mRNA_M-pyrifera_M_contig871.20254.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig871.20254.1
Unique NamemRNA_M-pyrifera_M_contig871.20254.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: D7FPY9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 2.030e-144
Identity = 285/516 (55.23%), Postives = 319/516 (61.82%), Query Frame = 1
Query:    4 IGPASAFSQALHMALTFVVLVLVAFAKADDGAACTAT-YGNNAGF---GGSSXXXXXXXXXPTRPSDPNSXXXXXXXXXXXXXXXXXXXXSSRKLSGRGXXXXXXXXGRGMSSSPAVRRLRAAWSKLWHVVEDDLATRWKAASRXXXXXXXXXXXXXVPPPHAEADVLAEALASPPRYSRGDAGSA---------------GAGS---------------GSKTARRRSERGARAGALLQADSPPGR---RPVGLNCLHLLRLCGHRTLVGAGGGGRRGSSRSPKFLLLLDLDETLVHCSPRPMETARRRG--RRGGVGSSGRALRPDLTVEMRGGAPSD-RPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSG-GSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRPSAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 1428
            IGP S  SQALHMAL FVVLVLVA AKADD  A  AT Y   A +   G +S         P R     +                      R  S  G        G G+ S+P VR LRAAWS LWH VEDDLATRW+AA R    XXXXXXXXXVPPPHAEAD+LA ALASPPRY  G AG                 G GS               G +T+  R  RGA       + S  G    RPVGLNCL+ L LCG+R      GGG+   SR PKFLLLLDLDETLVHCSP  M+  RR G            A RPDL +EMRG APSD RP+CMNAWKRPHLDVFLGVVSRWY+VAVFTSGRQC+AEPLIDLIDS+CVI KRFYRDSCV+R+   ++P D GR+  G+     AT       GA    S ++KDL+VV SEHFPLRTVLVDN+P  VVQQANVLPV+SW+ +D++DRQLLDLLPVLLALTSCQDVRSVL LRPG
Sbjct:   11 IGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGASYSCSGSNSGSSGAPGSTPARRKGSRTGGGSGSVDSSQRSSGSGPVKRRRIASSSGKEKIGRRRGGGVLSAPVVRHLRAAWSSLWHAVEDDLATRWRAAGRVLTRXXXXXXXXXVPPPHAEADILAGALASPPRYPHGAAGRXXXXXXXXXXXXXXXXGVGSVXXXXXXXXXXXXXXGGRTSGSRGGRGALGATDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRP-----GGGK--GSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDG--AAPPDTGRTARGATGVPTATA----EAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPG 513          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A6H5JWM9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 3.900e-139
Identity = 297/515 (57.67%), Postives = 328/515 (63.69%), Query Frame = 1
Query:    4 IGPASAFSQALHMALTFVVLVLVAFAKADDGAACTAT-YGNNAGFGGS---SXXXXXXXXXPTRPSDPNSXXXXXXXXXXXXXXXXXXXXSSRKLSGRGXXXXXXXXGRGMSSSPAVRRLRAAWSKLWHVVEDDLATRWKAASRXXXXXXXXXXXXXVPPPHAEADVLAEALASPPRYSRGDAGSAGAG--------------------------------SGSKTARRRSERGARAGALLQADSPPGR---RPVGLNCLHLLRLCGHRTLVGAGGGGRRGSSRSPKFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSD-RPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRPSAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 1428
