mRNA_M-pyrifera_M_contig87505.20328.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87505.20328.1
Unique NamemRNA_M-pyrifera_M_contig87505.20328.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A5A8D777_CAFRO (FACT complex subunit n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D777_CAFRO)

HSP 1 Score: 202 bits (515), Expect = 9.580e-56
Identity = 113/267 (42.32%), Postives = 167/267 (62.55%), Query Frame = 1 
Query:    1 IRRSARQKAKDAENEGAMDAARKRAYRQMELLEALIQRRRKEVARKLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPG-NPNKQCVPAMVKALREHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            +RRS+R K    + +       +RA + +++ E  +  RR E+ +   G +   +E  +R+     A+PI +Y S A YP  A P R+ VDK R+ VLLP+ G LVPFHVA IR V ++EE GGR VL+ +FY PG +  K C PAMV A+ ++    ++++L++++K   N +   R+I+D+QKR+    A   + +  VKQ  L+++R  + PR+  ++MWP   G+K  VG LEAH NGLRFR ERGEI+D+IY NIRHAIFQP
Sbjct:  498 VRRSSRIKEAVGDTDQLRQEREQRALQLVKIFERSVAERRAELDKATGGSKETPRELAVRK-----AKPIRAYDSPAEYPVSAAPNRVFVDKERQCVLLPMYGQLVPFHVACIRSVTKKEE-GGRTVLRINFYGPGQSAGKTCPPAMVAAMEQNPYHAYVRVLSYQSKEGRNLSHAERLIKDIQKRMHSETAQRTERSNLVKQPKLLVNRAGKVPRLQRLNMWPHISGRKS-VGALEAHTNGLRFRAERGEILDIIYDNIRHAIFQP 757
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A812PW62_9DINO (FACT complex subunit n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PW62_9DINO)

HSP 1 Score: 202 bits (515), Expect = 1.130e-55
Identity = 113/267 (42.32%), Postives = 167/267 (62.55%), Query Frame = 1 
Query:    1 IRRSARQKAKDAENEGAMDAARKRAYRQMELLEALIQRRRKEVARKLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPG-NPNKQCVPAMVKALREHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            +RRS+R K    + +       +RA + +++ E  +  RR E+ +   G +   +E  +R+     A+PI +Y S A YP  A P R+ VDK R+ VLLP+ G LVPFHVA IR V ++EE GGR VL+ +FY PG +  K C PAMV A+ ++    ++++L++++K   N +   R+I+D+QKR+    A   + +  VKQ  L+++R  + PR+  ++MWP   G+K  VG LEAH NGLRFR ERGEI+D+IY NIRHAIFQP
Sbjct:  588 VRRSSRIKEAVGDTDQLRQEREQRALQLVKIFERSVAERRAELDKATGGSKETPRELAVRK-----AKPIRAYDSPAEYPVSAAPNRVFVDKERQCVLLPMYGQLVPFHVACIRSVTKKEE-GGRTVLRINFYGPGQSAGKTCPPAMVAAMEQNPYHAYVRVLSYQSKEGRNLSHAERLIKDIQKRMHSETAQRTERSNLVKQPKLLVNRAGKVPRLQRLNMWPHISGRKS-VGALEAHTNGLRFRAERGEILDIIYDNIRHAIFQP 847
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A7S0GEE7_9STRA (FACT complex subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEE7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.880e-39
Identity = 97/258 (37.60%), Postives = 150/258 (58.14%), Query Frame = 1 
Query:   40 NEGAMDA---ARKRAYRQMELLEALIQRRRKEVARKLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNPNKQCVPA-MVKALREHDAMP-FIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            N GA D    A +R  RQ+EL+    + R +E+AR     +  DKE+++       A  +++Y  A  YP   +P ++ VD   E V+LPI G  +PFH++TI++V   + +   + L+ +FYT G+   +  P  M K + +H     FI+ LTF++    N    +R I +++KR+R R    ++EA  VKQ  LV  +  R PR+S++++ P F G+K   G++EAH NGLRF   RGEIVDV+Y NI+HAI+QP
