mRNA_M-pyrifera_M_contig87170.20271.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A7K1ZDP1_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDP1_9ACTN) HSP 1 Score: 300 bits (768), Expect = 5.350e-97 Identity = 146/245 (59.59%), Postives = 196/245 (80.00%), Query Frame = 1 Query: 34 FAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELT-DSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALAE 765 FAALRYRN+R++W++AI+S++GR+FQ +A+PL++Y+L+ SAAWVGLAGF QLLP A+L P AGAIADRY RR+ILI+TQ+ Q++ + +FV MWF GVRSP AYV S+ AG ++GLNLPAWQAFVSELVPR+TLMSA+TLNSAQFN+AR+LGP AGVVI WGPGWAF++NAVS+ +I +L + +P + + + R+RP EF A ++R + GI TA+ +IGFFG+ +Q MS+ +AE Sbjct: 12 FAALRYRNYRLMWISAIISSSGRWFQVLAIPLIVYDLSGQSAAWVGLAGFTQLLPVAILCPFAGAIADRYPRRTILIVTQSTQTVVAAVFVTMWFGGVRSPGAYVAVSILAGTASGLNLPAWQAFVSELVPRDTLMSAVTLNSAQFNMARMLGPSMAGVVIAQWGPGWAFVLNAVSYFAVIASLASLRLPRLTAESNGRLRPLSEFGEAVAYTRKKAGISTAVFVGAVIGFFGITAQQMSIVVAE 256
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A3M2HFT5_ACTSX (MFS transporter n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HFT5_ACTSX) HSP 1 Score: 291 bits (744), Expect = 3.060e-93 Identity = 149/241 (61.83%), Postives = 179/241 (74.27%), Query Frame = 1 Query: 40 ALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALA 762 ALR NFR W+ I+SN GRFFQA+A+P V++ELT SA WVGLAGFAQ P AL+GP+AGAIADRY RR +L+ TQ+ Q+L SL F+A+W GVRSPTAYV SVAAGV+ GLNLPAWQAFVSELVPR L++A+TLNSAQFN AR+ GP AGV + GP WAF +NAVSF +I+AL ++ P DRS RMRP RE + R RPGI+TAI TV +IG FGL Q++SV A Sbjct: 19 ALRQPNFRRFWVGGIISNTGRFFQAIALPAVVWELTASAGWVGLAGFAQFFPMALVGPVAGAIADRYTRRRVLLFTQSSQALVSLGFMALWAGGVRSPTAYVAMSVAAGVTGGLNLPAWQAFVSELVPRELLLNAVTLNSAQFNAARMFGPALAGVTVASLGPAWAFAINAVSFGAVIIALLRIDTPPAVTDRSTRMRPLREMADTVRHVRRRPGIVTAIVTVALIGLFGLPIQSLSVVFA 259
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A358A270_9ACTN (MFS domain-containing protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A270_9ACTN) HSP 1 Score: 268 bits (684), Expect = 1.850e-84 Identity = 132/244 (54.10%), Postives = 175/244 (71.72%), Query Frame = 1 Query: 34 FAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALAE 765 F+ R RN+R+ W + SN GR+FQ +A+PLV+++LTDSA WVG AGFAQ+LP AL+GP GAIADR RR +L++TQ LQ+ +L + +WF GVRSP AYV S G++AGLNLPAWQA VSE+VPR L++ ITLNSAQFN +R++GP G I ++GPGWAF VNA+S+T ++ L ++ + V R RMRP EF A + + GI TAI TV++IGFFGL+ QT+SV +AE Sbjct: 21 FSVFRLRNYRLFWFGGLTSNIGRWFQTLAIPLVVFDLTDSAGWVGFAGFAQILPMALMGPYGGAIADRDPRRKVLLVTQTLQAFVALGLMTLWFIGVRSPGAYVTVSALVGMTAGLNLPAWQAIVSEIVPREQLLAGITLNSAQFNASRMIGPALGGAAIAWFGPGWAFFVNAISYTAVLTGLALMRLDIVHRRPEGRMRPLHEFAGAARNAFQSEGIRTAILTVSMIGFFGLSLQTLSVTVAE 264
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A6N8YCA2_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YCA2_9ACTN) HSP 1 Score: 215 bits (547), Expect = 6.650e-64 Identity = 112/248 (45.16%), Postives = 155/248 (62.50%), Query Frame = 1 Query: 22 PPGIFAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALAE 765 PP FA+ RYR+FR W I S + R+FQ VA+P VI++LT S WVG AGFAQ A++ P AG + D Y RR ILI++Q+ L ++ W GVRSP+AYV +VA+G+ GLNLP WQ+FVSELVPR+ L++A+TLNSAQFN +RL+GP+ G+ + GP AF V+A ++ AL +V + +R R +A ++ R R G++ A TV +IG GL Q ++V AE Sbjct: 15 PPAAFASFRYRDFRYFWFGGITSMSARWFQYVALPAVIWDLTASPGWVGFAGFAQFTAMAVVAPAAGMVGDHYSRRKILIVSQSFMGLVAVAMALAWTQGVRSPSAYVALAVASGLGGGLNLPVWQSFVSELVPRDLLLNAVTLNSAQFNSSRLVGPMLGGITVAAAGPEVAFWVSAAGAVVVVFALALVRSGQAVLAGTPSLRVIRNTLAVARYVRERRGLVVAFVTVALIGALGLPIQILTVVFAE 262