            IGP S  SQALHMAL FVVLVLVA AKADD  A  AT Y   AG+ GS   S         P R     +XXXXXXXXXXXXXX        R  S           G G+ +SP  R LRAAWS LWH VEDDLATRW+AA R   XXXXXXXXXXVPPPHAEAD+LA ALASPP Y  G  G                                     SG +T+  R  RGA         S  G    RPVGLNCL+ L LCG+R      GGGR   SR PKFLLLLDLDETLVHCSP  M+  RR G  GG G    A RPDL +EMRG APSD RP+CM+AWKRPHLDVFLGVVSRWY+VAVFTSGRQC+AEPLIDLIDS+CVI KRFYRDSCV+R+   ++P D GR+           V     GA    S ++KDL+VV SEHFPLRTVLVDN+P  VVQQANVLPV+SW+ +D++DRQLLDLLPVLLALTSCQDVRSVL LRPG
Sbjct:  312 IGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTXXXXXXXXXXXXXXGAGPVKRRRIASXXXKGKIGRRRGGGVLTSPVARHLRAAWSSLWHAVEDDLATRWRAAGRVLMXXXXXXXXXXVPPPHAEADILAGALASPPCYPHGATGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSGARGGRGALGATDGSGPSEKGLHLGRPVGLNCLNFLSLCGYRP-----GGGR--GSRQPKFLLLLDLDETLVHCSPHVMQPPRRHGG-GGRG----APRPDLKLEMRGRAPSDNRPSCMDAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDG--AAPPDTGRT---ARGATGVPVATAEAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPG 809          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A7S2SLU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLU2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.900e-36
Identity = 92/235 (39.15%), Postives = 121/235 (51.49%), Query Frame = 1
Query:  736 RSPKFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEM-RGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLE-VVRSEHFPLRTVLVDNRPSAVVQQA--NVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLRPG 1428
            R  K  L+LDLDETLVH SP P E  R  G        G AL  D+ + + R    S  P  +  WKRPHLDVFL  VS+ Y++ +FT+G+Q YA P+ID++D QCV+ +RF+RD C                         T +  G+           KDL  VVR EH P R +L+DN P A       N +P+  +Y  D  D +LL L+P LL L++  DVR+VL  R G
Sbjct:   91 RKQKMTLVLDLDETLVHSSPDPYEPLRAHG--------GVALPFDVHLSLPRDDKGSGTPKSIFCWKRPHLDVFLHEVSKVYEIVIFTAGQQRYASPVIDILDDQCVVDRRFFRDKC-------------------------TYMSGGK---------YTKDLSRVVRQEHLPHRAILIDNSPVAYESTCPENAIPIPPYYGNDPSDLELLHLIPFLLMLSTVDDVRTVLSKRRG 283          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A6U2GHI8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2GHI8_HEMAN)

HSP 1 Score: 125 bits (315), Expect = 1.820e-29
Identity = 85/231 (36.80%), Postives = 116/231 (50.22%), Query Frame = 1
Query:  745 KFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAW----KRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRPSAV-VQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            K  L+LDLDETLVH SP+                  R  R D  + +   A +D P  +  W    KRPH+D FL  VSRW+++ VFT+  Q YA+P+IDLID   ++ +RF+R  CV+R  N                                    +KDL  VR +    + V+VDN P+A  + +AN LP+E+W+  D  D+ LLDLLPVL  L+   DVRS+L LR
