mRNA_M-pyrifera_M_contig87497.20324.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87497.20324.1
Unique NamemRNA_M-pyrifera_M_contig87497.20324.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: A0A2P6NFF2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NFF2_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 1.660e-40
Identity = 96/280 (34.29%), Postives = 145/280 (51.79%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFPNA---------------EKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPE-----YDVEKILGHRGDAGNREYKIQWEGY--KRPTWEPERNIVASDCVKEYWTRV 774
            SDN + F++E++  L++ +GF HR I  Y+   NG  E +VQ   N+++K   G   +W+ +VP+ Q +LN +I +RHGS PFSL+F R  NGF DF  +               E++   V+ AI EK  K     +D S K         +   G  V+   + +  K+  ++EGPF V    NK G Y +Q  DG  L   +  + LKL+      S DP+     Y +E+I+ HRG A N EY ++W+GY  K  TWEP  +  ++  +  YWTR+
Sbjct:   67 SDNGTEFVNELMKLLKETAGFDHRLITPYHAAANGTAERWVQNALNVIRKMIDGARHDWDLYVPSTQYALNVKIAARHGSTPFSLMFNRSPNGFNDFTGSLGLHPFNGEAYAARIEQFANIVFPAIYEKVQK----YIDASTKD----RHLTSFPDGSFVMTVNKSRTNKLEARYEGPFKVLR-RNKGGAYILQDTDGLTLPRNYTTEELKLI------SHDPDKHGKSYVIERIIQHRGTASNYEYLVKWKGYTAKYNTWEPTDSFDSTASIDAYWTRL 331          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1CW86_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CW86_RHIO9)

HSP 1 Score: 149 bits (376), Expect = 1.340e-37
Identity = 92/277 (33.21%), Postives = 140/277 (50.54%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGYKRP--TWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ   N +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L++GR MN FEDF                  N ++  E V+ AI E++    + I +   +K    +K  T+     V+  +  K  K+   +EGP+ VK    + G Y ++   G+LL   +P   LKL+ +    S D  Y VE IL H+   G   YK +W+GY +   TWEP  N      + EYW RV
Sbjct:  298 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQTAVNAIKKQIEGAKADWDLYVPSTQLYLNGKHNERTKTPPFTLMYGRNMNDFEDFSKEKNKATKEEINKQLLLNIKRMTEIVFPAIYERT----KIITNNQKEKFDASHKLITIPENSYVMVKVNIKTNKLDPNYEGPYKVKRI-TQGGSYVLEDEMGELLSKNYPPSALKLISQDEVISTDKFYQVEAILAHKKLKGKYLYKCRWKGYDKSDDTWEPASNFTDPKFITEYWQRV 569          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1CFN5_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CFN5_RHIO9)

HSP 1 Score: 143 bits (361), Expect = 5.750e-37
Identity = 87/277 (31.41%), Postives = 137/277 (49.46%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGY--KRPTWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ     +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L+FGR  N FEDF                  N +K  E V+ AI E++    + I ++  +K    +K  ++     V+  +  K  K+   +EGP+ VK    + G Y ++   G LL   +P   LK++ +    S +  Y VE IL H+   G   YK +W+GY     TWEP  +      + EYW R+
Sbjct:   41 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQSAVKAIKKQVEGAKADWDLYVPSTQLYLNSKYNERTKTPPFTLMFGRNPNDFEDFSQEKNEATKEELNTELLKNIKKMTEIVFPAIYERT----KIITNKQKEKFDASHKLVSIPENSYVMATVNYKTNKLDAPYEGPYKVKRI-TQGGSYVLEDEKGDLLPKNYPPSALKMISQDEVISSNKFYQVEAILAHKKVKGKYIYKCRWKGYDESEDTWEPASHFADLKFITEYWQRI 312          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1BWQ3_RHIO9 (Uncharacterized protein n=3 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BWQ3_RHIO9)

