mRNA_M-pyrifera_M_contig87585.20343.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87585.20343.1
Unique NamemRNA_M-pyrifera_M_contig87585.20343.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A2E2N5R6_9BACT (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N5R6_9BACT)

HSP 1 Score: 470 bits (1209), Expect = 6.690e-159
Identity = 257/276 (93.12%), Postives = 265/276 (96.01%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAK IEGELQSLPGARDVNANREVMITSLPIRYRHAELAA GLSPADAAEQVREAIYGEVVDTVNQGVRQYD+VVRLA  +RES+ QVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAV+SLNVAEGSNLGDLVAQVQERVDPIVQ A MTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIY+TEGGG I+NTLAL+G G  Y+PPVISIASLVGFITLFGIAVRNGILLINHY
Sbjct:  393 LRRVAKEIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAAGLSPADAAEQVREAIYGEVVDTVNQGVRQYDLVVRLAPEERESIAQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVVSLNVAEGSNLGDLVAQVQERVDPIVQSAGMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYLTEGGGPIANTLALVGIGGPYIPPVISIASLVGFITLFGIAVRNGILLINHY 668
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A7Z9PXY6_9BACT (Efflux RND transporter permease subunit n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PXY6_9BACT)

HSP 1 Score: 444 bits (1143), Expect = 1.500e-154
Identity = 241/262 (91.98%), Postives = 253/262 (96.56%), Query Frame = 1 
Query:   43 LPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            +PGARDVNANREV+ITSLPIRYRHAELAAVGLSPADAAEQVREA+YGEVVDTVNQGVRQYD+VVRLA  +RES RQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAV+SLNVAEGSNLGDLVAQVQERVDPIVQ A MTVSYGGQFEAQQSASRTILVAG+AVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIY++EGGG I+NTLAL+G G  Y+PPVISIASLVGFITLFGIAVRNGILLINHY
Sbjct:    1 MPGARDVNANREVLITSLPIRYRHAELAAVGLSPADAAEQVREALYGEVVDTVNQGVRQYDLVVRLAPEERESFRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVVSLNVAEGSNLGDLVAQVQERVDPIVQRAGMTVSYGGQFEAQQSASRTILVAGIAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYISEGGGPIANTLALVGIGGPYIPPVISIASLVGFITLFGIAVRNGILLINHY 262
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A812XWB5_9DINO (HelA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XWB5_9DINO)

HSP 1 Score: 486 bits (1251), Expect = 2.780e-154
Identity = 269/276 (97.46%), Postives = 271/276 (98.19%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEA MTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIY+TEG GAISNTLAL+G G  YVPPVISIASLVGFITLFGIAVRNGILLINHY
Sbjct: 4177 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEAGMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYLTEGAGAISNTLALVGIGGGYVPPVISIASLVGFITLFGIAVRNGILLINHY 4452
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A6M8VXQ9_9BACT (Efflux RND transporter permease subunit n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A6M8VXQ9_9BACT)

HSP 1 Score: 463 bits (1192), Expect = 4.870e-153
Identity = 253/276 (91.67%), Postives = 263/276 (95.29%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LR VAKAIE ELQSLPGARDVNANREV+ITSLPIRYRHAELAAVGLSPADAAEQVREA+YGEVVD VNQGVRQYD+VVRLA  +RES+RQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAV+SLNVAEGSNLGDLVAQVQERVDPIVQ A MTVSYGGQFEAQQSASRTILVAGVAV LIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIY+TEGGG + NTLALIG G  Y+PPV+SIASLVGFITLFGIAVRNGILLINHY
Sbjct:  688 LRDVAKAIEAELQSLPGARDVNANREVLITSLPIRYRHAELAAVGLSPADAAEQVREALYGEVVDKVNQGVRQYDLVVRLAPEERESIRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVVSLNVAEGSNLGDLVAQVQERVDPIVQRAGMTVSYGGQFEAQQSASRTILVAGVAVVLIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYITEGGGLVHNTLALIGIGGPYIPPVVSIASLVGFITLFGIAVRNGILLINHY 963
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A7X0H3Y7_9BACT (HME family heavy-metal exporter n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H3Y7_9BACT)