Sbjct:   57 KMTLVLDLDETLVHSSPK------------------RLFRYDYKIHI---ATADSP--VGCWFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPDGLVCRRFFRTGCVERNGN-----------------------------------LVKDLSNVRGDLS--QVVIVDNSPTAYSLHEANALPIETWH-DDPTDQALLDLLPVLSGLSLLNDVRSILSLR 226          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A7S0YYX4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYX4_9CRYP)

HSP 1 Score: 124 bits (312), Expect = 2.400e-29
Identity = 84/227 (37.00%), Postives = 110/227 (48.46%), Query Frame = 1
Query:  745 KFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRPSAV-VQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            K  L+LDLDETLVH SP+                  R  R D  + +   A S    C    KRPH+D FL  VSRW+++ VFT+  Q YA+P+IDLID + ++ +RF+R SCV R  N                                    +KDL  VR +    + V+VDN P+A  + + N LP+E+W   D  D  LLDLLPVL  L    DVRS+L LR
Sbjct:   54 KMTLVLDLDETLVHSSPK------------------RLFRHDYKIHI-STADSPMGCCFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPERLVCRRFFRGSCVDRNGN-----------------------------------LVKDLSNVRRDLS--QVVIVDNSPTAYSLHEDNALPIETWL-DDPADEALLDLLPVLSGLALLNDVRSILSLR 223          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A8H5I236_9AGAR (FCP1 homology domain-containing protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5I236_9AGAR)

HSP 1 Score: 117 bits (294), Expect = 8.120e-26
Identity = 85/225 (37.78%), Postives = 113/225 (50.22%), Query Frame = 1
Query:  754 LLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDS-QCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRP-SAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            L+LDLDETL+H + RP+ +A   G  G +GS  R   P   VE+  G    R    + +KRP +D FL  VS WY + +FT+  Q YA+P+ID +D+ + ++  R +RDSC Q  + S S                                  KDL +V  +    R  LVDN P S  V +AN +P+E W   D  D  LLDLLPVL +L    DVR VLGLR
Sbjct:  147 LVLDLDETLIHSTSRPISSANSSGLFGSLGS--RKGGPGHVVEVMLGG---RSTLYHVYKRPFVDFFLRTVSSWYTLVIFTASMQEYADPVIDWLDAGRGILEHRLFRDSCTQLPNGSYS----------------------------------KDLSIVEPDLA--RVCLVDNSPVSYKVNEANGIPIEGW-THDPYDEALLDLLPVLDSLRFTSDVRRVLGLR 329          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A067NZ82_PLEOS (FCP1 homology domain-containing protein n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067NZ82_PLEOS)

HSP 1 Score: 112 bits (281), Expect = 2.760e-25
Identity = 84/235 (35.74%), Postives = 112/235 (47.66%), Query Frame = 1
Query:  724 RGSSRSPKFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDS-QCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRP-SAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            R   R P+  L+LDLDETL+H + RPM  +   G  G  G   R   P  TVE+  G    +    + +KRP  D FL  VS WY + +FT+  Q YA+P+ID +D+ + ++ +R +RDSC Q  S                                   T  KDL VV  +       L+DN P S  + +AN +P+E W   D  D  LLDLLPVL +L    DVR VL LR