HSP 1 Score: 147 bits (372), Expect = 1.230e-36
Identity = 92/277 (33.21%), Postives = 139/277 (50.18%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGYKRP--TWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ   N +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L++GR MN FEDF                  N ++  E V+ AI E++    + I +   +K    +K  T+     V+  +  K  K+   +EGP+ VK    + G Y ++   G+LL    P   LKL+ +    S D  Y VE IL H+   G   YK +W+GY +   TWEP  N      + EYW RV
Sbjct:  702 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQTAVNAIKKQIEGAKADWDLYVPSTQLYLNGKHNERTKTPPFTLMYGRNMNDFEDFSKEKNKATKEEINKQLLLNIKRMTEIVFPAIYERT----KIITNNQKEKFDASHKLITIPENSYVMVKVNIKTNKLDPNYEGPYKVKRI-TQGGSYVLEDEMGELLSKNHPPSALKLISQDEVISTDKFYQVEAILAHKKLKGKYLYKCRWKGYDKSDDTWEPASNFTDPKFITEYWQRV 973          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1CNR1_RHIO9 (Uncharacterized protein n=2 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CNR1_RHIO9)

HSP 1 Score: 147 bits (372), Expect = 1.310e-36
Identity = 91/277 (32.85%), Postives = 140/277 (50.54%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGYKRP--TWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ   N +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L++GR MN FEDF                  N ++  E V+ AI E++    + I +   +K    +K  T+     V+  +  K  K+   +EGP+ VK    + G Y ++   G+LL   +P   LKL+ +    S D  Y V+ IL H+   G   YK +W+GY +   TWEP  N      + EYW RV
Sbjct: 1140 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQTAVNAIKKQIEGAKADWDLYVPSTQLYLNGKHNERTKTPPFTLMYGRNMNDFEDFSKEKNKATKEEINKQLLFNIKRMTEIVFPAIYERT----KIITNNQKEKFDASHKLITIPENSYVMVKVNIKTNKLDPNYEGPYKVKRI-TQGGSYVLEDEMGELLSKNYPPSALKLISQDEVISTDKFYQVKAILAHKKLKGKYLYKCRWKGYDKSDDTWEPASNFTDPKFITEYWQRV 1411          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1BPW9_RHIO9 (Uncharacterized protein n=6 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BPW9_RHIO9)

HSP 1 Score: 147 bits (370), Expect = 2.440e-36
Identity = 91/277 (32.85%), Postives = 139/277 (50.18%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGYKRP--TWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ   N +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L++ R MN FEDF                  N ++  E V+ AI E++    + I +   +K    +K  T+     V+  +  K  K+   +EGP+ VK    + G Y ++   G+LL   +P   LKL+ +    S D  Y VE IL H+   G   YK +W+GY +   TWEP  N      + EYW RV
Sbjct: 1224 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQTAVNAIKKQIEGAKADWDLYVPSTQLYLNGKHNERTKTPPFTLMYARNMNDFEDFSKEKNKATKEEINKQLLLNIKRMTEIVFPAIYERT----KIITNNQKEKFDASHKLITIPENSYVMVKVNIKTNKLDPNYEGPYKVKRI-TQGGSYVLEDEMGELLSKNYPPSALKLISQDEVISTDKFYQVEAILAHKKLKGKYLYKCRWKGYDKSDDTWEPASNFTDPKFITEYWQRV 1495          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: A0A2P6NFD0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NFD0_9EUKA)

HSP 1 Score: 145 bits (367), Expect = 2.570e-36
Identity = 94/280 (33.57%), Postives = 144/280 (51.43%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFPNA---------------EKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPE-----YDVEKILGHRGDAGNREYKIQWEGY--KRPTWEPERNIVASDCVKEYWTRV 774
            SDN + F++E++  L++ +GF HR I  Y+   NG  E +VQ   N+++K   G   +W+ +VP+ Q +LN +I +RHGS PFSL+F R  NGF DF  +               E++   V+ AI+EK  K     +D S K         +   G  V+   + +  K+  ++EGPF V    NK G Y +Q  D   L   +  + LKL+      S DP+     Y +E+I+ HRG A N EY ++W+GY  K  T EP  +  ++  +  YWTR+
Sbjct:   97 SDNGTEFVNELMKLLKETAGFDHRLITPYHAAANGTAERWVQNALNVIRKMIDGARHDWDLYVPSTQYALNVKIAARHGSTPFSLMFNRSPNGFNDFTGSLGLHPFDGEAYAARIEQFANIVFPAINEKVQK----YIDASTKD----RHLTSFPDGSFVMTVNKSRTNKLEARYEGPFKVLR-RNKGGAYILQDTDSLTLSRNYTTEELKLI------SHDPDEHGKSYVIERIIQHRGTAPNYEYLVKWKGYTAKYNTLEPTDSFDSTASIDAYWTRL 361          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1C489_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C489_RHIO9)