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A6B1E7H5_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E7H5_9ACTN) HSP 1 Score: 213 bits (543), Expect = 5.390e-63 Identity = 112/249 (44.98%), Postives = 154/249 (61.85%), Query Frame = 1 Query: 22 PPGIFAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRS-QRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALAE 765 PP FA+ +R FR W ++N+ R+FQ VA+P+V+++LT S WVGLAGFAQ A++ P AG +AD Y RR IL+I+Q+ + +++ W GVRSP AYV + A+GV GLNLP WQAFVSELVPR+ L++A+TLNS QFN +RL+GP+ G+ + GP AF V+A ++ AL V R MR R +A ++ R R G++ A TVT+IG GL Q + V AE Sbjct: 45 PPAAFASFSHRGFRYFWFGGFITNSARWFQYVALPVVVWDLTGSPGWVGLAGFAQFAAMAMVAPAAGVVADHYSRRRILMISQSFMGVVAVVMALAWIQGVRSPAAYVALAAASGVGGGLNLPVWQAFVSELVPRDLLLNAVTLNSTQFNSSRLIGPMLGGITVAAAGPAAAFWVSAAGALVVLFALARVESSIAVAGRGIPSMRLIRNTMAVARYVRARRGLVVAFVTVTLIGSVGLPIQMLCVVFAE 293
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A6J4I2J0_9ACTN (MFS domain-containing protein n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4I2J0_9ACTN) HSP 1 Score: 211 bits (537), Expect = 1.690e-62 Identity = 108/230 (46.96%), Postives = 151/230 (65.65%), Query Frame = 1 Query: 40 ALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFG 729 A + R+F + W A+ SN G + Q +AVP V+YE+T SA WVGLA F Q +P LLGPLAG++ADR+ RR +L+ITQ+L +L+++ A W GVRSP + +GV AG+N+P+WQ+FV++LVPR L+SA+ LNS QFN AR LGP AG+++ GP WAFL+NAVSF +++AL +V R R+F A ++RT+PGI+ I +IG G Sbjct: 30 AFKNRDFTIFWFGALASNTGSWVQNLAVPYVLYEVTQSAFWVGLATFFQFIPAMLLGPLAGSVADRFDRRKVLLITQSLLALSAVALWAAWAGGVRSPGVILALVALSGVFAGINIPSWQSFVNDLVPREDLLSAVALNSLQFNAARALGPGIAGIMLATLGPSWAFLLNAVSFGFVLLALALVRTRQAARTSVLTGGFLRQFRRAMAYTRTQPGIVVGIVVAVLIGGLG 259
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A538FEH6_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FEH6_9ACTN) HSP 1 Score: 208 bits (529), Expect = 1.690e-62 Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 1 Query: 25 PGIFAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVI-YELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFG 729 P AA R R+F + W A+VSN G + Q V VP VI Y LT SA W+GLA FAQL P+ L+GP+AGA+A+R RR +LI++ A+Q L +L AMW AG RSPT V+ G++ G +P+WQAF+++LVPR L++AITLNSAQFN AR LGP G+V+ +GP WAFL NA+SF +I L ++ V R+R +R R R+F + R GI+ AI V + F G Sbjct: 24 PDAVAAFRSRDFTLFWSGALVSNIGTWMQNVTVPYVIFYRLTHSALWLGLAAFAQLFPSLLIGPVAGALAERLDRRRVLIVSNAVQGLLALGLWAMWVAGGRSPTLMVVLVAGGGLAFGATMPSWQAFLTDLVPREDLLNAITLNSAQFNGARALGPAVGGLVLGRFGPSWAFLFNALSFVAVIAVLTLIQSTAVARERVRR-RVLRDFADGVAYVRRHGGILLAIGIVMAVFFLG 258
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A5Q2RQI3_9ACTN (MFS transporter n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RQI3_9ACTN) HSP 1 Score: 211 bits (536), Expect = 3.870e-62 Identity = 107/242 (44.21%), Postives = 155/242 (64.05%), Query Frame = 1 Query: 40 ALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFGLASQTMSVALAE 765 A R+R+F + W A+ SN G + Q + VP V+YE+T SA WVG A FAQ +P LGPLAG+IADR+ RR +LI+TQ+L +LA+ GVR+ A + +GV AG+N+P+WQ+FV+++VP+ L+SA+TLNS QFN AR +GP AG+++ +GP WAFLVN +SF ++VAL +V R W +F A +++RT+PGI+ + ++G G Q +V LAE Sbjct: 46 AFRHRDFAIFWTGALASNTGSWVQNLTVPFVLYEITRSATWVGAATFAQFIPAMALGPLAGSIADRHDRRRVLILTQSLMALAAFALWXXXALGVRNGLAILALVGLSGVIAGINIPSWQSFVNDMVPKEDLLSAVTLNSLQFNAARAIGPAIAGLLLHSFGPSWAFLVNGLSFVFVLVALLLVRTRPPRRATPLSGSFWHQFARAVRYTRTQPGIVVGMLCAVLVGALGNPVQQFTVILAE 287