Sbjct:    4 RKPQRVPRKTLVLDLDETLIHSTSRPMPMS---GSSGFFGFGRRNNGPGHTVEVILGG---KRTVYHVYKRPFADFFLRTVSSWYTLVIFTASMQEYADPVIDWLDAGRGILGRRLFRDSCTQLPSG----------------------------------TYTKDLAVVEQDLS--NVCLIDNSPISYRINEANGIPIEGW-TNDPADEALLDLLPVLDSLRFTNDVRRVLSLR 195          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A0C2XLX4_AMAMK (FCP1 homology domain-containing protein n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2XLX4_AMAMK)

HSP 1 Score: 116 bits (290), Expect = 4.830e-25
Identity = 81/225 (36.00%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  754 LLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDS-QCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRP-SAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            L+LDLDETL+H + RPM ++   G  G VG    +    + V ++     D+    + +KRP +D FL  VS WY + +FT+  Q YA+P+ID +D+ + ++ +RF+RDSC Q  + S +                                  KDL ++ S+    R  LVDN P S  V +AN +P+E W   D  D  LLDLLPVL +L    DVR VLGLR
Sbjct:  180 LVLDLDETLIHSTSRPMYSSSSGGLFGLVGKRNSSAGHTVEVVLQ-----DKSTLYHVYKRPFVDFFLRTVSGWYTLVIFTASMQEYADPVIDWLDAGRGILVQRFFRDSCTQLPNGSYT----------------------------------KDLSIIDSDLS--RVCLVDNSPISYRVNEANGIPIEGW-THDPSDEALLDLLPVLDSLRFTSDVRRVLGLR 362          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: A0A2A9NEM2_9AGAR (FCP1 homology domain-containing protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NEM2_9AGAR)

HSP 1 Score: 117 bits (292), Expect = 5.990e-25
Identity = 86/236 (36.44%), Postives = 116/236 (49.15%), Query Frame = 1
Query:  721 RRGSSRSPKFLLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDS-QCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRP-SAVVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            R+ +   PK L+L DLDETL+H + RPM T    G  G +    R       VE+       +    + +KRP +D FL  VS WY + +FT+  Q YA+P+ID +D+ + ++ +RF+RDSC Q  + S +                                  KDL VV S+    R  LVDN P S  V +AN +P+E W   D  D  LLDLLPVL +L    DVR VLGLR
Sbjct:  225 RKSAFHKPKTLVL-DLDETLIHSTSRPMSTYSSGGLFGLISFGRRNASAGHMVEV---VLQGKSTLYHVYKRPFVDFFLRTVSSWYTLVIFTASMQEYADPVIDWLDAGRGILVQRFFRDSCTQLPNGSYT----------------------------------KDLSVVESDLS--RVCLVDNSPISYHVNEANGIPIEGW-THDPSDEALLDLLPVLDSLRFTSDVRRVLGLR 419          
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Match: M2W254_GALSU (Phosphatase isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W254_GALSU)

HSP 1 Score: 115 bits (287), Expect = 1.000e-24
Identity = 78/224 (34.82%), Postives = 116/224 (51.79%), Query Frame = 1