Sbjct:  180 NTGAQDTQEGASERERRQVELMSRKNEERIRELARANAKNKGADKESDL-------AEELITYNRARDYPDYVMPNQVKVDMKNECVILPIFGNPIPFHISTIKNVVLPDPDLATY-LRINFYTAGSTIGKDTPVNMGKLILKHAPYASFIRELTFRSLDSHNLTQAFRQISELRKRVRQREIREQEEANLVKQEKLVRTKNERVPRLSDLTLRPVFSGRK-TQGNIEAHTNGLRFISTRGEIVDVMYSNIKHAIYQP 428
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BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: W7TT12_9STRA (FACT complex subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT12_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.400e-38
Identity = 94/240 (39.17%), Postives = 144/240 (60.00%), Query Frame = 1 
Query:   94 LEALIQRRRKEVARKL-KGG--EALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNPNKQCVPA-MVKALREHDAMP-FIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            ++AL+ R+ KE A K  K G  EA+++E E+ E        I +Y S   YPRD    ++ VD  RE VLLPI G  VPFH+ATI++V + E +   + L+ +FY+PG    +  P  M K ++ H     F+K + F++    N    YR+I++++KR R R   A++EA  V+Q  +V+ +  R  ++ +V M P   G+K  +G LEAH NGLRFR ++ E+VD++Y N+R+AIFQP
Sbjct:  551 MKALLLRKMKERAEKAGKSGRKEAVEEEGEVEE--------IQAYRSTEQYPRDMRANQVFVDMEREAVLLPIHGMHVPFHIATIKNVVQPEPDAAAY-LRINFYSPGQTLGKDAPGIMSKLVQAHGQKAGFVKEMLFRSLEHRNLNNAYRLIQELRKRARQREKDAKEEADLVEQEKIVLLKNQRVHKLQDVVMRPHISGRK-TMGTLEAHANGLRFRSKKQEVVDIMYANVRNAIFQP 780
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BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A7R9W7Y6_9STRA (FACT complex subunit (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7Y6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.780e-38
Identity = 94/248 (37.90%), Postives = 138/248 (55.65%), Query Frame = 1 
Query:   70 RAYRQMELLEALIQRRRKEVAR---KLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNPNKQCVPAMVKALREHDA--MPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            R  RQ+EL+    + R +E+AR   K KG E           E E A  + +Y     YP + LP ++ VD A + V+LPI G  VPFH++TI++    E +   + L+ +FYT G    +  P     L +  A    FI+ +TF++    N    YR I++++KR R +     +EA  VKQ  LV  +  R PR+S+++M P F G+K   G+LEAH NG+RF   RGE+VD++Y NI+HAIFQP
Sbjct:    1 RQRRQIELMSRRNEERLRELARANLKNKGKEG----------EAEKAEELETYKRTKDYPDNVLPNQVKVDMANKCVILPICGNPVPFHISTIKNCVLPEADAATY-LRINFYTAGMALGKDAPKNTSMLVQRYAPYASFIREMTFRSLESHNLTQAYRQIQELRKRERQKEIRELEEANLVKQEKLVRTKNERVPRLSDLTMRPVFAGRK-TQGNLEAHSNGMRFISTRGEVVDIMYANIKHAIFQP 236
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: F0WM38_9STRA (FACT complex subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM38_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.350e-37
Identity = 78/200 (39.00%), Postives = 122/200 (61.00%), Query Frame = 1 
