mRNA_M-pyrifera_M_contig87243.20282.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87243.20282.1
Unique NamemRNA_M-pyrifera_M_contig87243.20282.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A7S1C7U9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7U9_9STRA)

HSP 1 Score: 235 bits (600), Expect = 6.890e-73
Identity = 125/231 (54.11%), Postives = 158/231 (68.40%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAIAAAL 690
            DF+AE  LMTRL+H N+VR +GV  EPL LVTEFCS G++FD+LH++   L WP RLRMA +AA+GM +LH+      PV+IHRDLK+LNLLVD ++ +KV+DFGLSRF A T++            MT   G++HWM+P+V+ G RY+E ADVYSFGI LWE+LTR+ PY+GMQP+QVGIAV  RG R  P V  DT       Y  L   CW  +P  RP+F  I  AL
Sbjct:  151 DFKAEVKLMTRLRHPNIVRFMGVVVEPLCLVTEFCSNGNLFDLLHNNPIALSWPLRLRMALEAAQGMHFLHNL----DPVVIHRDLKSLNLLVDDEFHIKVSDFGLSRFKAMTSTTY----------MTAQCGTFHWMAPEVVGGNRYTERADVYSFGINLWELLTRQVPYKGMQPMQVGIAVYTRGVR--PPVPPDT----PPAYAALMAACWHANPNYRPTFRRIIEAL 361
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BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A5A8D328_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D328_CAFRO)

HSP 1 Score: 244 bits (623), Expect = 9.890e-71
Identity = 126/231 (54.55%), Postives = 160/231 (69.26%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAIAAAL 690
            DF+AE  L+ RL H N+V  IGVCP+PLALVTEFCSRG++FD+LH++  ELPW  R+  A DAARGM +LH  +    PV+IHRDLK+LNLLV + WRVKV+DFGLSRF A ++S           L T   G++HWM+P+VI G RY+E ADV+SFG+ LWE+ TR TPY+GMQP+QVG+AVL RG R  P + AD        +  L + CW+ DP  RPSF  +  AL
Sbjct: 1114 DFKAEVALLARLVHPNIVAFIGVCPDPLALVTEFCSRGNLFDLLHAEAVELPWRLRVSFALDAARGMRFLHSRS----PVVIHRDLKSLNLLVSASWRVKVSDFGLSRFKAQSSSGS---------LYTAQCGTFHWMAPEVIAGHRYTEKADVFSFGVNLWELFTRDTPYKGMQPMQVGLAVLHRGLR--PRLPADC----PAMWSALMRACWRADPSRRPSFTQLVPAL 1325
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A5A8CAD5_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAD5_CAFRO)

