mRNA_M-pyrifera_M_contig86971.20223.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86971.20223.1
Unique NamemRNA_M-pyrifera_M_contig86971.20223.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A5K1AD23_9MAGN (Uncharacterized protein (Fragment) n=7 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1AD23_9MAGN)

HSP 1 Score: 210 bits (535), Expect = 3.740e-61
Identity = 115/272 (42.28%), Postives = 168/272 (61.76%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD +IRRG +E AR++YEE + +V TVRDF  +F++YT +EE++L  ++   + EE G             ++ G E+G G   DG    +  D       ++ D           D+D+RLA+LE L++RRPE++SSV+LRQNPHNV EW +R +LF +  +  R ++T  EAV+TVD  +A G+P  LW+ FA+LY+   DL +AR+V  R VQ  +  +DDLA+++C WAE E+RH +   AL +++ A   P
Sbjct:  262 GIRQFTDEVGRLWTSLADYYIRRGMYEKARDIYEEGMRTVITVRDFGMIFDSYTQYEESMLAAKMETLDIEEEG------------GEQFGGENGAGEKVDGEDGGAGGDRTDLRGFWLSD---------ENDIDLRLARLEHLMDRRPEIVSSVLLRQNPHNVHEWHKRVKLFKNNPE--RQIMTFTEAVKTVDPMKAVGKPHTLWVAFAKLYENHKDLANARVVFERAVQVNYKALDDLASIWCEWAEMELRHKNFKGALGLLRRATAEP 510          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A250X5W5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5W5_9CHLO)

HSP 1 Score: 212 bits (539), Expect = 3.000e-59
Identity = 124/276 (44.93%), Postives = 164/276 (59.42%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILA----QEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD +IRRG +E AR+VYEE L SV TV DF+ +F+AYT FEE+L+  ++      +++EEGGD             E  AE  VG    G+G    L  +A+                  D+D+RLA+LE L+ RRPELL+SVMLRQNPHNV EW +R +LF   G  +R ++T  EAVRTVD  +A G+P  LW  FA+ Y+  GD+ +AR+V  + +Q  F   DDLA ++C W E E+RH +   AL +M  A   P
Sbjct:  251 GIRKFTDEVGRLWTSLADYYIRRGMFEKARDVYEEGLTSVITVHDFSLIFDAYTQFEESLISAKMEQMADDEDNEEGGD-------------EEDAEAAVGI---GSGEDFLLKDDAK------------------DIDMRLARLEYLISRRPELLNSVMLRQNPHNVAEWHKRVKLFE--GNATRQILTYTEAVRTVDIDKAIGKPHSLWCAFAKFYERHGDVPNARVVFEKAIQVAFKYTDDLAQVWCEWCEMELRHQNFKRALELMHRATADP 490          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A7S1GCU3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCU3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.660e-59
Identity = 116/263 (44.11%), Postives = 160/263 (60.84%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSR-GQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNAL 786
            G+  FTDE GRLWC LAD FIR+G++E AR+VYEEA+ +V TVRDF+ VF+AY  FEE +L  ++   E E+ GD                   G GA    A +    D    +   +E+          GDVD+R+A+LERL++RRP LLSSV+LRQ+PHNV +W++R +L     G  + A+ T  EAV+TVDA +A GR  +LW+ FA+ Y+ +GD+ SAR+V  +     F TVDDLA+++C WAE E+R      AL
Sbjct:   76 GLKRFTDETGRLWCALADFFIRQGNFERARDVYEEAVDAVMTVRDFSVVFDAYAQFEEAILTAKM---EMEDEGD-------------------GEGA----APKEHDADELDDLDELLEEG---------GDVDLRMARLERLLDRRPLLLSSVLLRQSPHNVAQWLKRVKLVEKGPGGAAAAIRTFGEAVKTVDAAKAVGRAHELWVAFARYYERAGDVASARVVFEKATNVNFRTVDDLASVWCAWAEMELRQERYDEAL 303          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A7S0SS95_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SS95_9CHLO)