HSP 1 Score: 451 bits (1159), Expect = 2.820e-148
Identity = 244/276 (88.41%), Postives = 260/276 (94.20%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAK +EGELQ+LPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGE VD VN+G+RQYD+VVRLA   RES+RQVRDLLLRGRGGATVRL DVADIGPERSSNLITRENAQRKAVISLNVAE SNLGDLV QV+ERVDPIV EA MTVSYGGQFEAQQSASRTILVAG+ VA++ML+LLQISTGSMRAAVLVMLNMPLALIGGI AIY+TEGGGA+SNTLAL+G G  Y+PPVISIAS+VGFITLFGIAVRNGILLINHY
Sbjct:  690 LRRVAKKVEGELQALPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGERVDVVNEGIRQYDLVVRLAPDQRESIRQVRDLLLRGRGGATVRLRDVADIGPERSSNLITRENAQRKAVISLNVAEDSNLGDLVEQVRERVDPIVAEAGMTVSYGGQFEAQQSASRTILVAGLVVAVVMLLLLQISTGSMRAAVLVMLNMPLALIGGIVAIYLTEGGGAVSNTLALLGVGGDYIPPVISIASMVGFITLFGIAVRNGILLINHY 965
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A2E1VUN3_9BACT (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VUN3_9BACT)

HSP 1 Score: 444 bits (1141), Expect = 1.390e-145
Identity = 242/276 (87.68%), Postives = 255/276 (92.39%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LR VAK IE ELQ+LPGARDVNANREVMITSLPIRYRHAELAA GLSPADAAEQVREAIYGEVVDTVNQGVRQYD+VVRLA  +RESV+QVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEG+NLGDLVAQVQERVDPIVQ A MTVSYGGQFEAQQSASRTIL+AG+A+AL+M MLLQISTGSMRAA LVMLNMPLALIGGI AI++T G G   N LAL G G  YVPP++SIASLVGFITLFGIAVRNGILLINHY
Sbjct:  688 LRAVAKEIEAELQALPGARDVNANREVMITSLPIRYRHAELAAAGLSPADAAEQVREAIYGEVVDTVNQGVRQYDLVVRLAPDERESVQQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGANLGDLVAQVQERVDPIVQGAGMTVSYGGQFEAQQSASRTILIAGIAIALVMFMLLQISTGSMRAAALVMLNMPLALIGGIVAIFVTAGDGVALNALALAGIGGPYVPPIVSIASLVGFITLFGIAVRNGILLINHY 963
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A2E2N5J9_9BACT (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N5J9_9BACT)

HSP 1 Score: 437 bits (1123), Expect = 5.940e-143
Identity = 238/280 (85.00%), Postives = 260/280 (92.86%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMT----EGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAKAIEGEL  LPGARDVNANREV+ITSLPIRYRHAELAAVGL+PADAAEQVREA+YGEVVDTVNQGVR+YD+VVRLAA +R SV QVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAV+SLNVAEGSNLGDL+A V+ERVDPIV+ A MTV+YGGQFEAQ+SASRTI VAGV VA++ML+LLQISTGS+RAA+LVMLNMPLALIGGIAAIY+T    EG G ++NTLALIG G  Y PPVISIAS+VGFITLFGIAVRNGILL+NHY
Sbjct:  688 LRRVAKAIEGELSELPGARDVNANREVLITSLPIRYRHAELAAVGLTPADAAEQVREAVYGEVVDTVNQGVRRYDLVVRLAAEERASVAQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVVSLNVAEGSNLGDLIADVRERVDPIVRRAGMTVAYGGQFEAQRSASRTISVAGVVVAVVMLLLLQISTGSIRAALLVMLNMPLALIGGIAAIYLTNGLAEGVGPVANTLALIGIGGPYAPPVISIASMVGFITLFGIAVRNGILLVNHY 967
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BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A518CVW3_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CVW3_9BACT)

