAATGCGTGTGTGGGCCAAGGGAGAAGATGCCCCTGGCCTCGCCATGAG
TCGATCGGTAGGAGATGAAATGGGAAAGCGTGCTGGTGTCATCAGCGAAG
CCACCATCTTACAAACCAAGCTCCAGCCCAATGATGCCTTTATTCTTGTT
GGTTCCGATGGATTGTTTGAATTTGTCAACGATGACGAGTGCTGTGCAGG
GATCCTCACCGCATTTGCAGAAAAAGGGCCAGAAAAAGGGCTTGGAGAAG
CACTCCAAGAGCTCCAAGCTGAAGCAGCGGCAAGATACCTCGAAAGGGAA
GGATCTATTGATGATACCTCAATCATCCTCGCAGAAATCCGAAGAACGGA
AACATAAGTGTTTGATGGACATGGGGAACATGGTCACTTGGTAAGTGGCC
ATTTGGCAGAGGGAGTGAAGCGTCGTGTGTTGCCTTGTGTGGCACGTGAA
AGTGGGGCGAATGAGGAAGAAGTGAATCGTATTCGTCGTCAATGTAGAGA
GGAACCAGGAGAATTGTTACGACGTTCCATTTTGGAAGCGGAAAGTGACA
TCCTCAAATTGGAATCTATCCCTACTCTCTTGTCAGGATCTACTGCTTGT
GTGGTTTTGGTACGAGGTGAAGATATTACAATCGCAAACGTTGGAGACTC
CAGAGCTGTGTTGATTGAGGCTGCAGAACAAGGTACCGCACTTCGACCCA
GAGTGGTCACAGAAGACCACAAACCCACCAACCGAAGTGAAACTGCGAGA
ATTCTCATCCGAGGAGGTGAATTGCGAGCCATCAGCTACGAAGACGGAAT
AGATGGACCAATGCGTGTGTGGGCCAAGGGAGAAGATGCCCCTGGCCTCG
CCATGAGTCGATCGGTAGGAGATGAAATGGGAAAGCGTGCTGGTGTCATC
AGCGAAGCCACCATCTTACAAACCAAGCTCCAGCCCAATGATGCCTTTAT
TCTTGTTGGTTCCGATGGATTGTTTGAATTTGTCAACGATGACGAGTGCT
GTGCAGGGATCCTCACCGCATTTGCAGAAAAAGGGCCAGAAAAAGGGCTT
GGAGAAGCACTCCAAGAGCTCCAAGCTGAAGCAGCGGCAAGATACCTCGA
AAGGGAAGGATCTATTGATGATACCTCAATCATCCTCGCAGAAATCCGAA
GAACGGAAACATAA
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