HSP 1 Score: 208 bits (529), Expect = 4.200e-59
Identity = 121/272 (44.49%), Postives = 166/272 (61.03%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD +IRRG +E AR+VYEE LA+V TVRDF+ +F+AYT FEE++L  ++ A   ++G               ES   DG  A D+G       DF  + +                D+D+RLA+LE L+ RRPELLSSVMLRQNPH+V EW +R  LF   G  +R ++T  EAV+TVD +QA G+P  LW++FA+ Y+  GD ++AR+V  +GV   ++ +DDLA ++C W E E+R  +   AL +M+ A   P
Sbjct:  279 GIRKFTDEVGRLWTSLADFYIRRGLFEKARDVYEEGLATVITVRDFSLIFDAYTQFEESMLSAKMEAAAEDDG--------------PESADGDGENADDNGT------DFLFKDAG--------------DDLDLRLARLEFLMGRRPELLSSVMLRQNPHSVHEWQKRVALFE--GNPTRQILTFTEAVKTVDPSQALGKPHSLWVDFAKFYEIHGDADNARVVFEKGVCVPYSKLDDLATVWCEWGELELRQKNFAGALTLMRRATAEP 514          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A061S5R0_9CHLO (Pre-mRNA-splicing factor SYF1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S5R0_9CHLO)

HSP 1 Score: 211 bits (537), Expect = 4.920e-59
Identity = 119/272 (43.75%), Postives = 161/272 (59.19%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLWC LAD +IRRG +E AR++YEE + +V TVRDF+ VF+A T FEE+L+  ++  +  E+                                       EA      +D   F  K    D+D+RLA+LE L ERRPELLSSVMLRQNPHNV EW +R +LF   G  ++ ++T  EAV+TVD+ +A G+P  LW  FA+ Y+  GDL++AR++  +G   R+  VDDLA+L+C WAE E+RH +   AL +M+ A  AP
Sbjct:  249 GIRKFTDEVGRLWCSLADYYIRRGMFEKARDIYEEGMTTVVTVRDFSMVFDALTQFEESLISAKMENEAEED---------------------------------------EAPEPEEGDDGTDFLLKDDGRDLDLRLARLEWLTERRPELLSSVMLRQNPHNVHEWHKRVKLFG--GNPTKQILTYTEAVKTVDSDKAVGKPHTLWAAFAKFYERHGDLKNARIIFEKGCAVRYKYVDDLASLWCEWAEMELRHDNFQEALNLMRRATAAP 479          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A6V7QFM2_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QFM2_ANACO)

HSP 1 Score: 208 bits (529), Expect = 1.100e-58
Identity = 118/275 (42.91%), Postives = 162/275 (58.91%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVW---HGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD ++RRG +E AR+++EE LA+VTTVRDF+ +FEAYT FE++ L  ++   E + G +                        DDGA      D  A++      A +F    W     D D+RLA+ ERL +RRPELL+SV+LRQNPHNV +W RR +LF   G  +R  +T  EAVRTVD  +A G+P  LW+ FA++Y+    L+SA  V ++  Q  +  VD LA+++C WAE E+RH +   AL +M+ A   P
Sbjct:  251 GIRRFTDEVGRLWTSLADYYVRRGLYEKARDIFEEGLATVTTVRDFSVIFEAYTQFEQSALAAKLETAEEDSGSEV-----------------------DDGADEKGGKDGVAKL------AKKFLHGFWLNDDDDTDLRLARFERLFDRRPELLNSVLLRQNPHNVEQWHRRVKLFE--GDPARQALTYVEAVRTVDPMKAVGKPHTLWVAFARMYENHNRLDSAEEVFKKATQVNYKAVDHLASVWCEWAEMELRHKNFPKALELMRQATAEP 494          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A2P6TSP1_CHLSO (Ubiquitinyl hydrolase 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSP1_CHLSO)