Query:  202 RPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNP-NKQCVPAMVKALREHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            + I++Y S A YP D    ++MVD   E V+LP+ G  VPFH++TI++V + EE+   + L+ +FY PG   ++  +PAM   + +     FIK L F++    N   Q+R+I+++QKR++ R    ++E+  V Q  LV+ R  R PR+ ++S  P   G+K   G LEAH NGLRF   + + +D++Y NI+HAIFQP
Sbjct: 1578 KTIIAYPSPAHYPSDLRDRQVMVDMRAEAVILPVNGVPVPFHISTIKNVSKSEEDKATY-LRINFYVPGTSMSRDLLPAMQNIITKFPTKMFIKELGFRSMDAHNLNNQFRLIKELQKRVKQREQQEQEESDLVTQEDLVLSRDRRVPRLIDLSARPHVTGRK-THGTLEAHTNGLRFTTNKNQKLDILYTNIKHAIFQP 1775
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A024G600_9STRA (FACT complex subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G600_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.230e-37
Identity = 79/200 (39.50%), Postives = 121/200 (60.50%), Query Frame = 1 
Query:  202 RPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNP-NKQCVPAMVKALREHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            + I++Y S A YP D    ++MVD   E V+LPI G  VPFH++TI++V + EE+   + L+ +FY PG   ++  +PAM   +       FIK L F++    N   Q+R+I+++QKR++ R    ++E+  V Q  LV+ R  R PR+ ++S  P   G+K   G LEAH NGLRF   + + +D++Y NI+HAIFQP
Sbjct:  576 KTIMAYPSPAHYPSDLKDRQVMVDMRAEAVILPINGVPVPFHISTIKNVSKSEEDKATY-LRINFYVPGTSLSRDLLPAMQNIITNFPTKMFIKELGFRSMDAHNLNNQFRLIKELQKRVKQREQQEQEESDLVTQEDLVLSRDRRVPRLIDLSARPHVTGRK-THGTLEAHTNGLRFTTNKNQKLDILYANIKHAIFQP 773
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A7S2A8Z5_TRICV (FACT complex subunit n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z5_TRICV)

HSP 1 Score: 149 bits (375), Expect = 2.540e-37
Identity = 93/267 (34.83%), Postives = 147/267 (55.06%), Query Frame = 1 
Query:    4 RRSARQKAKDAENEGAMDAARKRAYRQMELLEALIQRRRKEVARKLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNPNKQCVPAMVKALREHDA--MPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            R SAR       N+   + A +R  RQ++L+    + R +E+AR  +         + ++ E E A  + +Y     YP + LP ++ VD A + V+LPI G  VP+H++ I++V   E +G    L+ +FYT G    +  P     L +  A    FI+ +TF++    N    YR I++++KR R +    ++EA  VKQ  L+  +  R PR+S+++M P F  +K   G+LEAH NG+RF   RGE+VDV+Y NI+HAI+QP
Sbjct:   51 RASARLAQSRVSNQEVAEGAAERQRRQIQLMARRNEERLRELARSNRN--------KGKDEEAERAEELETYKRTKDYPDNVLPNQVKVDMANKCVILPICGNPVPYHISMIKNVVLPEADGTTTYLRINFYTAGMALGKDAPRNTAKLVQRYAPYASFIREMTFRSLEPHNLTQAYRQIQELRKRERQKELREQEEANLVKQEKLIRTKNERVPRLSDLTMRPVFASRK-TQGNLEAHTNGMRFISTRGEVVDVMYGNIKHAIYQP 308
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: A0A7S2M437_9STRA (FACT complex subunit (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M437_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.740e-37
Identity = 97/269 (36.06%), Postives = 154/269 (57.25%), Query Frame = 1 