HSP 1 Score: 420 bits (1079), Expect = 1.570e-136
Identity = 225/276 (81.52%), Postives = 253/276 (91.67%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAKAIE EL+ +PG RDVNANREVMITSLPI+YRHAELAAVGL+PADAAEQV  A+YGEVVDTVNQG+R+YD+VVRLA   R S+ QVRDLLL GRGGATVRL DVAD+GPERSSNLITRENA+RKAV+SLNVAEG+NLGDLVAQVQ+RVDPIVQEA  TV YGGQFEAQ+SA+RTI ++G+AVAL+MLMLLQISTGS+RAA+LVMLNMPLALIGGIAAI++TEG G ++N LAL G G AYV PV+SIASLVGFITLFGIAVRNGILL+NHY
Sbjct:  688 LRRVAKAIEVELKGMPGTRDVNANREVMITSLPIQYRHAELAAVGLTPADAAEQVGAALYGEVVDTVNQGIRRYDLVVRLAPDQRTSIEQVRDLLLHGRGGATVRLRDVADLGPERSSNLITRENARRKAVVSLNVAEGANLGDLVAQVQQRVDPIVQEAGFTVVYGGQFEAQKSATRTIALSGLAVALVMLMLLQISTGSLRAALLVMLNMPLALIGGIAAIFLTEGAGGVNNMLALAGMGGAYVAPVLSIASLVGFITLFGIAVRNGILLVNHY 963
[Close]
BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A3M2CQK3_9BACT (Efflux RND transporter permease subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CQK3_9BACT)

HSP 1 Score: 417 bits (1071), Expect = 3.910e-135
Identity = 225/276 (81.52%), Postives = 251/276 (90.94%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LRRVAK+IEGEL++LPGARDVNANREVMITSLPIRYRH +LAAVGLSPADAAEQVREA+YGEVVDTV QG+RQYD+VVRLA  +R +++ V+DLLL GRGGA VRLSDVADIGPERSSNLI RENA+RKAV+SLNVAEGSNLGDLVA+V+ RVDP+V    MTVSY GQFEAQQSA+RTI +AGVAVA+ MLMLLQISTGS+RA++LVMLNMPLALIGGI AIY+TEG G I NTLAL+  G  YVPPVISIAS+VGFITLFGIAVRNGILLINHY
Sbjct:  688 LRRVAKSIEGELRTLPGARDVNANREVMITSLPIRYRHPDLAAVGLSPADAAEQVREALYGEVVDTVKQGIRQYDLVVRLAPEERATIQDVKDLLLTGRGGAIVRLSDVADIGPERSSNLIARENARRKAVVSLNVAEGSNLGDLVAEVRSRVDPLVAGTGMTVSYDGQFEAQQSAARTIGLAGVAVAIAMLMLLQISTGSIRASLLVMLNMPLALIGGIVAIYLTEGAGPIRNTLALLNIGGQYVPPVISIASMVGFITLFGIAVRNGILLINHY 963
[Close]
BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Match: A0A7Z9MH20_9BACT (Efflux RND transporter permease subunit n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9MH20_9BACT)

HSP 1 Score: 402 bits (1033), Expect = 5.280e-135
Identity = 213/276 (77.17%), Postives = 248/276 (89.86%), Query Frame = 1 
Query:    1 LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPADAAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRGGATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTGSMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVISIASLVGFITLFGIAVRNGILLINHY 828
            LR VAK IE  L ++ GARDVNANREVMITSLPI+YRHAELA+ GL+PA+AAEQVREA+YGEVVDTVNQG RQY++VVRL  + RE++ QVRDLLLRGR GAT+RL DVADIGPERSSNLITRENAQRKAV+SLNVAE SNLGDL+A+V+  VDPIVQ+A  TV YGGQFEAQQSA++TI  +G A+A+++LMLLQISTGSMRAA+LVM+NMPLALIGGIAAIY+TEGGG +SNT+AL GFG  Y+ PVISIAS+VGFITLFGI++RNGILL+NHY
Sbjct:  208 LRAVAKQIEKVLSTVQGARDVNANREVMITSLPIQYRHAELASFGLTPAEAAEQVREAMYGEVVDTVNQGTRQYNLVVRLDPSQRETIEQVRDLLLRGRNGATIRLRDVADIGPERSSNLITRENAQRKAVVSLNVAENSNLGDLIAEVKLLVDPIVQQAGYTVHYGGQFEAQQSATKTIYASGFAIAILILMLLQISTGSMRAALLVMVNMPLALIGGIAAIYITEGGGFVSNTIALFGFGGTYIAPVISIASMVGFITLFGISIRNGILLVNHY 483
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87585.20343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2N5R6_9BACT6.690e-15993.12CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A7Z9PXY6_9BACT1.500e-15491.98Efflux RND transporter permease subunit n=1 Tax=Ph... [more]
A0A812XWB5_9DINO2.780e-15497.46HelA protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A6M8VXQ9_9BACT4.870e-15391.67Efflux RND transporter permease subunit n=2 Tax=Pl... [more]
A0A7X0H3Y7_9BACT2.820e-14888.41HME family heavy-metal exporter n=1 Tax=Algisphaer... [more]
A0A2E1VUN3_9BACT1.390e-14587.68CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A2E2N5J9_9BACT5.940e-14385.00CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A518CVW3_9BACT1.570e-13681.52Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
A0A3M2CQK3_9BACT3.910e-13581.52Efflux RND transporter permease subunit n=1 Tax=Pl... [more]
A0A7Z9MH20_9BACT5.280e-13577.17Efflux RND transporter permease subunit n=1 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87585contigM-pyrifera_M_contig87585:3..830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score195.3
Seed ortholog evalue3.8e-47
Seed eggNOG ortholog349741.Amuc_1059
Preferred nameczcA
KEGG koko:K07239,ko:K07787
KEGG TC2.A.6.1,2.A.6.1.4
KEGG Pathwayko02020,map02020
Hectar predicted targeting categoryother localisation
EggNOG free text desc.AcrB/AcrD/AcrF family
EggNOG OGs2ITM5@203494,46USJ@74201,COG3696@1,COG3696@2
COG Functional cat.P
Best tax levelVerrucomicrobiae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size828
Cds size828
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816784.562151-CDS-M-pyrifera_M_contig87585:2..8301622816784.562151-CDS-M-pyrifera_M_contig87585:2..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87585 3..830 -
1692278176.6600478-CDS-M-pyrifera_M_contig87585:2..8301692278176.6600478-CDS-M-pyrifera_M_contig87585:2..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87585 3..830 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87585.20343.1prot_M-pyrifera_M_contig87585.20343.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87585 3..830 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87585.20343.1

