mRNA_M-pyrifera_M_contig87026.20236.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A5A8D329_CAFRO (DNA replication licensing factor MCM6 n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8D329_CAFRO) HSP 1 Score: 250 bits (638), Expect = 2.490e-74 Identity = 123/209 (58.85%), Postives = 161/209 (77.03%), Query Frame = 1 Query: 7 SGMSEEGESQR-VREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 SG+ E S R V+EYE+ +++M E DQ+TLFVDFSHL +D +LA+T+ EEYYRFEP +R + VV++ +FA EG RDFFVAFYN+ +LRVR+L+ ++G L SF+GTVTRTSEVRPEL++G+F CE+C+T++ VEQQFK+T P C N C N++ W+L ++R RF DWQRVRVQENA+EIP GSMPR+VDVVLR AVE Sbjct: 43 SGIDERSRSTRLVKEYELAVDSMKEFDQNTLFVDFSHLQQYDSHLASTIVEEYYRFEPFLRTAVFSVVKDRHADFALVEGSPRDFFVAFYNMQAQLRVRDLKTREIGCLTSFNGTVTRTSEVRPELLSGSFECEECSTVLDGVEQQFKFTYPVRCSNQHCPNKSGWKLRLDRCRFVDWQRVRVQENADEIPPGSMPRTVDVVLRGGAVE 251
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A7S0CZR7_MICPS (DNA replication licensing factor MCM6 (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CZR7_MICPS) HSP 1 Score: 212 bits (540), Expect = 9.360e-65 Identity = 104/198 (52.53%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 43 REYEVQINTMAEMDQSTLFVDFSHLFAFDRYLA-TTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDS-RDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 R+Y Q+ M E +TL+V+F HL FD LA ++ +Y+++P +R + E V++ +P +++G ++F+VAF NL R+REL+ +GQL SFSGTVTRTSEVRPEL+ GAF+C +C TLV +VEQQ +YTTP +C NA+CGNR KW L + +F DWQRVRVQENA E+PAGS+PRS++V+LRH AVE Sbjct: 74 RDYVEQLELMYERSGTTLYVNFQHLMEFDGVLAHEAVEANFYKYQPFLRRAVVEFVRQHKPAMVRWDGGKEKEFWVAFVNLPRVHRLRELKAENIGQLTSFSGTVTRTSEVRPELLLGAFKCAECDTLVPDVEQQCRYTTPAICLNAQCGNRMKWTLAQDGCKFVDWQRVRVQENANEVPAGSLPRSMEVILRHEAVE 271
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A2G9H878_9LAMI (DNA replication licensing factor MCM6 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H878_9LAMI) HSP 1 Score: 215 bits (548), Expect = 1.030e-64 Identity = 103/210 (49.05%), Postives = 144/210 (68.57%), Query Frame = 1 Query: 1 RTSGMSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 +T ++EEG YE ++ M + +T+F+DFSH+ F+ L + +E+ RFEP++R + EL+P F + ++D VAFYNL R+REL A++G+LVS G VTRTSEVRPEL+ G F+C +C +++NVEQQFKYT P +C NA C NRTKW L+ + S+F DWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 27 KTFRLAEEGRGAYDPYYEAEVEAMRPNESNTMFIDFSHVMRFNDVLQKAISDEFLRFEPYLRNACKRFIMELKPTFIADDNPNKDINVAFYNLPLVKRLRELTTAEIGKLVSVGGVVTRTSEVRPELLQGTFKCLECGNIIKNVEQQFKYTEPIICMNATCQNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHDIVE 236
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A7C9AW07_OPUST (DNA replication licensing factor MCM6 (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AW07_OPUST) HSP 1 Score: 208 bits (529), Expect = 2.180e-64 Identity = 97/194 (50.00%), Postives = 137/194 (70.62%), Query Frame = 1 Query: 49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 YE +I M + +T+F+DFSH+ F+ L + +EY RFEP+++ V E +P+F + ++D V+F+N+ R+REL ++VG+LVS +G VTRTSEVRPEL+ G F+C DC +++NVEQQFKYT P +C NA C NR W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 38 YESEIAAMEANESTTMFIDFSHVMRFNDILQRAISDEYLRFEPYLKNACKRFVMEQKPKFIADDNPNKDINVSFFNIPLVKRLRELTTSEVGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGNVIKNVEQQFKYTEPTICVNAACSNRRNWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 231
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: B9T7E5_RICCO (DNA replication licensing factor MCM6 n=8 Tax=Euphorbiaceae TaxID=3977 RepID=B9T7E5_RICCO) HSP 1 Score: 219 bits (558), Expect = 6.340e-64 Identity = 103/194 (53.09%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 YE QI TM + +T+F+DFSH+ F+ L + +EY RFEP+++ V E+ P F + ++D VAFYN+ R+REL A++G+LVS +G VTRTSEVRPEL+ G FRC DC +++NVEQQFKYT P +C NA C NR KW L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 40 YEAQIETMKVNESTTMFIDFSHVMRFNDLLQKAIADEYLRFEPYLKNACKRFVMEMNPTFISDDNPNKDINVAFYNIPFSKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFRCLDCGGVIKNVEQQFKYTEPTICVNATCNNRMKWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHDIVE 233
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A540NG59_MALBA (DNA replication licensing factor MCM6 n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NG59_MALBA) HSP 1 Score: 210 bits (534), Expect = 1.760e-63 Identity = 98/194 (50.52%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 YE +I MA + ST+F+DFSH+ F+ L + +E+ RFEP+++ V +L+P F + ++D VAF+NL R+REL A++G+LVS G VTRTSEVRPEL+ G F+C +C +++NVEQQFKYT P +C NA C NR +W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV++RH VE Sbjct: 38 YEAEIEAMAANESSTMFIDFSHVMVFNNLLQKAISDEFLRFEPYLKNACKTFVTQLRPNFIS-DDTNKDINVAFFNLPVSKRLRELTTAEIGKLVSVKGVVTRTSEVRPELLHGTFKCLECGGVIKNVEQQFKYTEPTICVNATCSNRARWALLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVIIRHEIVE 230