Query:  754 LLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAPSDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQCVIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAXXXATVVGDGRGGAAGVPSTTMKDLEVVRSEHFPLRTVLVDNRPSA-VVQQANVLPVESWYAQDSQDRQLLDLLPVLLALTSCQDVRSVLGLR 1422
            L+LDLDETLVH + R               +S   +R +++V+       + P+     KRP+LDVFL VVS+WYD+ V+T+  Q YA+PLID +D   VIR+R++RD C+Q                                   V +  +KD+ ++  +   +  V+VDN PSA V+ + N +P+ +W+  D  D +LL+LLP L AL    DVRS+L LR
Sbjct:  173 LVLDLDETLVHSTTRQ--------------NSHFDIRLEVSVD-------NCPSIFYVNKRPYLDVFLRVVSQWYDLVVYTASLQKYADPLIDALDVHGVIRERYFRDHCIQ-----------------------------------VGNNFVKDISIIEPDLRKI--VIVDNSPSAYVLHEENAIPIGTWW-DDPLDEELLNLLPFLQALCVLADVRSILSLR 337          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig871.20254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY9_ECTSI2.030e-14455.23FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JWM9_9PHAE3.900e-13957.67FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A7S2SLU2_9STRA4.900e-3639.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U2GHI8_HEMAN1.820e-2936.80Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0YYX4_9CRYP2.400e-2937.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8H5I236_9AGAR8.120e-2637.78FCP1 homology domain-containing protein n=1 Tax=Gy... [more]
A0A067NZ82_PLEOS2.760e-2535.74FCP1 homology domain-containing protein n=2 Tax=Pl... [more]
A0A0C2XLX4_AMAMK4.830e-2536.00FCP1 homology domain-containing protein n=1 Tax=Am... [more]
A0A2A9NEM2_9AGAR5.990e-2536.44FCP1 homology domain-containing protein n=1 Tax=Am... [more]
M2W254_GALSU1.000e-2434.82Phosphatase isoform 2 n=2 Tax=Galdieria sulphurari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig871contigM-pyrifera_M_contig871:27417..29775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score435.3
Seed ortholog evalue3.8e-119
Seed eggNOG ortholog2880.D7FPY9
KEGG koko:K15731
Hectar predicted targeting categorychloroplast
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
EC3.1.3.16
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Exons4
Model size1428
Cds size1428
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig871.20254.1prot_M-pyrifera_M_contig871.20254.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig871 27417..29775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816780.5507057-CDS-M-pyrifera_M_contig871:27416..276851622816780.5507057-CDS-M-pyrifera_M_contig871:27416..27685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 27417..27685 +
1692278174.3735204-CDS-M-pyrifera_M_contig871:27416..276851692278174.3735204-CDS-M-pyrifera_M_contig871:27416..27685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 27417..27685 +
