mRNA_M-pyrifera_M_contig8707.20245.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8707.20245.1
Unique NamemRNA_M-pyrifera_M_contig8707.20245.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 7.260e-152
Identity = 208/274 (75.91%), Postives = 233/274 (85.04%), Query Frame = 1
Query:    1 GVSAKHFSASPQDRSKPFLHNTVYENDFRDFCAEADQLEGG-----GE---QNVFKREFDRLDAGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKTGMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSGAAALGLIL 798
            GVSAKHFSA PQDRSKPFLH+++YE+DFR+F  E D L+GG     GE   +N FKREFDRLDAGNGVV IRDMP+LI+G LGRD RPWI DRILKMFEA RDGK++WLDLQDGLRK   + RSDV Y+ER++PEWLV NRKV PA+THG+ TESC+QMD+GKDGEIP  RRIWYKTGMSSTTLDLF+GTTK TYQVPGYGGFIPASK N R REH DM+N R   LDLRLFYRHN PGYTGHAP+AACNDPG +RCGS+ LTTSGAAALG+IL
Sbjct:   41 GVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.540e-58
Identity = 112/295 (37.97%), Postives = 161/295 (54.58%), Query Frame = 1
Query:   22 SASPQDRSKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRLDAGNGV-----------------------------------VLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVS-ATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKTGMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSGAAALGLIL 798
            +A+   R+KPFLH+T+++  +RD   E   +EG    +V       L A   V                                   + +  +P L+     +  R W+ DR+ K  E +R G++ W      L + +S A++   L     +PEW++ +RK  P I HGK+  SC+Q D+G  G  P+ R++ +K GM  TT DLF+GTTKDT+ VPGYGGFIPASK N+R  +H DM++ R  + +LRLF++HN  GYTGH   AACND G+  CG++  TTSGAAALGL+L
Sbjct:   93 AAAAVARTKPFLHSTLHKESYRDINQE---IEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.330e-40
Identity = 95/262 (36.26%), Postives = 132/262 (50.38%), Query Frame = 1
Query:    1 GVSAKHFSASPQDRSKPFLHNTVYENDFRDFCAEADQLEGGGEQNV-FKREFDRLDAGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKTGMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSGAAA 783
            GVSA  F  S +   K F+ +TVY +DF D  A+  +L+        F++ F     G G +    +P++++ ALG      IK +    F  +R G +SW D +  L + + A   +       VPEWLV + K  P +  G   +SC+Q D+G   E P  +   YK GM ST+ DL  GTTKDTY +PGY GFIP S++NS      + +  R     +    +    GYTGH PS   ND G   CG N LTT+GA A
Sbjct:   74 GVSAL-FEESNKALPKRFMGSTVYRSDFIDLRADLVKLQDACRSPAAFQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPIPKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGA 333          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A6G0XRS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRS2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.950e-32
Identity = 84/253 (33.20%), Postives = 125/253 (49.41%), Query Frame = 1
Query:   43 SKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRL------DAGNGVVLIR--DMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            S+ FL  ++Y+ DF +F  E  ++        F+  FD L      ++ + V  I   D+  L++   G+     I +    MF+   DG ++W   Q+   +  S      +        W+ F +KV P  T      S HQ+D G  G  P  R    ++ GM+STT DLFDG+TK +Y +P Y GFIP +K N       +   PRPKA DLRL++ +N PGYTGH P  + N  G+A+ G +  TT+G