HSP 1 Score: 244 bits (623), Expect = 1.040e-70
Identity = 126/231 (54.55%), Postives = 160/231 (69.26%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAIAAAL 690
            DF+AE  L+ RL H N+V  IGVCP+PLALVTEFCSRG++FD+LH++  ELPW  R+  A DAARGM +LH  +    PV+IHRDLK+LNLLV + WRVKV+DFGLSRF A ++S           L T   G++HWM+P+VI G RY+E ADV+SFG+ LWE+ TR TPY+GMQP+QVG+AVL RG R  P + AD        +  L + CW+ DP  RPSF  +  AL
Sbjct: 1756 DFKAEVALLARLVHPNIVAFIGVCPDPLALVTEFCSRGNLFDLLHAEAVELPWRLRVSFALDAARGMRFLHSRS----PVVIHRDLKSLNLLVSASWRVKVSDFGLSRFKAQSSSGS---------LYTAQCGTFHWMAPEVIAGHRYTEKADVFSFGVNLWELFTRDTPYKGMQPMQVGLAVLHRGLR--PRLPADC----PAMWSALMRACWRADPSRRPSFTQLVPAL 1967
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A835YHY9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHY9_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.150e-63
Identity = 112/231 (48.48%), Postives = 143/231 (61.90%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAIAAAL 690
            DF+ EA L++RL+H N++  IG   +P+ +V E+CSRG++  +L+    +LPWPRRLRM  D A GM YLH       PVIIHRDLK+LN+LVD +W  KV DFGLSRF A + S            MT   G+YHWMSP+VI    Y+E ADV+SFGI++WE+ TR  PY+GMQPVQV  AVL R ER         +L        L ++CW  DP  RP+F  I A L
Sbjct:  114 DFKTEAALLSRLRHRNIIAPIGATADPVTIVMEYCSRGNLMMLLNDTAIDLPWPRRLRMCVDVAAGMRYLHTQ----NPVIIHRDLKSLNVLVDDNWVSKVTDFGLSRFKATSESEK----------MTGQAGTYHWMSPEVINSQHYTEKADVFSFGIIMWEVYTRSIPYDGMQPVQVVAAVLGRRERPRIPATCPPILAA------LIQQCWSHDPAVRPAFDEIHARL 324
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BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A6U4KGP8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KGP8_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.480e-60
Identity = 107/231 (46.32%), Postives = 137/231 (59.31%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAIAAAL 690
            DF  E  L+ RL H N+V  +G   +PL +VTEFCSRG++  +LH++   L W R+L +  D ARGM YLH  A R  P I+HRDLK+LN+L+D  W  KV DFGLSRF A + +            MT   G+YHWM+P+VI   +Y E ADVYSFGI+LWE+  R  PYEGM PVQ+  AV+ R ER+     A        +Y  L  RCW  DP  RP F+ +   L
Sbjct:  138 DFECEVDLLRRLDHPNIVAFMGTTVDPLGVVTEFCSRGNLMVMLHNESVALTWARKLSIVTDTARGMCYLH--AQR--PTILHRDLKSLNILLDEHWNTKVTDFGLSRFKADSIAGN----------MTGQTGTYHWMAPEVINAEKYDERADVYSFGIILWEVYGRAIPYEGMTPVQIVAAVVARRERLPIPAGAPP------QYADLIARCWAHDPAERPQFSEVLGVL 348
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A836CAX7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX7_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.090e-59
Identity = 106/224 (47.32%), Postives = 140/224 (62.50%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQ-ELPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSF 669
            DF+ EA L++RL+H N+V  +G   +P+ +V E+CSRG++  +L+ D  ++ W R+ +M  D A GM YLH       PVIIHRDLK+LN+L+D  W  KV DFGLSRF A + S            MT   G+YHWMSP+VI    Y+E ADV+SFGI++WEI TR  PY+GMQPVQV  AV+ R ER  P + A           +L ++CWQ DP  RPSF
Sbjct:   47 DFKTEAALLSRLRHRNIVAPLGATIDPVTIVMEYCSRGNLMILLNDDAVDVTWARKRQMCLDVACGMRYLHTQT----PVIIHRDLKSLNVLIDEAWVCKVTDFGLSRFKATSESER----------MTGQAGTYHWMSPEVINSQHYTEKADVFSFGIIMWEIYTRNIPYDGMQPVQVVAAVITRRER--PRLPA----ACPAPLAQLIQQCWQHDPSVRPSF 250
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BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: D8MBR4_BLAHO (Protein kinase domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MBR4_BLAHO)

HSP 1 Score: 196 bits (499), Expect = 1.120e-58
Identity = 104/237 (43.88%), Postives = 143/237 (60.34%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQE----------LPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLET-KKRYLRLAKRCWQTDPRNRPSFAAI 678
            DF +E  L+  L+H N+V  +G+   P+ LVTE+C  G++FD+LH   +          +PW RR+R+A D ARGM +LH       PVIIHRDLK+LN+L++  W  KV+DFGLSRF A   +           LMT   G++ WM+P+V+ G  Y+E ADVYS+GI LWE+LTR+ PY+GMQP+QV + V    +R+        + ET  + Y  L + CW  DP  RPSFA I
Sbjct:   78 DFSSEVMLLRTLRHPNIVIFMGIVMNPVCLVTEYCHNGNLFDLLHETVDDKRGEHYAVQIPWQRRIRIALDVARGMNFLHTST----PVIIHRDLKSLNILINEKWTAKVSDFGLSRFKAADTAHD---------LMTGQCGTFQWMAPEVMDGHNYTEKADVYSYGINLWELLTRKIPYDGMQPMQVAMMVHTHKKRLP-------IPETCPEWYAMLIRDCWDPDPEARPSFAEI 294
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: UPI000711E13A (serine/threonine-protein kinase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711E13A)