1622816780.5658789-CDS-M-pyrifera_M_contig871:27754..285051622816780.5658789-CDS-M-pyrifera_M_contig871:27754..28505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 27755..28505 +
1692278174.3947456-CDS-M-pyrifera_M_contig871:27754..285051692278174.3947456-CDS-M-pyrifera_M_contig871:27754..28505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 27755..28505 +
1622816780.5785537-CDS-M-pyrifera_M_contig871:29319..294761622816780.5785537-CDS-M-pyrifera_M_contig871:29319..29476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 29320..29476 +
1692278174.4043765-CDS-M-pyrifera_M_contig871:29319..294761692278174.4043765-CDS-M-pyrifera_M_contig871:29319..29476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 29320..29476 +
1622816780.5903814-CDS-M-pyrifera_M_contig871:29524..297751622816780.5903814-CDS-M-pyrifera_M_contig871:29524..29775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 29525..29775 +
1692278174.4139996-CDS-M-pyrifera_M_contig871:29524..297751692278174.4139996-CDS-M-pyrifera_M_contig871:29524..29775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig871 29525..29775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig871.20254.1

>prot_M-pyrifera_M_contig871.20254.1 ID=prot_M-pyrifera_M_contig871.20254.1|Name=mRNA_M-pyrifera_M_contig871.20254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=476bp
VIGPASAFSQALHMALTFVVLVLVAFAKADDGAACTATYGNNAGFGGSSG
GGSGTGSGPTRPSDPNSSSSLASPTTSSSSSSSGRQASSRKLSGRGGRGG
RGGAGRGMSSSPAVRRLRAAWSKLWHVVEDDLATRWKAASRALASLREAW
AALWVPPPHAEADVLAEALASPPRYSRGDAGSAGAGSGSKTARRRSERGA
RAGALLQADSPPGRRPVGLNCLHLLRLCGHRTLVGAGGGGRRGSSRSPKF
LLLLDLDETLVHCSPRPMETARRRGRRGGVGSSGRALRPDLTVEMRGGAP
SDRPACMNAWKRPHLDVFLGVVSRWYDVAVFTSGRQCYAEPLIDLIDSQC
VIRKRFYRDSCVQRESNSSSPRDGGRSGGSLAAAAATVVGDGRGGAAGVP
STTMKDLEVVRSEHFPLRTVLVDNRPSAVVQQANVLPVESWYAQDSQDRQ
LLDLLPVLLALTSCQDVRSVLGLRPG
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mRNA from alignment at M-pyrifera_M_contig871:27417..29775+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig871.20254.1 ID=mRNA_M-pyrifera_M_contig871.20254.1|Name=mRNA_M-pyrifera_M_contig871.20254.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2359bp|location=Sequence derived from alignment at M-pyrifera_M_contig871:27417..29775+ (Macrocystis pyrifera P11B4 male)