Query:    4 RRSARQKAKDAENEGAMDAARKRAYRQMELLEALIQRRRKEVAR--KLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNP-NKQCVPAMVKALREHDAMP-FIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            R+S+R  A  A     ++   +R  +Q+EL+    + R +E+AR  + KGG+   K+ E    E+EA      Y S    P + LP ++ VD A + V+LPI G  VPFH++TI++V   + +   + L+ +FYT G    K C     K ++++     FI+ +TF++    +    +R I +++KR R +    ++EA  VKQ  LV  +  R PR+S+++M P F G+K   G+LE+H NGLRF   RGEIVD++Y N++HAIFQP
Sbjct:  146 RKSSRLAANAASGAADVEGVAERERKQIELMARKNEERLRELARSSRKKGGDEKSKKGE----EIEA------YKSTKTLPDNVLPNQVKVDMANQCVILPICGNPVPFHISTIKNVVLPDPDNAAY-LRINFYTGGMAVGKDCPENTAKLVQKYAPYATFIREMTFRSLDSHSLTTAFRQISELRKRARMKEIEEKEEANLVKQDKLVRTKNERVPRLSDLTMRPVFAGRK-TQGNLESHTNGLRFISTRGEIVDIMYANVKHAIFQP 402
[Close]
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Match: W4G9S0_9STRA (FACT complex subunit n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9S0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.400e-36
Identity = 89/260 (34.23%), Postives = 151/260 (58.08%), Query Frame = 1 
Query:   28 KDAENEGAMDAARKRAYRQMELLEALIQRRRKEVARKLKGGEALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLPIRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPG---NPNKQCVPAMVKALREHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTVKQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGEIVDVIYKNIRHAIFQP 798
            K  ++EG      +R   Q EL++     +R+E  R+L+     ++ ++  + + +    IV+Y  ++ YP +  P ++ VD   E V++PI G  VPFH++TI++V + EE+   + L+ +F+ PG      K   PAM  A+ +  ++ FIK L F++    N   Q+R+I+++QKR++ R    ++E+  V Q  L++ R  R PR+S++S  P F G+K   G LEAHVNG RF   + + +D++Y NI+HAIFQP
Sbjct:  489 KQRQSEGKQTDQERRERHQAELMKE----KREEAMRRLE-----EQSSDAVQGKRQDRNAIVAYNHSSRYP-ELKPRQVAVDMRAEAVIVPINGIPVPFHISTIKNVSKSEEDKATY-LRINFHCPGVGGTLGKDASPAMQAAVAKFPSLMFIKELGFRSSDAHNLNNQFRLIKELQKRVKQREQQEQEESDLVVQEDLIMQRDRRVPRLSDLSARPTFSGRK-TQGTLEAHVNGFRFTTNKNQKLDILYANIKHAIFQP 736
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87505.20328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D777_CAFRO9.580e-5642.32FACT complex subunit n=3 Tax=Cafeteria roenbergens... [more]
A0A812PW62_9DINO1.130e-5542.32FACT complex subunit n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S0GEE7_9STRA2.880e-3937.60FACT complex subunit n=1 Tax=Proboscia inermis Tax... [more]
W7TT12_9STRA1.400e-3839.17FACT complex subunit n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7R9W7Y6_9STRA3.780e-3837.90FACT complex subunit (Fragment) n=1 Tax=Pseudictyo... [more]
F0WM38_9STRA1.350e-3739.00FACT complex subunit n=1 Tax=Albugo laibachii Nc14... [more]
A0A024G600_9STRA2.230e-3739.50FACT complex subunit n=1 Tax=Albugo candida TaxID=... [more]
A0A7S2A8Z5_TRICV2.540e-3734.83FACT complex subunit n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2M437_9STRA3.740e-3736.06FACT complex subunit (Fragment) n=1 Tax=Skeletonem... [more]
