mRNA_M-pyrifera_M_contig87112.20259.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A674IDX1_TERCA (Uncharacterized protein n=3 Tax=Emydidae TaxID=8476 RepID=A0A674IDX1_TERCA) HSP 1 Score: 58.2 bits (139), Expect = 1.660e-8 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 40 NNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAITRN 222 N F + GELQ+A+ F+ A+KLNP +++Y+NRA + V KP AAI+D N+AI N Sbjct: 110 NREAFDVLSKGELQKAIDLFSDAIKLNPYLVNSYTNRANVFVHLQKPNAAISDCNRAIELN 170
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A4D9E414_9SAUR (Sphingosine kinase 1 n=7 Tax=Durocryptodira TaxID=1579337 RepID=A0A4D9E414_9SAUR) HSP 1 Score: 58.2 bits (139), Expect = 3.990e-8 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 40 NNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAITRN 222 N F + GELQ+A+ F+ A+KLNP +++Y+NRA + V KP AAI+D N+AI N Sbjct: 107 NREAFDVLSKGELQKAIDLFSDAIKLNPYLVNSYTNRANVFVHLQKPNAAISDCNRAIELN 167
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: UPI0019B0D229 (Tetratricopeptide repeat protein n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=UPI0019B0D229) HSP 1 Score: 56.2 bits (134), Expect = 1.660e-7 Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 7 VTLNPRFSDGYNNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAI 213 + L+P + Y NRG Q + EA+ DFT A+K N SISAY+NRA L+ + + AI DL Q I Sbjct: 193 IELDPEYEQTYINRGDYYFQQQKTNEAINDFTTAIKKNTKSISAYANRANALMFDKQYKEAIIDLKQCI 261
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A8J1TEU1_OWEFU (Ofus.G03138 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TEU1_OWEFU) HSP 1 Score: 52.4 bits (124), Expect = 4.160e-6 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 61 MQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAITRN 222 + +G L++A+G FT A+KLNP+S Y+ RA + +R KP AAI D ++AI N Sbjct: 124 VSDGRLEDAIGLFTEAIKLNPHSGLLYAKRASVFIRLQKPNAAIRDCDKAILLN 177
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A6L7TSX6_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7TSX6_9CHLR) HSP 1 Score: 51.6 bits (122), Expect = 6.650e-6 Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 1 Query: 49 GFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAITR 219 G + Q G L+EA+ +T AL+L+P AYSNR + +PE AIAD ++AI+R Sbjct: 35 GVRQQQRGNLEEAVRAYTEALRLDPEMAPAYSNRGSAYLNIGRPELAIADADEAISR 91
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A2G8LHX7_STIJA (Putative hsc70-interacting protein-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LHX7_STIJA) HSP 1 Score: 50.8 bits (120), Expect = 1.450e-5 Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 61 MQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQA 210 M +G L+EA+G FT A+K+NP+S Y+ RA + ++ KP AAI D ++A Sbjct: 82 MSDGNLEEAVGLFTDAIKINPHSALLYAKRASIYIKQKKPNAAIRDCDRA 131
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A6P9BR04_PANGU (centrosome-associated protein CEP250-like n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9BR04_PANGU) HSP 1 Score: 50.1 bits (118), Expect = 2.890e-5 Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 40 NNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEAAIADLNQAITRN 222 N + + ELQ+A+ F+ A+++NPN S+Y+NRA + ++ KP AAI D N AI N Sbjct: 98 NKKALDALAKVELQKAVDLFSEAIEVNPNISSSYTNRANVYMQLQKPNAAIKDCNMAIELN 158
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A2A4NNC4_9HYPH (GlcNAc transferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A4NNC4_9HYPH) HSP 1 Score: 48.9 bits (115), Expect = 6.370e-5 Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 1 QAVTLNPRFSDGYNNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPEA 186 Q VT NP ++ +N RG + G EAL DF+ A++L+P AY+NRA + + +KP A Sbjct: 49 QVVTRNPGSAEAFNVRGAAYGRAGLTNEALRDFSTAIRLDPQYFQAYANRALINRQTNKPAA 110
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: UPI00141FCE09 (tetratricopeptide repeat protein n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI00141FCE09) HSP 1 Score: 48.9 bits (115), Expect = 7.150e-5 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 7 VTLNPRFSDGYNNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAEL 159 + NP+F + YNNRGFT++ G+ A DF AL L+P+++ +N A L Sbjct: 569 LRANPKFEEAYNNRGFTRVLQGDATGAEADFKAALALDPDAVMPLANLASL 619
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Match: A0A836VJ05_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A836VJ05_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 9.400e-5 Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 1 QAVTLNPRFSDGYNNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRAELLVRADKPE 183 + +++NP + G+N+ G MQ ++ ALG+F +A++L+P+ +AY+N A LL + KP+ Sbjct: 115 RGLSINPLSAVGHNSLGAVLMQGPQVLGALGEFKVAIQLDPDLRAAYTNLARLLFKHVKPD 175 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87112.20259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87112.20259.1 >prot_M-pyrifera_M_contig87112.20259.1 ID=prot_M-pyrifera_M_contig87112.20259.1|Name=mRNA_M-pyrifera_M_contig87112.20259.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp QAVTLNPRFSDGYNNRGFTKMQNGELQEALGDFTIALKLNPNSISAYSNRback to top mRNA from alignment at M-pyrifera_M_contig87112:8..229+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87112.20259.1 ID=mRNA_M-pyrifera_M_contig87112.20259.1|Name=mRNA_M-pyrifera_M_contig87112.20259.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=222bp|location=Sequence derived from alignment at M-pyrifera_M_contig87112:8..229+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87112:8..229+ >mRNA_M-pyrifera_M_contig87112.20259.1 ID=mRNA_M-pyrifera_M_contig87112.20259.1|Name=mRNA_M-pyrifera_M_contig87112.20259.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig87112:8..229+ (Macrocystis pyrifera P11B4 male)back to top |