HSP 1 Score: 145 bits (366), Expect = 5.660e-36
Identity = 88/277 (31.77%), Postives = 138/277 (49.82%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGY--KRPTWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ     +KK  +G   +W+ +VP+IQ+ LN +   R  + PF+L+FGR  N FEDF                  N +K  E V+ AI E++    + I ++  +K    +K  ++     V+  +  K  K+   +EGP+ VK    + G Y ++   G LL   +P   LK++ +    S +  Y VE IL H+   G   YK +W+GY     TWEP  +      + EYW R+
Sbjct:  360 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQSAVKAIKKQVEGAKADWDLYVPSIQLYLNSKYNERTKTPPFTLMFGRNPNDFEDFSQEKNEATKEELNTELLKNIKKMTEIVFPAIYERT----KIITNKQKEKFDASHKLVSIPENSYVMVTVNYKTNKLDAPYEGPYKVKRI-TQGGSYVLEDEKGDLLPKNYPPSALKMISQDEVISSNKFYQVEAILAHKKAKGKYIYKCRWKGYDESEDTWEPASHFADLKFITEYWQRI 631          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: A0A068SI43_9FUNG (Uncharacterized protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068SI43_9FUNG)

HSP 1 Score: 144 bits (363), Expect = 1.240e-35
Identity = 91/284 (32.04%), Postives = 154/284 (54.23%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFPN---------------AEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMV-VKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLV--EKVIE-----ESDDPEYDVEKILGHRGDA-GNREYKIQWEGYKRP--TWEPERNIVASDCVKEYWTRV 774
            SDN + F++ ++ +L++ +GF HR    Y+PR NG+ E +VQ T N+++K   G  ++W+ +V  IQ++LN+++ S HGS PF+L+F R MNGF D+ N                +   +TV+ AISE+++    A+      K   KY+      G  V VK + R R K+  ++EGP+ V   + + G Y ++   G L    F    LKLV  +++++     E D   Y ++ I+ H+  A G  +Y+++WEGY     TWEP ++  +   + EYW ++
Sbjct:  356 SDNGTEFVNVLMRKLKESAGFDHRLATPYHPRANGLAERFVQTTTNVIRKNVDGATRDWDLYVKPIQLALNNKVASCHGSTPFALMFNRAMNGFRDYSNDDIPRPLQEDELMDRIDMMSKTVFPAISERAT----ALAQLKKGKHDAKYRIIKFPPGSKVMVKDMLRSR-KLDPRYEGPYTVVR-ETQGGSYVLRDEQGLLASRNFAPSQLKLVSQDELLDASEAYERDGEYYTIQAIVDHKELAPGKYQYRVRWEGYTEADDTWEPPQSFNSPAPISEYWNKI 633          
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Match: I1BPX1_RHIO9 (Uncharacterized protein n=10 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BPX1_RHIO9)