Sbjct:   85 SRTFLGQSLYQRDFANFHEEGKRI-AELSMEAFQAAFDSLAEEPNQESPDAVKKINRDDVGELLQAVYGKPPATRILEIYAHMFDVCPDGFVTWEVFQEATLRLSSFLLHQTIKPSSHSIGWVDFVKKVLPNGT----PSSSHQIDYGTYGSDPLARPYMNRSHGMASTTSDLFDGSTKASYHIPRYQGFIPHTKCNPTAVSQGECEKPRPKAEDLRLYHSNNIPGYTGHKPVDSKNVRGEAKTGCDVRTTNG 332          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A485KW59_9STRA (Aste57867_12656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW59_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.540e-30
Identity = 83/251 (33.07%), Postives = 124/251 (49.40%), Query Frame = 1
Query:   43 SKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRL------DAGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            S+ FL  ++Y++DF +F  +  ++        ++  FD L      + G+  +   D+  L+    G+     + D    MF+   DG +SW   Q+ + +  S    + +        WL F + V P  T      S HQ+D G  G  P  R    +T GM+STT DLFDGTTK T+ +P Y GFIP +K N       D    R KA DLRL++ +N PGYTGH P  + N  G+A+ G++  TT+G
Sbjct:   86 SRTFLGQSLYQSDFLNFQDQGRRI-AEIPLEAYEAAFDDLAQGTNQEGGSKKIARDDVKHLLRKVYGKAPTSRVLDIYTHMFDTCPDGFVSWEIFQEAVLRLSSFLLHETVKTTPGQAGWLDFVQHVIPNGT----PSSSHQVDFGVYGSEPIGRPYVSRTHGMASTTSDLFDGTTKATFHIPRYQGFIPQTKFNPTAVVQGDAERGRTKAEDLRLYHLNNVPGYTGHKPVDSKNVRGEAKTGTDIRTTNG 331          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.960e-30
Identity = 86/249 (34.54%), Postives = 124/249 (49.80%), Query Frame = 1
Query:   46 KPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRLDAGNGVV--LIRDMPR-LIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFN--RKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            K FL  ++YE DF  F  +   L     +  +KR FD L    G    L RD+ + L+    G      + D    MF+   DG I+W   ++ L + ++   S+   +    P W+ +   R++ P    G    S HQ+D G  G  P  R    +T GM+STT DL DGTTK+T+ +P YGGF+P +  N       D   PR K  DLRL++ +N PGYTGH P  + N  G+A  G++  TT+G
Sbjct:   84 KKFLGQSLYETDFVHFQNQGKALLEMPREE-YKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALER-LTLFVSNATSKLHGKPSWMEYLSLRRLLP----GTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.220e-29
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  358 YRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKTGMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSGAAALGL 792
            Y+   VPEW+  ++ +   +   +   S +Q D+G   E P  R    KTGM+ TT DL  GTTK TY +PG+ G IP +++N R   H D +        LRL++RHN PGYTG  P+ A ND G+   G+N  T+SGA+ALGL
Sbjct:  115 YQGATVPEWVTASKAITEDVVPRQPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASALGL 259          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A024U6R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6R1_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.690e-29
Identity = 84/257 (32.68%), Postives = 122/257 (47.47%), Query Frame = 1