W4G9S0_9STRA1.400e-3634.23FACT complex subunit n=8 Tax=Aphanomyces astaci Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87505contigM-pyrifera_M_contig87505:33..830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.2
Seed ortholog evalue1.4e-33
Seed eggNOG ortholog653948.CCA22366
Preferred nameDGCR14
KEGG rclassRC00219,RC00332
KEGG koko:K00560,ko:K08869,ko:K13118,ko:K20093
KEGG ReactionR02101
KEGG Pathwayko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000785,GO:0000790,GO:0000791,GO:0001672,GO:0003006,GO:0003674,GO:0003682,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005694,GO:0005719,GO:0005730,GO:0005819,GO:0005856,GO:0006139,GO:0006325,GO:0006333,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007399,GO:0008023,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015630,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0016071,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022414,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035101,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045292,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071013,GO:0071014,GO:0071704,GO:0071824,GO:0071840,GO:0072686,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902275,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.RNA splicing
EggNOG OGsCOG5406@1,KOG1189@2759,KOG2627@1,KOG2627@2759,KOG2641@1,KOG2641@2759
EC2.1.1.45,3.6.4.12
COG Functional cat.BKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko03041
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816783.8329792-CDS-M-pyrifera_M_contig87505:32..8301622816783.8329792-CDS-M-pyrifera_M_contig87505:32..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87505 33..830 +
1692278176.2152748-CDS-M-pyrifera_M_contig87505:32..8301692278176.2152748-CDS-M-pyrifera_M_contig87505:32..830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87505 33..830 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87505.20328.1prot_M-pyrifera_M_contig87505.20328.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87505 33..830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87505.20328.1

>prot_M-pyrifera_M_contig87505.20328.1 ID=prot_M-pyrifera_M_contig87505.20328.1|Name=mRNA_M-pyrifera_M_contig87505.20328.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
IRRSARQKAKDAENEGAMDAARKRAYRQMELLEALIQRRRKEVARKLKGG
EALDKEAEIREREMEAARPIVSYASAAMYPRDALPTRIMVDKARETVLLP
IRGTLVPFHVATIRDVQREEEEGGRHVLKFHFYTPGNPNKQCVPAMVKAL
REHDAMPFIKMLTFKAKTDENFAVQYRIIRDMQKRLRDRVAHARDEATTV
KQAPLVIDRGARNPRISNVSMWPAFGGKKKCVGDLEAHVNGLRFRDERGE
IVDVIYKNIRHAIFQP
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mRNA from alignment at M-pyrifera_M_contig87505:33..830+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87505.20328.1 ID=mRNA_M-pyrifera_M_contig87505.20328.1|Name=mRNA_M-pyrifera_M_contig87505.20328.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig87505:33..830+ (Macrocystis pyrifera P11B4 male)