HSP 1 Score: 143 bits (360), Expect = 4.890e-35
Identity = 87/277 (31.41%), Postives = 137/277 (49.46%), Query Frame = 1
Query:    1 SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKKWAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFP-----------------NAEKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQRKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEKVIEESDDPEYDVEKILGHRGDAGNREYKIQWEGY--KRPTWEPERNIVASDCVKEYWTRV 774
            SDN   F++E++  L + +G+ HR I  Y+PR NGV E +VQ     +KK  +G   +W+ +VP+ Q+ LN +   R  + PF+L+FGR  N FEDF                  N +K  E V+ AI E++    + I ++  +K    +K  ++     V+  +  K  K+   +EGP+ VK    + G Y ++   G LL   +P   LK++ +    S +  Y VE IL H+   G   YK +W+GY     TWEP  +      + EYW R+
Sbjct:  700 SDNGGEFVNELMQLLAENAGYDHRLISSYHPRANGVSERWVQSAVKAIKKQVEGAKADWDLYVPSTQLYLNSKYNERTKTPPFTLMFGRNPNDFEDFSQEKNEATKEELNTELLKNIKKMTEIVFPAIYERT----KIITNKQKEKFDASHKLVSIPENSYVMVTVNYKTNKLDAPYEGPYKVKRI-TQGGSYVLEDEKGDLLPKNYPPSALKMISQDEVISSNKFYQVEAILAHKKVKGKYIYKCRWKGYDESEDTWEPASHFADLKFITEYWQRI 971          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87497.20324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6NFF2_9EUKA1.660e-4034.29Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
I1CW86_RHIO91.340e-3733.21Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
I1CFN5_RHIO95.750e-3731.41Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
I1BWQ3_RHIO91.230e-3633.21Uncharacterized protein n=3 Tax=Rhizopus delemar (... [more]
I1CNR1_RHIO91.310e-3632.85Uncharacterized protein n=2 Tax=Rhizopus delemar (... [more]
I1BPW9_RHIO92.440e-3632.85Uncharacterized protein n=6 Tax=Rhizopus delemar (... [more]
A0A2P6NFD0_9EUKA2.570e-3633.57Uncharacterized protein (Fragment) n=1 Tax=Planopr... [more]
I1C489_RHIO95.660e-3631.77Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A068SI43_9FUNG1.240e-3532.04Uncharacterized protein n=1 Tax=Lichtheimia corymb... [more]
I1BPX1_RHIO94.890e-3531.41Uncharacterized protein n=10 Tax=Rhizopus delemar ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87497contigM-pyrifera_M_contig87497:4..831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score155.6
Seed ortholog evalue3.2e-35
Seed eggNOG ortholog936053.I1CW57
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Integrase core domain
EggNOG OGs1GXN4@112252,3AFVE@33154,3PCPI@4751,COG2801@1,KOG0017@2759
COG Functional cat.B
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size786
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816783.66826-CDS-M-pyrifera_M_contig87497:3..4971622816783.66826-CDS-M-pyrifera_M_contig87497:3..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87497 4..497 -
1692278176.1092002-CDS-M-pyrifera_M_contig87497:3..4971692278176.1092002-CDS-M-pyrifera_M_contig87497:3..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87497 4..497 -
1622816783.6788962-CDS-M-pyrifera_M_contig87497:539..8311622816783.6788962-CDS-M-pyrifera_M_contig87497:539..831Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87497 540..831 -
1692278176.12713-CDS-M-pyrifera_M_contig87497:539..8311692278176.12713-CDS-M-pyrifera_M_contig87497:539..831Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87497 540..831 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87497.20324.1prot_M-pyrifera_M_contig87497.20324.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87497 4..831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87497.20324.1

>prot_M-pyrifera_M_contig87497.20324.1 ID=prot_M-pyrifera_M_contig87497.20324.1|Name=mRNA_M-pyrifera_M_contig87497.20324.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
SDNESSFISEVLVELRKLSGFQHRRIMKYYPRQNGVVEVYVQETKNLLKK
WAKGDMQNWEQFVPAIQMSLNDRIISRHGSRPFSLLFGRRMNGFEDFPNA
EKWGETVWSAISEKSSKTGQAIVDRSNKKGGGKYKRETLNVGDMVVKAIQ
RKRGKMGEKWEGPFVVKEFDNKLGGYKIQTMDGKLLKDYFPIKFLKLVEK
VIEESDDPEYDVEKILGHRGDAGNREYKIQWEGYKRPTWEPERNIVASDC
VKEYWTRVNKEK
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mRNA from alignment at M-pyrifera_M_contig87497:4..831-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87497.20324.1 ID=mRNA_M-pyrifera_M_contig87497.20324.1|Name=mRNA_M-pyrifera_M_contig87497.20324.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig87497:4..831- (Macrocystis pyrifera P11B4 male)
TCGGACAACGAGTCTTCGTTTATCTCAGAAGTGTTGGTCGAGTTGAGGAA ACTGTCGGGTTTCCAACATCGTCGCATCATGAAGTATTATCCGAGACAGA ATGGAGTCGTGGAGGTTTATGTTCAAGAGACGAAGAATTTATTGAAAAAG TGGGCGAAAGGGGATATGCAGAATTGGGAACAATTCGTTCCTGCGATCCA AATGAGCCTCAACGATCGAATTATCTCTCGTCATGGCAGCAGGCCTTTTT CTCTTCTTTTTGGTAGGAGGATGAATGGTTTTGAAGATTTTCGTGAAACC TAGATGTCTTCAAAGTCTCCCGAGGAGTTGCTAGCGAATGCGGAAAAATG GGGTGAGACCGTTTGGTCTGCCATCTCTGAAAAATCGTCGAAAACCGGTC AGGCAATCGTCGACCGTAGCAACAAGAAGGGGGGTGGGAAATATAAGAGG GAAACTCTTAATGTTGGGGACATGGTTGTGAAAGCCATTCAGAGGAAGAG GGGGAAGATGGGTGAAAAATGGGAAGGCCCATTTGTTGTGAAGGAGTTTG ACAACAAGTTGGGTGGATACAAAATCCAGACGATGGACGGGAAATTGTTG AAAGACTATTTTCCCATCAAGTTTCTGAAACTGGTTGAGAAGGTGATCGA GGAGAGCGATGATCCGGAATATGATGTCGAAAAGATTCTGGGCCATCGTG GCGACGCTGGGAATCGAGAATACAAGATTCAATGGGAGGGCTACAAGAGG CCGACCTGGGAACCAGAGAGGAATATCGTTGCCTCCGATTGCGTGAAAGA ATACTGGACGCGAGTCAACAAGGAGAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87497:4..831-