>prot_M-pyrifera_M_contig87585.20343.1 ID=prot_M-pyrifera_M_contig87585.20343.1|Name=mRNA_M-pyrifera_M_contig87585.20343.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
LRRVAKAIEGELQSLPGARDVNANREVMITSLPIRYRHAELAAVGLSPAD
AAEQVREAIYGEVVDTVNQGVRQYDIVVRLAAADRESVRQVRDLLLRGRG
GATVRLSDVADIGPERSSNLITRENAQRKAVISLNVAEGSNLGDLVAQVQ
ERVDPIVQEARMTVSYGGQFEAQQSASRTILVAGVAVALIMLMLLQISTG
SMRAAVLVMLNMPLALIGGIAAIYMTEGGGAISNTLALIGFGSAYVPPVI
SIASLVGFITLFGIAVRNGILLINHY
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mRNA from alignment at M-pyrifera_M_contig87585:3..830-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87585.20343.1 ID=mRNA_M-pyrifera_M_contig87585.20343.1|Name=mRNA_M-pyrifera_M_contig87585.20343.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig87585:3..830- (Macrocystis pyrifera P11B4 male)
CTTCGTCGCGTCGCCAAAGCCATCGAAGGCGAGTTACAATCGCTCCCGGG
TGCCCGGGATGTGAATGCCAATCGTGAAGTCATGATTACTTCGCTCCCGA
TCCGCTACCGTCACGCGGAGTTAGCTGCAGTTGGTCTTAGCCCGGCGGAT
GCCGCCGAGCAGGTCCGTGAAGCGATCTACGGAGAGGTAGTCGACACGGT
CAATCAGGGCGTTCGCCAGTATGACATTGTTGTTCGTCTCGCTGCCGCCG
ATCGAGAATCGGTGCGGCAGGTGCGTGATCTACTACTTCGCGGACGCGGC
GGCGCGACCGTGCGTCTAAGTGATGTCGCCGACATCGGACCCGAGCGATC
GAGTAATTTAATCACCCGCGAGAACGCCCAACGGAAGGCGGTCATTTCCC
TCAATGTCGCTGAAGGGTCGAACCTCGGTGATCTCGTCGCTCAAGTGCAG
GAACGTGTCGATCCAATCGTTCAAGAAGCCAGGATGACAGTTTCGTACGG
CGGACAGTTCGAGGCGCAGCAGTCTGCATCCCGTACGATCCTCGTCGCAG
GTGTGGCCGTCGCACTCATCATGCTCATGCTCCTCCAAATCTCTACAGGC
TCGATGCGAGCCGCTGTGCTCGTCATGCTCAACATGCCGCTCGCGCTCAT
TGGCGGTATCGCAGCGATCTATATGACCGAGGGCGGCGGAGCGATCAGCA
ATACGCTTGCACTCATCGGATTTGGTAGCGCGTATGTTCCACCGGTGATC
TCGATCGCGAGTCTCGTGGGATTCATCACACTGTTTGGGATTGCGGTGCG
TAACGGCATCCTGCTTATCAATCACTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87585:3..830-