Query:   43 SKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRL------------DAGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            S+ FL  T+Y++DF +F  E  ++        +   FD L            D     +   D+  ++    G+     I D    MF+A  DG ISW   Q+ + +  S      +    Q   WL F       + HG    S HQ+D G  G  P  R    +T GM+STT D+FDGT+K T+ +P Y GFIP +K N       D  + R K+ DLRL++ +N PGYTGH P  + N  G+A+ G++  TT+G
Sbjct:   88 SRTFLGQTLYQHDFLNFHEEGRRI-AALPMAAYAAAFDELTHVPNQDSTSDADPKQKKIARDDVKAVLCAVYGKPPTARILDIYAHMFDACPDGFISWEIFQEAVCRLSSLLLHQTVKVSGQAG-WLEF--VAAKHVLHGGTPASSHQIDFGTYGGNPLARPYVGRTNGMASTTADMFDGTSKATFHIPRYQGFIPHTKYNPTAVAQGDCEHVRGKSEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDGRTTNG 340          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: W4FY68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY68_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.250e-28
Identity = 90/262 (34.35%), Postives = 129/262 (49.24%), Query Frame = 1
Query:   43 SKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKREFDRL-------------DAGNGVVLIRD-MPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPE---WLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            S+ FL  T+Y+NDF +F  E  ++       V+   FD+L             D      L RD +  L+    G+     I +    MF+A  DG ISW    D  ++AV+   S +L++  ++     W  F+      +  G    S HQ+D G  G  P  R    +T GM+STT DLFDGTTK T+ +P Y GFIP +K N       D    R K  DLRL++ +N PGYTGH P  + N  G+A+ G+++ TT+G
Sbjct:   88 SRTFLGQTLYQNDFLNFQDEGRRI-AALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDDVKTLLRQVYGKPPTSRILEIYAHMFDACPDGFISW----DVFQEAVARLASFLLHQTIKISGQAGW--FDFVAAKQMLPGGTPASSHQLDFGTYGSEPLARPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGKEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKTGTDSRTTNG 342          
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Match: A0A6A5B0E1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0E1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.310e-27
Identity = 88/267 (32.96%), Postives = 125/267 (46.82%), Query Frame = 1
Query:   43 SKPFLHNTVYENDFRDF---------------CAEADQLEGGGEQNVFKREFDRLD----AGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISWLDLQDGLRKAVSATRSDVLYRERQVPE---WLVFNRKVKPAITHGKKTESCHQMDIGKDGEIPSHRRIWYKT-GMSSTTLDLFDGTTKDTYQVPGYGGFIPASKQNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCGSNALTTSG 774
            S+ FL  T+Y+NDF +F                A  DQL     Q+    + D       A + V        L+    G+     I +    MF+A  DG ISW    D  ++AV+   S +L++  ++     W  F+      +  G    S HQ+D G  G  P  R    +T GM+STT DLFDGTTK T+ +P Y GFIP +K N       D    R    DLRL++ +N PGYTGH P  + N  G+A+ G+++ TT+G
Sbjct:   88 SRTFLGQTLYQNDFLNFQDEGRRIAALPAAVYAASFDQLATVPNQDPTPSDSDLFKLKRLARDDVXXXXXXXTLLRQVYGKPPTSRILEIYAHMFDACPDGFISW----DVFQEAVARLASFLLHQTIKISGQAGW--FDFVAAKQMLPGGTPASSHQLDFGTYGSEPLVRPYIGRTNGMASTTTDLFDGTTKATFHIPRYQGFIPQTKYNPTAVAQGDGEQTRGTEEDLRLYHLNNLPGYTGHKPVDSKNVRGEAKSGTDSRTTNG 348          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8707.20245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FI09_ECTSI7.260e-15275.