>mRNA_M-pyrifera_M_contig87497.20324.1 ID=mRNA_M-pyrifera_M_contig87497.20324.1|Name=mRNA_M-pyrifera_M_contig87497.20324.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig87497:4..831- (Macrocystis pyrifera P11B4 male)
TCGGACAACGAGTCTTCGTTTATCTCAGAAGTGTTGGTCGAGTTGAGGAA
ACTGTCGGGTTTCCAACATCGTCGCATCATGAAGTATTATCCGAGACAGA
ATGGAGTCGTGGAGGTTTATGTTCAAGAGACGAAGAATTTATTGAAAAAG
TGGGCGAAAGGGGATATGCAGAATTGGGAACAATTCGTTCCTGCGATCCA
AATGAGCCTCAACGATCGAATTATCTCTCGTCATGGCAGCAGGCCTTTTT
CTCTTCTTTTTGGTAGGAGGATGAATGGTTTTGAAGATTTTCTCGGACAA
CGAGTCTTCGTTTATCTCAGAAGTGTTGGTCGAGTTGAGGAAACTGTCGG
GTTTCCAACATCGTCGCATCATGAAGTATTATCCGAGACAGAATGGAGTC
GTGGAGGTTTATGTTCAAGAGACGAAGAATTTATTGAAAAAGTGGGCGAA
AGGGGATATGCAGAATTGGGAACAATTCGTTCCTGCGATCCAAATGAGCC
TCAACGATCGAATTATCTCTCGTCATGGCAGCAGGCCTTTTTCTCTTCTT
TTTGGTAGGAGGATGAATGGTTTTGAAGATTTTCCGAATGCGGAAAAATG
GGGTGAGACCGTTTGGTCTGCCATCTCTGAAAAATCGTCGAAAACCGGTC
AGGCAATCGTCGACCGTAGCAACAAGAAGGGGGGTGGGAAATATAAGAGG
GAAACTCTTAATGTTGGGGACATGGTTGTGAAAGCCATTCAGAGGAAGAG
GGGGAAGATGGGTGAAAAATGGGAAGGCCCATTTGTTGTGAAGGAGTTTG
ACAACAAGTTGGGTGGATACAAAATCCAGACGATGGACGGGAAATTGTTG
AAAGACTATTTTCCCATCAAGTTTCTGAAACTGGTTGAGAAGGTGATCGA
GGAGAGCGATGATCCGGAATATGATGTCGAAAAGATTCTGGGCCATCGTG
GCGACGCTGGGAATCGAGAATACAAGATTCAATGGGAGGGCTACAAGAGG
CCGACCTGGGAACCAGAGAGGAATATCGTTGCCTCCGATTGCGTGAAAGA
ATACTGGACGCGAGTCAACAAGGAGAAGCGAATGCGGAAAAATGGGGTGA
GACCGTTTGGTCTGCCATCTCTGAAAAATCGTCGAAAACCGGTCAGGCAA
TCGTCGACCGTAGCAACAAGAAGGGGGGTGGGAAATATAAGAGGGAAACT
CTTAATGTTGGGGACATGGTTGTGAAAGCCATTCAGAGGAAGAGGGGGAA
GATGGGTGAAAAATGGGAAGGCCCATTTGTTGTGAAGGAGTTTGACAACA
AGTTGGGTGGATACAAAATCCAGACGATGGACGGGAAATTGTTGAAAGAC
TATTTTCCCATCAAGTTTCTGAAACTGGTTGAGAAGGTGATCGAGGAGAG
CGATGATCCGGAATATGATGTCGAAAAGATTCTGGGCCATCGTGGCGACG
CTGGGAATCGAGAATACAAGATTCAATGGGAGGGCTACAAGAGGCCGACC
TGGGAACCAGAGAGGAATATCGTTGCCTCCGATTGCGTGAAAGAATACTG
GACGCGAGTCAACAAGGAGAAG
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