HSP 1 Score: 203 bits (517), Expect = 1.700e-56
Identity = 111/236 (47.03%), Postives = 144/236 (61.02%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHS-----DQE-----LPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAI 678
            DF +E  LM  L+H N+V  +G+  +P+ LVTE+C  G++FD+LH      D E     +PW RR+R+A D ARGM +LH       PVIIHRDLK+LN+LVD  W  KV+DFGLSRF +  A            +MT   G+Y WM+P+VI G  Y+E ADVYS+G+ LWE+LTR+ PY+GMQP+QV + V    +R+      DT  E    Y  L K CW  DP  RPSFA I
Sbjct: 1257 DFHSEVVLMRALRHPNIVLFMGLVMDPVCLVTEYCHNGNLFDLLHDTVDDEDSENYAVKIPWQRRIRIALDVARGMNFLHTST----PVIIHRDLKSLNILVDEKWTAKVSDFGLSRFKSAAAHG----------MMTGQCGTYQWMAPEVIGGHIYTEKADVYSYGVNLWELLTRKIPYDGMQPMQVAMMVHTHKKRLPI---PDTCPEW---YATLIKDCWDQDPDARPSFAEI 1472
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: A0A196SBV3_BLAHN (PAS domain-containing protein tyrosine kinase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBV3_BLAHN)

HSP 1 Score: 203 bits (517), Expect = 1.710e-56
Identity = 112/237 (47.26%), Postives = 144/237 (60.76%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHS---DQE--------LPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAI 678
            DF +E  LM  L+H N+V  +G+  +P+ LVTE+C  G++FD+LH    D E        +PW RR+R+A D ARGM +LH       PVIIHRDLK+LN+LVD  W  KV+DFGLSRF +  A            +MT   G+Y WM+P+VI G  Y+E ADVYSFG+ LWE+LTR+ PY+GMQP+QV + V    +R+      DT  E    Y  L K CW  DP  RPSFA I
Sbjct: 1305 DFHSEVVLMRALRHPNIVIFMGLVMDPVCLVTEYCHNGNLFDLLHDTVDDDENSENYAVKIPWQRRVRIALDVARGMNFLHTST----PVIIHRDLKSLNILVDEKWTAKVSDFGLSRFKSAAAHG----------MMTGQCGTYQWMAPEVIGGHIYTEKADVYSFGVNLWELLTRKIPYDGMQPMQVAMMVHTHKKRLPI---PDTCPEW---YATLIKDCWDQDPDARPSFAEI 1521
[Close]
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Match: D8M2M2_BLAHO (Protein kinase domain-containing protein n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2M2_BLAHO)