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A6I9TPA9_SESIN (DNA replication licensing factor MCM6 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TPA9_SESIN) HSP 1 Score: 219 bits (557), Expect = 4.440e-63 Identity = 105/210 (50.00%), Postives = 146/210 (69.52%), Query Frame = 1 Query: 1 RTSGMSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 +T ++EEG YE ++++M + +T+F+DFSH+ F+ L + +E+ RFEP++R + EL+P F + ++D VAFYNL R+REL ++G+LVS SG VTRTSEVRPEL+ G F+C DC +++NVEQQFKYT P +C NA C NRTKW L+ + S+F+DWQRVR+QE A EIPAGS+PRS+DV+LRH VE Sbjct: 27 KTFRVAEEGRGSYESYYEAEVDSMRPNESNTMFIDFSHVMRFNDVLQKAISDEFLRFEPYLRNACKRFIMELKPTFIADDNPNKDINVAFYNLPLIKRLRELTTTEIGKLVSVSGVVTRTSEVRPELLQGTFKCLDCGNVIKNVEQQFKYTEPIICMNATCQNRTKWALLRQESKFSDWQRVRMQETAREIPAGSLPRSLDVILRHDIVE 236
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A1S3U859_VIGRR (DNA replication licensing factor MCM6 n=10 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3U859_VIGRR) HSP 1 Score: 217 bits (553), Expect = 1.800e-62 Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 1 Query: 46 EYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 +YE +I M + +T+F+DFSH+ F L T+ +EY R+EP+++ V EL+P +G ++D VAFYN+ R+REL +++G+LVS +G VTRTSEVRPEL+ G F+C DC +++NVEQQFKYT P +C NA C NRT+W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 36 QYEAEIEVMRVNESNTMFIDFSHVVRFSDLLQQTISDEYLRYEPYLKNACKRFVMELKPSVVSDDGPNKDINVAFYNIAVIKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGAVIKNVEQQFKYTEPTICTNATCNNRTRWVLLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 230
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A2Z7ATV1_9LAMI (DNA replication licensing factor MCM6 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7ATV1_9LAMI) HSP 1 Score: 217 bits (552), Expect = 2.420e-62 Identity = 101/194 (52.06%), Postives = 138/194 (71.13%), Query Frame = 1 Query: 49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 YE ++ M + +T+F+DFSH+ F+ + + +E+ RFEP++ V EL+P F + ++D VAFYNL R+REL A++G+LVS SG VTRTSEVRPEL+ G F+C DC +V+NVEQQFKYT P +C NA C NR+KW L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 47 YEAEVEAMRPNESNTMFIDFSHVMTFNNIIQKAISDEFLRFEPYLNNACKRFVMELKPSFIADDNQNKDINVAFYNLPMVKRLRELTTAEIGKLVSVSGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPIICMNATCHNRSKWALLRQESKFADWQRVRMQETSQEIPAGSLPRSLDVILRHDIVE 240
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Match: A0A444ZGG5_ARAHY (DNA replication licensing factor MCM6 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444ZGG5_ARAHY) HSP 1 Score: 206 bits (525), Expect = 2.420e-62 Identity = 95/194 (48.97%), Postives = 134/194 (69.07%), Query Frame = 1 Query: 49 YEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYYRFEPHVRAGLAEVVQELQPEFAQFEGDSRDFFVAFYNLMDKLRVRELRCAQVGQLVSFSGTVTRTSEVRPELIAGAFRCEDCATLVRNVEQQFKYTTPQVCPNAECGNRTKWQLVVERSRFADWQRVRVQENAEEIPAGSMPRSVDVVLRHAAVE 630 YE +I M + +T+F+DF H+ F L + +EY RFEP+++ V EL+P F + ++D +AFYNL R+REL +++G+LVS +G VTRTSEVRPELI G F+C +C +++NVEQ+FKYT P +CP C R +W L+ + S+FADWQRVR+QE ++EIPAGS+PRS+DV+LRH VE Sbjct: 37 YEAEIEVMRANESNTMFIDFEHVITFSDLLQKAISDEYLRFEPYLKNACKRFVTELKPTFISDDNPNKDINIAFYNLPIVKRLRELATSEIGRLVSVTGVVTRTSEVRPELIQGTFKCLECGGVIKNVEQEFKYTEPTICPIPTCNKRARWLLMRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILRHEIVE 230 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87026.20236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87026.20236.1 >prot_M-pyrifera_M_contig87026.20236.1 ID=prot_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp MSEEGESQRVREYEVQINTMAEMDQSTLFVDFSHLFAFDRYLATTLQEEYback to top mRNA from alignment at M-pyrifera_M_contig87026:1..630- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87026.20236.1 ID=mRNA_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig87026:1..630- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87026:1..630- >mRNA_M-pyrifera_M_contig87026.20236.1 ID=mRNA_M-pyrifera_M_contig87026.20236.1|Name=mRNA_M-pyrifera_M_contig87026.20236.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig87026:1..630- (Macrocystis pyrifera P11B4 male)back to top |