GTGATCGGCCCCGCGTCTGCTTTTTCGCAGGCGCTTCACATGGCCCTGAC GTTTGTTGTCCTCGTTCTCGTCGCCTTTGCGAAGGCTGACGACGGCGCGG CCTGCACCGCAACGTACGGCAATAACGCGGGCTTCGGCGGCAGCAGCGGC GGCGGCAGCGGCACTGGTTCGGGCCCAACACGCCCCTCCGATCCCAACTC CTCCTCCTCCCTCGCCTCCCCCACCACCTCCTCCTCCTCCTCCTCCTCAG GAAGACAAGCGTCGTCGAGGTCTAGTGCCGGAGCTGATGGCGACGGCCTC CACCGCAGCGGGAAACCCCGAAAATTAAAGCAGCGCAGAAAATTATCCGG CCGCGGCGGCCGCGGCGGCCGCGGCGGGGCAGGCCGAGGAATGTCGTCCT CGCCCGCCGTACGCCGCCTCAGGGCGGCGTGGTCGAAACTCTGGCACGTC GTAGAGGACGACCTGGCAACGCGGTGGAAGGCGGCGAGCCGGGCGCTCGC TTCGCTCCGCGAGGCCTGGGCCGCTCTCTGGGTGCCCCCGCCCCACGCGG AGGCCGACGTTCTCGCCGAAGCGCTGGCGTCGCCGCCGCGGTACTCTCGG GGCGACGCCGGCTCCGCTGGCGCCGGGTCCGGGTCCAAGACGGCCCGGCG GAGATCGGAACGCGGCGCTCGTGCCGGGGCGCTGCTGCAGGCAGACAGCC CGCCGGGGCGACGACCGGTGGGACTGAACTGCCTGCACCTGCTGAGGCTG TGCGGACACCGTACTCTTGTCGGAGCGGGCGGCGGGGGTCGGAGGGGTTC CAGCCGGTCTCCCAAGTTTCTTCTCTTGCTTGACCTTGATGAGACGCTGG TCCACTGTAGCCCGCGCCCGATGGAAACCGCGCGGAGGCGTGGCAGAAGG GGGGGGGTGGGCTCTTCGGGCCGGGCACTGCGACCCGACCTGACGGTGGA AATGAGGGGTGGCGCTCCGTCGGACCGACCGGCGTGCATGAACGCCTGGA AGCGGCCGCACTTGGACGTCTTCCTCGGCGTTGTGAGCAGATGGTACGAT GTGGCGGTGTTCACCTCGGGTCGTCAGTGCTATGCGGAGGTGAGGGGGTG TGGGTTGTTTTTTTCAGTACCGCCGTGCATAGGTTTGGTGTGTTGGGGGT TGTATGCGGGAGGGAGGGTCGGGGGAGGGAGGGCGGAGGGGTTATCGTAG ACCCTGCGCGCGCCGTGTGTTGGTTTTTCATTGATGCGATTATAACTCAC TCTTGATACTGAGGGATGGGGTGGGAGATATATCCGCCAAAGGTAGCTGT TGTGAGCCTAGCTGAACGAGTCTTGGAGGAGATGGAGGTTTTGGGCGCAT GCTCTAATATATACCTTCAGACATAAGATTTATCTTGTATTCGTCGGGTT CCTTTTTCGTTCGTTGCCGTGCTCGCAGAGACGGCCCGGCCGAACAAGTG ACGCCCCCCCCCCCCGGGCTGTGCCGTCCTTCTTGCCTCACCGAACACGC GTGTACGAGTAGCCCAGGGGGCCGACTCTTGATCAGGAGACAGGAGCAGC AGCAGTGTCGACCCCGACCGAGACGAGGGCAGCGAGATCGCAGCAGTCTG ATCGTCCTCCTACTCGTACTCAAAGTCGTACATCGTGGTCTCTTGCTTGA TTTTTTTTCGAGCGAAAAATGGTAGTTTCTAATTTTCACCTCGCCAACGG CGGCTTTGACGACCGCCACCCGAGATTCATCTAATACACAGTTATCGAAA TTCTCGGTCAACGCACTCAAGTTGACGACAGCTTCGAACATCCTGCTGCC CGAGTCGGCAGCTGCGCGTAATTGTTTATGGCCTCACCACCGACCGACCC TTCCGCCTCGCCCTCGGGCGCTGTCGTCTCCTCCGTACGCCCTCCTCCGC CAGCCCCTAATCGACCTCATAGACTCGCAATGCGTAATCCGCAAGCGCTT CTATCGCGACAGCTGCGTTCAGCGGGAGAGCAACAGCAGCAGCCCTCGGG ATGGTGGCAGAAGCGGGGGCTCACTGGCCGCCGCCGCTGCCACGGTTGTT GGCGACGGCCGTTCGTCAGCGGGAACGGCAACAGCGGTGAGATGGAGGGC GGGCAGAGGGGGGGGGGCGGCGGGCGTCCCGTCGACGACGATGAAAGACC TCGAAGTAGTGAGGTCGGAGCATTTCCCTCTCCGCACGGTGCTCGTCGAC AACCGCCCCAGCGCGGTGGTCCAGCAGGCCAATGTGCTTCCGGTGGAGTC GTGGTATGCGCAGGACTCGCAGGACCGGCAGCTGCTGGACCTCCTTCCGG TGCTCCTGGCGCTCACGTCGTGCCAGGACGTGCGCAGTGTGCTGGGGCTG AGGCCAGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig871:27417..29775+

>mRNA_M-pyrifera_M_contig871.20254.1 ID=mRNA_M-pyrifera_M_contig871.20254.1|Name=mRNA_M-pyrifera_M_contig871.20254.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2856bp|location=Sequence derived from alignment at M-pyrifera_M_contig871:27417..29775+ (Macrocystis pyrifera P11B4 male)
GTGATCGGCCCCGCGTCTGCTTTTTCGCAGGCGCTTCACATGGCCCTGAC
GTTTGTTGTCCTCGTTCTCGTCGCCTTTGCGAAGGCTGACGACGGCGCGG
CCTGCACCGCAACGTACGGCAATAACGCGGGCTTCGGCGGCAGCAGCGGC
GGCGGCAGCGGCACTGGTTCGGGCCCAACACGCCCCTCCGATCCCAACTC
CTCCTCCTCCCTCGCCTCCCCCACCACCTCCTCCTCCTCCTCCTCCTCAG
GAAGACAAGCGTCGTCGAGGTGATCGGCCCCGCGTCTGCTTTTTCGCAGG