HSP 1 Score: 196 bits (497), Expect = 2.260e-56
Identity = 106/235 (45.11%), Postives = 139/235 (59.15%), Query Frame = 1 
Query:    1 DFRAEATLMTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQE---------LPWPRRLRMARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRFLAPTASAXXXXXXXXXLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGIVLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRLAKRCWQTDPRNRPSFAAI 678
            DF +E  LM  L+H N+V  +G+  +P+ LVTE+C  G++FD+LH   +         +PW RR+R+A D ARGM +LH       P+IIHRDLK+LN+LVD  W  KV+DFGLSRF                L      G+Y WM+P+VI G  Y+E ADVYS+GI LWE+LTR+ PY+GMQP+QV + V    +R+      DT  E    Y  L + CW  DP  RPSFA I
Sbjct:  267 DFHSEVVLMRALRHPNIVIFMGLVMDPVCLVTEYCHNGNLFDLLHDTVDENEEHYAVQIPWQRRVRIALDVARGMNFLHTST----PIIIHRDLKSLNILVDEKWTAKVSDFGLSRFKV----------LDVLLFSFFLCGTYQWMAPEVIGGHIYTEKADVYSYGINLWELLTRKIPYDGMQPMQVAMMVHTHKKRLPI---PDTCPEW---YATLIRDCWDQDPDARPSFAEI 481
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87243.20282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C7U9_9STRA6.890e-7354.11Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8D328_CAFRO9.890e-7154.55Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CAD5_CAFRO1.040e-7054.55Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A835YHY9_9STRA2.150e-6348.48Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6U4KGP8_9STRA8.480e-6046.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836CAX7_9STRA1.090e-5947.32Kinase-like domain-containing protein (Fragment) n... [more]
D8MBR4_BLAHO1.120e-5843.88Protein kinase domain-containing protein n=1 Tax=B... [more]
UPI000711E13A1.700e-5647.03serine/threonine-protein kinase n=1 Tax=Blastocyst... [more]
A0A196SBV3_BLAHN1.710e-5647.26PAS domain-containing protein tyrosine kinase n=1 ... [more]
D8M2M2_BLAHO2.260e-5645.11Protein kinase domain-containing protein n=2 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87243contigM-pyrifera_M_contig87243:15..767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.7
Seed ortholog evalue3e-42
Seed eggNOG ortholog2880.D8LLR2
Preferred nameATMRK1
KEGG koko:K04424,ko:K16799
KEGG Pathwayko04010,ko04341,map04010,map04341
KEGG ModuleM00678
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004485,GO:0004672,GO:0004674,GO:0004712,GO:0004713,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0010154,GO:0010344,GO:0016020,GO:0016301,GO:0016310,GO:0016421,GO:0016740,GO:0016772,GO:0016773,GO:0016874,GO:0016885,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0022414,GO:0023052,GO:0031974,GO:0032501,GO:0032502,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0140096,GO:1901564
EggNOG free text desc.clathrin-coated pit assembly
EggNOG OGsCOG0515@1,KOG0192@2759,KOG1989@1,KOG1989@2759
EC2.7.11.25
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03000
Exons2
Model size690
Cds size666
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87243.20282.1prot_M-pyrifera_M_contig87243.20282.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87243 39..767 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816781.8649726-UTR-M-pyrifera_M_contig87243:14..381622816781.8649726-UTR-M-pyrifera_M_contig87243:14..38Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87243 15..38 +
1692278175.1222208-UTR-M-pyrifera_M_contig87243:14..381692278175.1222208-UTR-M-pyrifera_M_contig87243:14..38Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87243 15..38 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816781.8756497-CDS-M-pyrifera_M_contig87243:38..5701622816781.8756497-CDS-M-pyrifera_M_contig87243:38..570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87243 39..570 +
1692278175.1358364-CDS-M-pyrifera_M_contig87243:38..5701692278175.1358364-CDS-M-pyrifera_M_contig87243:38..570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87243 39..570 +
1622816781.8860137-CDS-M-pyrifera_M_contig87243:633..7671622816781.8860137-CDS-M-pyrifera_M_contig87243:633..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87243 634..767 +
1692278175.1461482-CDS-M-pyrifera_M_contig87243:633..7671692278175.1461482-CDS-M-pyrifera_M_contig87243:633..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87243 634..767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87243.20282.1

>prot_M-pyrifera_M_contig87243.20282.1 ID=prot_M-pyrifera_M_contig87243.20282.1|Name=mRNA_M-pyrifera_M_contig87243.20282.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp
MTRLKHENVVRCIGVCPEPLALVTEFCSRGSVFDILHSDQELPWPRRLRM
ARDAARGMAYLHDGAARGGPVIIHRDLKTLNLLVDSDWRVKVADFGLSRF
LAPTASAAAAGSSSSSLLMTMAVGSYHWMSPQVIQGGRYSESADVYSFGI
VLWEILTRRTPYEGMQPVQVGIAVLQRGERIDPGVDADTLLETKKRYLRL
AKRCWQTDPRNRPSFAAIAAAL
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mRNA from alignment at M-pyrifera_M_contig87243:15..767+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87243.20282.1 ID=mRNA_M-pyrifera_M_contig87243.20282.1|Name=mRNA_M-pyrifera_M_contig87243.20282.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=753bp|location=Sequence derived from alignment at M-pyrifera_M_contig87243:15..767+ (Macrocystis pyrifera P11B4 male)
GACTTTCGAGCGGAAGCAACGTTGATGACCCGGTTGAAGCATGAGAATGT
TGTTCGGTGCATTGGTGTTTGTCCGGAGCCTCTTGCTCTTGTGACAGAGT
TTTGTTCTCGTGGTTCTGTGTTTGATATTTTGCACAGTGATCAAGAGTTG
CCTTGGCCTCGTCGGTTACGCATGGCTCGTGATGCTGCAAGAGGGATGGC
TTATTTGCATGATGGAGCTGCGCGTGGAGGTCCTGTGATTATCCATCGTG
ATTTGAAGACGTTGAATTTGCTTGTTGATTCTGATTGGCGTGTGAAGGTT
GCTGACTTTGGATTGAGTCGATTCCTTGCACCGACAGCTTCTGCAGCGGC
TGCTGGTTCGTCATCTTCTTCTCTGTTGATGACGATGGCTGTTGGCTCTT
ACCACTGGATGTCTCCGCAAGTGATTCAAGGTGGGAGATATTCTGAAAGT
GCTGATGTGTATTCCTTTGGAATTGTGCTTTGGGAGATTCTGACGCGTCG
CACTCCGTATGAAGGGATGCAACCTGTTCAAGTTGGGATTGCAGTGTTGC
AGCGAGGTCTTCGTCCTTCTCTTCCGGAAAAGGATGAACCCGAATACGAC
GAGAAGATTGCGAAGCTAGGAGAGCGCATTGATCCTGGCGTGGATGCGGA
CACTTTGTTGGAAACGAAGAAACGATATCTCCGACTTGCCAAGCGTTGTT
GGCAAACGGATCCAAGAAATCGGCCATCTTTTGCTGCAATCGCTGCAGCG
TTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87243:15..767+