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: UPI001E5869FB (MFS transporter n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5869FB) HSP 1 Score: 209 bits (532), Expect = 1.630e-61 Identity = 112/243 (46.09%), Postives = 152/243 (62.55%), Query Frame = 1 Query: 4 EAASSEPPGIFAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIVNVPHVERDRSQ-RMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFG 729 +A+++E FA+ R RNF V+W A++VS G++ Q VAVP V+++LT S AW+G F LLP LLGP+AG++ADR+ RR +L I LQ L + W AGVRS ++ A AG+ + +WQAFV LVPR L++A+TLNSAQFN AR GP G+VI GP WAF VNAVSF I+ L +V VP +ER SQ R R E A ++ RT+ GI+ +++ V +G G Sbjct: 22 DASTAERISAFASFRERNFAVMWTASLVSQTGQWLQNVAVPFVVFQLTGSGAWLGFTAFMMLLPMVLLGPMAGSVADRFDRRRVLAIGAGLQGLLTAGLWLTWAAGVRSVGVLIVLVTAVSCVAGITVASWQAFVPSLVPRRLLLNAVTLNSAQFNAARAFGPALGGLVIATAGPSWAFFVNAVSFFAIVGGLVLVKVPRIERPPSQGRPRVLAEMWTAMRYVRTQRGIVASLAVVFALGLLG 264
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Match: A0A7K0LNH3_9ACTN (MFS transporter n=2 Tax=root TaxID=1 RepID=A0A7K0LNH3_9ACTN) HSP 1 Score: 205 bits (522), Expect = 1.810e-60 Identity = 108/235 (45.96%), Postives = 154/235 (65.53%), Query Frame = 1 Query: 37 AALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDSAAWVGLAGFAQLLPTALLGPLAGAIADRYQRRSILIITQALQSLASLIFVAMWFAGVRSPTAYVIASVAAGVSAGLNLPAWQAFVSELVPRNTLMSAITLNSAQFNLARLLGPLGAGVVIKFWGPGWAFLVNAVSFTTIIVALFIV----NVPHVERDRSQRMRPWREFVAAFQFSRTRPGIITAISTVTIIGFFG 729 AA R+R++R+ W ++SN+G + Q++ VP V++++T SA WVGLA AQ LP LL PL G++ADR RR +L+ TQ+ +L +L + W +GVRSP + V GV G+NLP+WQAFVS+LVPR+ L+SA+TLNS QFN AR +GP AGVVI +GP WAF +NA SF ++VAL +V +VP V D +R+F AA ++R+ PG++ ++G G Sbjct: 9 AAFRHRDYRIFWAGGLISNSGTWLQSLTVPFVLFQITGSALWVGLAAVAQFLPMVLLSPLGGSLADRRSRRRVLLATQSGMALTALGLLITWVSGVRSPVVLLAFLVIGGVINGINLPSWQAFVSDLVPRDDLLSAVTLNSLQFNGARAIGPAIAGVVIALFGPAWAFGLNAASFVFVLVALLLVRGRVHVPSVNTDGV-----FRQFRAALGYARSEPGLLLTFLVSGLLGGLG 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87170.20271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87170.20271.1 >prot_M-pyrifera_M_contig87170.20271.1 ID=prot_M-pyrifera_M_contig87170.20271.1|Name=mRNA_M-pyrifera_M_contig87170.20271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp TEAASSEPPGIFAALRYRNFRVVWLAAIVSNAGRFFQAVAVPLVIYELTDback to top mRNA from alignment at M-pyrifera_M_contig87170:3..767- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87170.20271.1 ID=mRNA_M-pyrifera_M_contig87170.20271.1|Name=mRNA_M-pyrifera_M_contig87170.20271.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig87170:3..767- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87170:3..767- >mRNA_M-pyrifera_M_contig87170.20271.1 ID=mRNA_M-pyrifera_M_contig87170.20271.1|Name=mRNA_M-pyrifera_M_contig87170.20271.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig87170:3..767- (Macrocystis pyrifera P11B4 male)back to top |