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLH4_9STRA2.540e-5837.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UFG0_9STRA2.330e-4036.26Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6G0XRS2_9STRA3.950e-3233.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KW59_9STRA1.540e-3033.07Aste57867_12656 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZS18_9STRA1.960e-3034.54Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2FHF5_9STRA1.220e-2942.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024U6R1_9STRA3.690e-2932.68Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4FY68_9STRA7.250e-2834.35Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A5B0E1_9STRA2.310e-2732.96Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8707contigM-pyrifera_M_contig8707:6919..10059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score435.6
Seed ortholog evalue1.6e-119
Seed eggNOG ortholog2880.D7FI09
Hectar predicted targeting categoryother localisation
EggNOG OGs2CYS9@1,2S63T@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006620.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size801
Cds size801
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8707.20245.1prot_M-pyrifera_M_contig8707.20245.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8707 6919..10059 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816780.0938032-CDS-M-pyrifera_M_contig8707:6918..71551622816780.0938032-CDS-M-pyrifera_M_contig8707:6918..7155Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 6919..7155 -
1692278174.1697633-CDS-M-pyrifera_M_contig8707:6918..71551692278174.1697633-CDS-M-pyrifera_M_contig8707:6918..7155Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 6919..7155 -
1622816780.106474-CDS-M-pyrifera_M_contig8707:7387..75491622816780.106474-CDS-M-pyrifera_M_contig8707:7387..7549Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 7388..7549 -
1692278174.1844594-CDS-M-pyrifera_M_contig8707:7387..75491692278174.1844594-CDS-M-pyrifera_M_contig8707:7387..7549Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 7388..7549 -
1622816780.1212912-CDS-M-pyrifera_M_contig8707:8490..87931622816780.1212912-CDS-M-pyrifera_M_contig8707:8490..8793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 8491..8793 -
1692278174.195725-CDS-M-pyrifera_M_contig8707:8490..87931692278174.195725-CDS-M-pyrifera_M_contig8707:8490..8793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 8491..8793 -
1622816780.1345952-CDS-M-pyrifera_M_contig8707:9960..100591622816780.1345952-CDS-M-pyrifera_M_contig8707:9960..10059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 9961..10059 -
1692278174.2064953-CDS-M-pyrifera_M_contig8707:9960..100591692278174.2064953-CDS-M-pyrifera_M_contig8707:9960..10059Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8707 9961..10059 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8707.20245.1

>prot_M-pyrifera_M_contig8707.20245.1 ID=prot_M-pyrifera_M_contig8707.20245.1|Name=mRNA_M-pyrifera_M_contig8707.20245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