ATTCGACGATCTGCGAGGCAAAAAGCCAAGGACGCGGAGAATGAGGGCGC
GATGGATGCGGCGAGGAAGAGGGCGTACCGGCAGATGGAGCTGCTGGAGG
CTTTGATCCAGCGAAGACGCAAAGAAGTCGCTCGGAAACTCAAGGGCGGG
GAGGCGCTGGACAAGGAGGCCGAAATTCGAGAACGGGAAATGGAGGCCGC
CCGTCCAATCGTGTCCTATGCCTCAGCAGCCATGTACCCTCGCGATGCTC
TTCCCACGCGCATCATGGTGGACAAGGCTCGTGAAACAGTGCTGCTTCCC
ATCCGAGGCACTTTGGTTCCGTTCCACGTGGCCACAATTCGAGACGTGCA
GCGGGAGGAGGAGGAAGGCGGGCGGCATGTGCTCAAGTTCCACTTCTACA
CGCCCGGAAACCCAAACAAGCAGTGTGTCCCAGCCATGGTCAAGGCTTTG
CGGGAGCACGACGCGATGCCCTTCATCAAGATGCTCACCTTCAAGGCCAA
GACGGACGAGAACTTTGCAGTGCAGTACCGCATCATCCGGGACATGCAGA
AGCGGTTGCGTGATCGAGTGGCTCATGCGAGAGACGAAGCCACCACAGTC
AAGCAGGCGCCGCTGGTGATCGACCGAGGCGCTCGCAATCCGAGAATCAG
CAACGTGAGCATGTGGCCCGCGTTTGGAGGCAAGAAGAAGTGCGTGGGTG
ACCTGGAGGCGCACGTGAACGGCCTTCGGTTCCGCGATGAGCGCGGGGAG
ATTGTGGACGTGATCTACAAGAACATCCGACACGCCATCTTCCAGCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87505:33..830+

>mRNA_M-pyrifera_M_contig87505.20328.1 ID=mRNA_M-pyrifera_M_contig87505.20328.1|Name=mRNA_M-pyrifera_M_contig87505.20328.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig87505:33..830+ (Macrocystis pyrifera P11B4 male)
ATTCGACGATCTGCGAGGCAAAAAGCCAAGGACGCGGAGAATGAGGGCGC
GATGGATGCGGCGAGGAAGAGGGCGTACCGGCAGATGGAGCTGCTGGAGG
CTTTGATCCAGCGAAGACGCAAAGAAGTCGCTCGGAAACTCAAGGGCGGG
GAGGCGCTGGACAAGGAGGCCGAAATTCGAGAACGGGAAATGGAGGCCGC
CCGTCCAATCGTGTCCTATGCCTCAGCAGCCATGTACCCTCGCGATGCTC
TTCCCACGCGCATCATGGTGGACAAGGCTCGTGAAACAGTGCTGCTTCCC
ATCCGAGGCACTTTGGTTCCGTTCCACGTGGCCACAATTCGAGACGTGCA
GCGGGAGGAGGAGGAAGGCGGGCGGCATGTGCTCAAGTTCCACTTCTACA
CGCCCGGAAACCCAAACAAGCAGTGTGTCCCAGCCATGGTCAAGGCTTTG
CGGGAGCACGACGCGATGCCCTTCATCAAGATGCTCACCTTCAAGGCCAA
GACGGACGAGAACTTTGCAGTGCAGTACCGCATCATCCGGGACATGCAGA
AGCGGTTGCGTGATCGAGTGGCTCATGCGAGAGACGAAGCCACCACAGTC
AAGCAGGCGCCGCTGGTGATCGACCGAGGCGCTCGCAATCCGAGAATCAG
CAACGTGAGCATGTGGCCCGCGTTTGGAGGCAAGAAGAAGTGCGTGGGTG
ACCTGGAGGCGCACGTGAACGGCCTTCGGTTCCGCGATGAGCGCGGGGAG
ATTGTGGACGTGATCTACAAGAACATCCGACACGCCATCTTCCAGCCCAT
TCGACGATCTGCGAGGCAAAAAGCCAAGGACGCGGAGAATGAGGGCGCGA
TGGATGCGGCGAGGAAGAGGGCGTACCGGCAGATGGAGCTGCTGGAGGCT
TTGATCCAGCGAAGACGCAAAGAAGTCGCTCGGAAACTCAAGGGCGGGGA
GGCGCTGGACAAGGAGGCCGAAATTCGAGAACGGGAAATGGAGGCCGCCC
GTCCAATCGTGTCCTATGCCTCAGCAGCCATGTACCCTCGCGATGCTCTT
CCCACGCGCATCATGGTGGACAAGGCTCGTGAAACAGTGCTGCTTCCCAT
CCGAGGCACTTTGGTTCCGTTCCACGTGGCCACAATTCGAGACGTGCAGC
GGGAGGAGGAGGAAGGCGGGCGGCATGTGCTCAAGTTCCACTTCTACACG
CCCGGAAACCCAAACAAGCAGTGTGTCCCAGCCATGGTCAAGGCTTTGCG
GGAGCACGACGCGATGCCCTTCATCAAGATGCTCACCTTCAAGGCCAAGA
CGGACGAGAACTTTGCAGTGCAGTACCGCATCATCCGGGACATGCAGAAG
CGGTTGCGTGATCGAGTGGCTCATGCGAGAGACGAAGCCACCACAGTCAA
GCAGGCGCCGCTGGTGATCGACCGAGGCGCTCGCAATCCGAGAATCAGCA
ACGTGAGCATGTGGCCCGCGTTTGGAGGCAAGAAGAAGTGCGTGGGTGAC
CTGGAGGCGCACGTGAACGGCCTTCGGTTCCGCGATGAGCGCGGGGAGAT
TGTGGACGTGATCTACAAGAACATCCGACACGCCATCTTCCAGCCC
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