>mRNA_M-pyrifera_M_contig87585.20343.1 ID=mRNA_M-pyrifera_M_contig87585.20343.1|Name=mRNA_M-pyrifera_M_contig87585.20343.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig87585:3..830- (Macrocystis pyrifera P11B4 male)
CTTCGTCGCGTCGCCAAAGCCATCGAAGGCGAGTTACAATCGCTCCCGGG
TGCCCGGGATGTGAATGCCAATCGTGAAGTCATGATTACTTCGCTCCCGA
TCCGCTACCGTCACGCGGAGTTAGCTGCAGTTGGTCTTAGCCCGGCGGAT
GCCGCCGAGCAGGTCCGTGAAGCGATCTACGGAGAGGTAGTCGACACGGT
CAATCAGGGCGTTCGCCAGTATGACATTGTTGTTCGTCTCGCTGCCGCCG
ATCGAGAATCGGTGCGGCAGGTGCGTGATCTACTACTTCGCGGACGCGGC
GGCGCGACCGTGCGTCTAAGTGATGTCGCCGACATCGGACCCGAGCGATC
GAGTAATTTAATCACCCGCGAGAACGCCCAACGGAAGGCGGTCATTTCCC
TCAATGTCGCTGAAGGGTCGAACCTCGGTGATCTCGTCGCTCAAGTGCAG
GAACGTGTCGATCCAATCGTTCAAGAAGCCAGGATGACAGTTTCGTACGG
CGGACAGTTCGAGGCGCAGCAGTCTGCATCCCGTACGATCCTCGTCGCAG
GTGTGGCCGTCGCACTCATCATGCTCATGCTCCTCCAAATCTCTACAGGC
TCGATGCGAGCCGCTGTGCTCGTCATGCTCAACATGCCGCTCGCGCTCAT
TGGCGGTATCGCAGCGATCTATATGACCGAGGGCGGCGGAGCGATCAGCA
ATACGCTTGCACTCATCGGATTTGGTAGCGCGTATGTTCCACCGGTGATC
TCGATCGCGAGTCTCGTGGGATTCATCACACTGTTTGGGATTGCGGTGCG
TAACGGCATCCTGCTTATCAATCACTACCTTCGTCGCGTCGCCAAAGCCA
TCGAAGGCGAGTTACAATCGCTCCCGGGTGCCCGGGATGTGAATGCCAAT
CGTGAAGTCATGATTACTTCGCTCCCGATCCGCTACCGTCACGCGGAGTT
AGCTGCAGTTGGTCTTAGCCCGGCGGATGCCGCCGAGCAGGTCCGTGAAG
CGATCTACGGAGAGGTAGTCGACACGGTCAATCAGGGCGTTCGCCAGTAT
GACATTGTTGTTCGTCTCGCTGCCGCCGATCGAGAATCGGTGCGGCAGGT
GCGTGATCTACTACTTCGCGGACGCGGCGGCGCGACCGTGCGTCTAAGTG
ATGTCGCCGACATCGGACCCGAGCGATCGAGTAATTTAATCACCCGCGAG
AACGCCCAACGGAAGGCGGTCATTTCCCTCAATGTCGCTGAAGGGTCGAA
CCTCGGTGATCTCGTCGCTCAAGTGCAGGAACGTGTCGATCCAATCGTTC
AAGAAGCCAGGATGACAGTTTCGTACGGCGGACAGTTCGAGGCGCAGCAG
TCTGCATCCCGTACGATCCTCGTCGCAGGTGTGGCCGTCGCACTCATCAT
GCTCATGCTCCTCCAAATCTCTACAGGCTCGATGCGAGCCGCTGTGCTCG
TCATGCTCAACATGCCGCTCGCGCTCATTGGCGGTATCGCAGCGATCTAT
ATGACCGAGGGCGGCGGAGCGATCAGCAATACGCTTGCACTCATCGGATT
TGGTAGCGCGTATGTTCCACCGGTGATCTCGATCGCGAGTCTCGTGGGAT
TCATCACACTGTTTGGGATTGCGGTGCGTAACGGCATCCTGCTTATCAAT
CACTAC
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