GVSAKHFSASPQDRSKPFLHNTVYENDFRDFCAEADQLEGGGEQNVFKRE
FDRLDAGNGVVLIRDMPRLIEGALGRDTRPWIKDRILKMFEANRDGKISW
LDLQDGLRKAVSATRSDVLYRERQVPEWLVFNRKVKPAITHGKKTESCHQ
MDIGKDGEIPSHRRIWYKTGMSSTTLDLFDGTTKDTYQVPGYGGFIPASK
QNSRGREHSDMRNPRPKALDLRLFYRHNTPGYTGHAPSAACNDPGQARCG
SNALTTSGAAALGLIL*
back to top

mRNA from alignment at M-pyrifera_M_contig8707:6919..10059-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8707.20245.1 ID=mRNA_M-pyrifera_M_contig8707.20245.1|Name=mRNA_M-pyrifera_M_contig8707.20245.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3141bp|location=Sequence derived from alignment at M-pyrifera_M_contig8707:6919..10059- (Macrocystis pyrifera P11B4 male)
GGGGTGTCCGCCAAGCACTTTTCCGCGAGCCCCCAAGATCGATCCAAGCC GTTCCTGCATAATACTGTGTACGAGAACGATTTCAGGGACTTCTGCGCAG TGAGTCGAGTTGCTTTACAATAGCGGAGCGTGCGTGCCCTTTTCCGGTGG TTGGAATCAAGGACGGGGGTTGGGGTGGTGCGGTAGAAATGACGTTTTGC TCGAAGATTCGGAAAGAGCATTGGCGCGCACTTTTTCTTCTCTTGCTTCT TTCGCAAAAACTGCAACGCAACTCCACACCGCGTACCGAAAATGTGGTCG TGGGATGGTACACTACAGAGGAGTATGCCCAACCGTGTGGCAATACAGAT GTAAGGTGCCACAGGACGTACGTAGCCATCCTCGCTGAGCAATGGTCGGG TGTACCGAAAAACGTGCACTCCGTCAGGGCCTTTTGTTTGGCACCACGAC AATCAGCATCAGGCAACTCCACATATACCTATGTGGGCTGCATAATACAC ATATTACGAGGGGGCATAGTAATGCATAGTAATACATATTGCGGGAGACC ATAGTAAAAAAATAGGACCTACGATACATAAAAACCTTTATACTTACCTA TTTTTACTAACAATATTTGGTCCTATTTACTACGGCCCCCCGTAATAGTA ATCAGAATCCACCATGGACCTGAAAAGCAGATATCCGCAGCCTATGGTTA TGCAACATACCTGGTATTTGGTTCTCATTACTACGGCAAGTTCCCCGGGA GGGGTGCAGGAGCTCCGGGGGGCAATGACATAGAGGGAGGGGTAGGGCGT AATATCGTCACCTCGAAGTACGATACGAGTACAACACTGATATCTATCGG AGAGCGTCGTGATGAGTAGAGTTGTGCTTTTAGCCGACGGGGGCGCATGG CAGGGCATGTCAGGGAGACAAAACTACCACATCTTCAGTGCGTTTTAGGT CAGTAACCACCGTACCATCGCTGCTAGGAACGCAGAAGCAAAGCCACTTT CGCATGCTGCTTTCAACCTGGCCACTACGTACGTATCATAGCTCGACGTA TTGTGTGTCAGTTCCTTGTTAAGCTAGTGCTTAACACAACGCAACGAGGC GCTTCTGGTCAGCTTCGAATTGTGCGCAATTCCCGTTTTTCGTTATCCAA AGATGGACCAAGCTGTCAACGGAAAAAGCTTGTACGCGTTCGATTCCGTC TCTAGCGGGAGGATCTAATCAACCCCCGCGTGTGGGAAACCGTGCACCAC AAAAACGCAAAAACAGGAAGCGGACCAGCTTGAGGGCGGCGGAGAGCAAA ACGTGTTTAAGCGCGAGTTCGATAGACTGGACGCCGGCAACGGTGTTGTC TTAATTCGCGACATGCCGCGGCTTATTGAGGGGGCGCTTGGGCGCGACAC CCGGCCATGGATCAAAGACCGCATCTTGAAGATGTTTGAGGCGAACAGGG ACGGCAAGATATCCTGGCTCGACCTGCAAGACGGCCTGCGCAAGGCTGTG AGCGCTACGAGGTCGGACGTGTTGTACAGGGAGCGACAGGTTCCTGAATG GCTCGTGTTTAACCGAAAGGTGCGATAACTCCTCTTGATTATATATGTAC GTCAGGGCAACACGCGTTTGACTCACCTACTCTCTCTGTCCACAGGCAGC ACCAGCCAAGGCGCCAGGTCGAAAAGGTGCGACGTGCCTTACCGAGGGTA GAGTTGTACACACGTACATATATAGCACGCCATAGTCCACCTTCTGTTGA AGACCTGCGTGGTCGCTGTGGGAGAAGCACGATATACGTACGCGAGTCAC GCTGCTGCGGTAACGTGGGATGGGCGCTCTCATTTTCTCAGGCTCCTTTT CGATGAGAAGAACTCTGGTACATATACCTCACCCGAAAAAAGCGTGTTCG AGAAAACTACGCGACAGAAACCGATAAACACTGAAAATCTCACGAGTCTT CAGGGAATATACAATCATAGAAAAAAGCAATCCCTTGAAAACACAGATGT ATGCGATTATTATAAAAACCACGAACAAAATTGTTGAAACACGCATCAAT GGGGATTGCAAATACGTTTTTGTGTGTCACCTCGTCATCTCCCTTTAAGG GCAAATTGCAGTCCCGTTTTGGGGATAGCCTACTTATAATTTGAGTAATT