>mRNA_M-pyrifera_M_contig87243.20282.1 ID=mRNA_M-pyrifera_M_contig87243.20282.1|Name=mRNA_M-pyrifera_M_contig87243.20282.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig87243:15..767+ (Macrocystis pyrifera P11B4 male)
ATGACCCGGTTGAAGCATGAGAATGTTGTTCGGTGCATTGGTGTTTGTCC
GGAGCCTCTTGCTCTTGTGACAGAGTTTTGTTCTCGTGGTTCTGTGTTTG
ATATTTTGCACAGTGATCAAGAGTTGCCTTGGCCTCGTCGGTTACGCATG
GCTCGTGATGCTGCAAGAGGGATGGCTTATTTGCATGATGGAGCTGCGCG
TGGAGGTCCTGTGATTATCCATCGTGATTTGAAGACGTTGAATTTGCTTG
TTGATTCTGATTGGCGTGTGAAGGTTGCTGACTTTGGATTGAGTCGATTC
CTTGCACCGACAGCTTCTGCAGCGGCTGCTGGTTCGTCATCTTCTTCTCT
GTTGATGACGATGGCTGTTGGCTCTTACCACTGGATGTCTCCGCAAGTGA
TTCAAGGTGGGAGATATTCTGAAAGTGCTGATGTGTATTCCTTTGGAATT
GTGCTTTGGGAGATTCTGACGCGTCGCACTCCGTATGAAGGGATGCAACC
TGTTCAAGTTGGGATTGCAGTGTTGCAGCGAGATGACCCGGTTGAAGCAT
GAGAATGTTGTTCGGTGCATTGGTGTTTGTCCGGAGCCTCTTGCTCTTGT
GACAGAGTTTTGTTCTCGTGGTTCTGTGTTTGATATTTTGCACAGTGATC
AAGAGTTGCCTTGGCCTCGTCGGTTACGCATGGCTCGTGATGCTGCAAGA
GGGATGGCTTATTTGCATGATGGAGCTGCGCGTGGAGGTCCTGTGATTAT
CCATCGTGATTTGAAGACGTTGAATTTGCTTGTTGATTCTGATTGGCGTG
TGAAGGTTGCTGACTTTGGATTGAGTCGATTCCTTGCACCGACAGCTTCT
GCAGCGGCTGCTGGTTCGTCATCTTCTTCTCTGTTGATGACGATGGCTGT
TGGCTCTTACCACTGGATGTCTCCGCAAGTGATTCAAGGTGGGAGATATT
CTGAAAGTGCTGATGTGTATTCCTTTGGAATTGTGCTTTGGGAGATTCTG
ACGCGTCGCACTCCGTATGAAGGGATGCAACCTGTTCAAGTTGGGATTGC
AGTGTTGCAGCGAGGAGAGCGCATTGATCCTGGCGTGGATGCGGACACTT
TGTTGGAAACGAAGAAACGATATCTCCGACTTGCCAAGCGTTGTTGGCAA
ACGGATCCAAGAAATCGGCCATCTTTTGCTGCAATCGCTGCAGCGTTAGA
GAGCGCATTGATCCTGGCGTGGATGCGGACACTTTGTTGGAAACGAAGAA
ACGATATCTCCGACTTGCCAAGCGTTGTTGGCAAACGGATCCAAGAAATC
GGCCATCTTTTGCTGCAATCGCTGCAGCGTTA
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