CGCTTCACATGGCCCTGACGTTTGTTGTCCTCGTTCTCGTCGCCTTTGCG
AAGGCTGACGACGGCGCGGCCTGCACCGCAACGTACGGCAATAACGCGGG
CTTCGGCGGCAGCAGCGGCGGCGGCAGCGGCACTGGTTCGGGCCCAACAC
GCCCCTCCGATCCCAACTCCTCCTCCTCCCTCGCCTCCCCCACCACCTCC
TCCTCCTCCTCCTCCTCAGGAAGACAAGCGTCGTCGAGAAAATTATCCGG
CCGCGGCGGCCGCGGCGGCCGCGGCGGGGCAGGCCGAGGAATGTCGTCCT
CGCCCGCCGTACGCCGCCTCAGGGCGGCGTGGTCGAAACTCTGGCACGTC
GTAGAGGACGACCTGGCAACGCGGTGGAAGGCGGCGAGCCGGGCGCTCGC
TTCGCTCCGCGAGGCCTGGGCCGCTCTCTGGGTGCCCCCGCCCCACGCGG
AGGCCGACGTTCTCGCCGAAGCGCTGGCGTCGCCGCCGCGGTACTCTCGG
GGCGACGCCGGCTCCGCTGGCGCCGGGTCCGGGTCCAAGACGGCCCGGCG
GAGATCGGAACGCGGCGCTCGTGCCGGGGCGCTGCTGCAGGCAGACAGCC
CGCCGGGGCGACGACCGGTGGGACTGAACTGCCTGCACCTGCTGAGGCTG
TGCGGACACCGTACTCTTGTCGGAGCGGGCGGCGGGGGTCGGAGGGGTTC
CAGCCGGTCTCCCAAGTTTCTTCTCTTGCTTGACCTTGATGAGACGCTGG
TCCACTGTAGCCCGCGCCCGATGGAAACCGCGCGGAGGCGTGGCAGAAGG
GGGGGGGTGGGCTCTTCGGGCCGGGCACTGCGACCCGACCTGACGGTGGA
AATGAGGGGTGGCGCTCCGTCGGACCGACCGGCGTGCATGAACGCCTGGA
AGCGGCCGCACTTGGACGTCTTCCTCGGCGTTGTGAGCAGATGGTACGAT
GTGGCGGTGTTCACCTCGGGTCGTCAGTGCTATGCGGAGAAAATTATCCG
GCCGCGGCGGCCGCGGCGGCCGCGGCGGGGCAGGCCGAGGAATGTCGTCC
TCGCCCGCCGTACGCCGCCTCAGGGCGGCGTGGTCGAAACTCTGGCACGT
CGTAGAGGACGACCTGGCAACGCGGTGGAAGGCGGCGAGCCGGGCGCTCG
CTTCGCTCCGCGAGGCCTGGGCCGCTCTCTGGGTGCCCCCGCCCCACGCG
GAGGCCGACGTTCTCGCCGAAGCGCTGGCGTCGCCGCCGCGGTACTCTCG
GGGCGACGCCGGCTCCGCTGGCGCCGGGTCCGGGTCCAAGACGGCCCGGC
GGAGATCGGAACGCGGCGCTCGTGCCGGGGCGCTGCTGCAGGCAGACAGC
CCGCCGGGGCGACGACCGGTGGGACTGAACTGCCTGCACCTGCTGAGGCT
GTGCGGACACCGTACTCTTGTCGGAGCGGGCGGCGGGGGTCGGAGGGGTT
CCAGCCGGTCTCCCAAGTTTCTTCTCTTGCTTGACCTTGATGAGACGCTG
GTCCACTGTAGCCCGCGCCCGATGGAAACCGCGCGGAGGCGTGGCAGAAG
GGGGGGGGTGGGCTCTTCGGGCCGGGCACTGCGACCCGACCTGACGGTGG
AAATGAGGGGTGGCGCTCCGTCGGACCGACCGGCGTGCATGAACGCCTGG
AAGCGGCCGCACTTGGACGTCTTCCTCGGCGTTGTGAGCAGATGGTACGA
TGTGGCGGTGTTCACCTCGGGTCGTCAGTGCTATGCGGAGCCCCTAATCG
ACCTCATAGACTCGCAATGCGTAATCCGCAAGCGCTTCTATCGCGACAGC
TGCGTTCAGCGGGAGAGCAACAGCAGCAGCCCTCGGGATGGTGGCAGAAG
CGGGGGCTCACTGGCCGCCGCCGCTGCCACGGTTGTTGGCGACGGCCCCC
CTAATCGACCTCATAGACTCGCAATGCGTAATCCGCAAGCGCTTCTATCG
CGACAGCTGCGTTCAGCGGGAGAGCAACAGCAGCAGCCCTCGGGATGGTG
GCAGAAGCGGGGGCTCACTGGCCGCCGCCGCTGCCACGGTTGTTGGCGAC
GGCCGGGGGGGGGCGGCGGGCGTCCCGTCGACGACGATGAAAGACCTCGA
AGTAGTGAGGTCGGAGCATTTCCCTCTCCGCACGGTGCTCGTCGACAACC
GCCCCAGCGCGGTGGTCCAGCAGGCCAATGTGCTTCCGGTGGAGTCGTGG
TATGCGCAGGACTCGCAGGACCGGCAGCTGCTGGACCTCCTTCCGGTGCT
CCTGGCGCTCACGTCGTGCCAGGACGTGCGCAGTGTGCTGGGGCTGAGGC
CAGGGGGGGGGGGGCGGCGGGCGTCCCGTCGACGACGATGAAAGACCTCG
AAGTAGTGAGGTCGGAGCATTTCCCTCTCCGCACGGTGCTCGTCGACAAC
CGCCCCAGCGCGGTGGTCCAGCAGGCCAATGTGCTTCCGGTGGAGTCGTG
GTATGCGCAGGACTCGCAGGACCGGCAGCTGCTGGACCTCCTTCCGGTGC
TCCTGGCGCTCACGTCGTGCCAGGACGTGCGCAGTGTGCTGGGGCTGAGG
CCAGGG
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