TTTCCACAAAACGGAACTGCATGCAGGTCTAAAAGGGTCAAGACGCACAC CCATCCCCCTCGGTAAGAAATATCTGGACCCGAAAATAAAAATACATCCC GGCTATCGTGGCATGAGTAGATGAAGAACGAGATTCCCGCCTCCCCCCGC GCCGCCGCCGCCCTAGGTTTAGAACAGGAAGCAAGGTGATTTTTCCTTTG TACCCAGATTGAACTGCCGGCCGACGGTTTCTTGTTTTCGTTCTCGACTA GTAATAATAGTAGTCTGGCATCCAGGCGATTCTGTTCTCGCGTGTATTGG TACGTATATATAGGTACGTGATGCGCGTGACTATTTACACTTGCGATCAC TTTATTGCAGGTAAAACCGGCGATCACGCACGGGAAAAAGACGGAGAGCT GCCACCAGATGGACATAGGCAAGGACGGAGAAATACCGTCGCACCGTCGG ATCTGGTACAAGACGGGCATGTCTTCCACCACGCTCGATCTTTTCGACGG CACCACCAAGGACACGTACCAGGTTAGGTTTACTCATATTTGACCGATGC CTGCTAAGGGTGGTGCCCATTGACCAATGCCCTATAGGGGTGATGCCACA CGCCGAAGTGTACGCAACTGGCCCCGTCGCCAGTTTGCCCCTGCTATACC CCGTACCCCGTCTAGCTCCCCTCCTCTCTCGCCAACGAAAGTACCCTCTG CTCCCTCCCCCTTCCCCCCACACTCTCGCCTGCGTGACGGCACACAATAA CAAGGTGCCGGGGTACGGCGGGTTCATCCCGGCGAGCAAACAGAACAGTC GCGGCCGCGAGCACAGCGACATGCGCAACCCGCGACCGAAGGCCCTGGAC TTGCGCCTCTTCTACCGGCACAACACCCCGGGCTACACGGGCCACGCGCC GTCTGCGGCTTGCAACGACCCGGGTCAGGCTCGGTGCGGGTCTAACGCGC TTACTACCTCAGGCGCCGCCGCGCTCGGGCTGATCCTGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8707:6919..10059-

>mRNA_M-pyrifera_M_contig8707.20245.1 ID=mRNA_M-pyrifera_M_contig8707.20245.1|Name=mRNA_M-pyrifera_M_contig8707.20245.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig8707:6919..10059- (Macrocystis pyrifera P11B4 male)
GGGGTGTCCGCCAAGCACTTTTCCGCGAGCCCCCAAGATCGATCCAAGCC
GTTCCTGCATAATACTGTGTACGAGAACGATTTCAGGGACTTCTGCGCAG
GGGTGTCCGCCAAGCACTTTTCCGCGAGCCCCCAAGATCGATCCAAGCCG
TTCCTGCATAATACTGTGTACGAGAACGATTTCAGGGACTTCTGCGCAGA
AGCGGACCAGCTTGAGGGCGGCGGAGAGCAAAACGTGTTTAAGCGCGAGT
TCGATAGACTGGACGCCGGCAACGGTGTTGTCTTAATTCGCGACATGCCG
CGGCTTATTGAGGGGGCGCTTGGGCGCGACACCCGGCCATGGATCAAAGA
CCGCATCTTGAAGATGTTTGAGGCGAACAGGGACGGCAAGATATCCTGGC
TCGACCTGCAAGACGGCCTGCGCAAGGCTGTGAGCGCTACGAGGTCGGAC
GTGTTGTACAGGGAGCGACAGGTTCCTGAATGGCTCGTGTTTAACCGAAA
GGAAGCGGACCAGCTTGAGGGCGGCGGAGAGCAAAACGTGTTTAAGCGCG
AGTTCGATAGACTGGACGCCGGCAACGGTGTTGTCTTAATTCGCGACATG
CCGCGGCTTATTGAGGGGGCGCTTGGGCGCGACACCCGGCCATGGATCAA
AGACCGCATCTTGAAGATGTTTGAGGCGAACAGGGACGGCAAGATATCCT
GGCTCGACCTGCAAGACGGCCTGCGCAAGGCTGTGAGCGCTACGAGGTCG
GACGTGTTGTACAGGGAGCGACAGGTTCCTGAATGGCTCGTGTTTAACCG
AAAGGTAAAACCGGCGATCACGCACGGGAAAAAGACGGAGAGCTGCCACC
AGATGGACATAGGCAAGGACGGAGAAATACCGTCGCACCGTCGGATCTGG
TACAAGACGGGCATGTCTTCCACCACGCTCGATCTTTTCGACGGCACCAC
CAAGGACACGTACCAGGTAAAACCGGCGATCACGCACGGGAAAAAGACGG
AGAGCTGCCACCAGATGGACATAGGCAAGGACGGAGAAATACCGTCGCAC
CGTCGGATCTGGTACAAGACGGGCATGTCTTCCACCACGCTCGATCTTTT
CGACGGCACCACCAAGGACACGTACCAGGTGCCGGGGTACGGCGGGTTCA
TCCCGGCGAGCAAACAGAACAGTCGCGGCCGCGAGCACAGCGACATGCGC
AACCCGCGACCGAAGGCCCTGGACTTGCGCCTCTTCTACCGGCACAACAC
CCCGGGCTACACGGGCCACGCGCCGTCTGCGGCTTGCAACGACCCGGGTC
AGGCTCGGTGCGGGTCTAACGCGCTTACTACCTCAGGCGCCGCCGCGCTC
GGGCTGATCCTGTGAGTGCCGGGGTACGGCGGGTTCATCCCGGCGAGCAA
ACAGAACAGTCGCGGCCGCGAGCACAGCGACATGCGCAACCCGCGACCGA
AGGCCCTGGACTTGCGCCTCTTCTACCGGCACAACACCCCGGGCTACACG
GGCCACGCGCCGTCTGCGGCTTGCAACGACCCGGGTCAGGCTCGGTGCGG
GTCTAACGCGCTTACTACCTCAGGCGCCGCCGCGCTCGGGCTGATCCTGT
GA
back to top