HSP 1 Score: 210 bits (534), Expect = 2.610e-58
Identity = 122/272 (44.85%), Postives = 164/272 (60.29%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD FIRRG +E AR+VYEE L SV TVRDF+ V++A T FEE+L+  ++                      +++  ED                 E   +   ED   F  K    D+D+RLA+LE L+ERRPELLSSVMLRQNPHNV EW +RA+LF++    ++ ++   EAV+TVD  +A G+P  LW+ FA+LY+  GDL +AR++  + VQ RF  VDDLA+++C WAE E+RH +   AL +M+ A   P
Sbjct:  402 GIRRFTDEVGRLWTSLADYFIRRGMFERARDVYEEGLTSVVTVRDFSLVYDALTQFEESLISAKM----------------------EQAADED-----------------EEAPALEDEDGEDFLLKDGGDDLDLRLARLEHLMERRPELLSSVMLRQNPHNVHEWHKRAKLFAA--NPTKQILCYTEAVKTVDPERAVGKPHTLWVAFAKLYERHGDLPNARIIFEKAVQARFKYVDDLASVWCEWAEMELRHKNFKRALELMRRATARP 632          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A6P5GQW4_ANACO (pre-mRNA-splicing factor SYF1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GQW4_ANACO)

HSP 1 Score: 208 bits (529), Expect = 6.920e-58
Identity = 118/275 (42.91%), Postives = 162/275 (58.91%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVW---HGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD ++RRG +E AR+++EE LA+VTTVRDF+ +FEAYT FE++ L  ++   E + G +                        DDGA      D  A++      A +F    W     D D+RLA+ ERL +RRPELL+SV+LRQNPHNV +W RR +LF   G  +R  +T  EAVRTVD  +A G+P  LW+ FA++Y+    L+SA  V ++  Q  +  VD LA+++C WAE E+RH +   AL +M+ A   P
Sbjct:  253 GIRCFTDEVGRLWTSLADYYVRRGLYEKARDIFEEGLATVTTVRDFSVIFEAYTQFEQSALAAKLETAEEDSGSEV-----------------------DDGAEEKGGKDGVAKL------AKKFLHGFWLNDDDDTDLRLARFERLFDRRPELLNSVLLRQNPHNVEQWHRRVKLFE--GDPARQALTYVEAVRTVDPMKAVGKPHTLWVAFARMYENHNRLDSAEEVFKKATQVNYKAVDHLASVWCEWAEMELRHKNFPKALELMRQATAEP 496          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: W1NL76_AMBTC (Suf domain-containing protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1NL76_AMBTC)

HSP 1 Score: 207 bits (527), Expect = 1.410e-57
Identity = 115/276 (41.67%), Postives = 167/276 (60.51%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETL----LEGQILAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  +TDEVGRLW  LAD ++RRG +E AR++YEE + +V TVRDF  +F++YT FEE++    +E   L  +  EGG+             E   + GV +  +      P     R+S    D    +      D+D+RLA+LE L++RRPEL+SSV+LRQNPHNV EW  RA+LF  +   +R ++T  EAVRTVD  +A G+P  LW+ FA+LY+   DL + R++  + VQ  +  +DDLA+++C WAE E+RH ++  AL +M+ A   P
Sbjct:  237 GIRKYTDEVGRLWTSLADYYLRRGLYEKARDIYEEGMTTVVTVRDFGMIFDSYTQFEESMVVARMESLNLDDDENEGGNHRKKDE------NEGSEKSGVSSKLEDDNGQDPRLLVDRLSKKSFDGFWLNDVK---DIDLRLARLENLMDRRPELVSSVLLRQNPHNVPEWHNRAKLFKDKP--TRQILTFTEAVRTVDPMKAVGKPHTLWVSFARLYEKHNDLANTRVIFEKAVQVNYKALDDLASVWCEWAEMELRHKNSRGALELMRRATTKP 501          
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Match: A0A7S0RCZ1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RCZ1_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 2.870e-57
Identity = 125/274 (45.62%), Postives = 165/274 (60.22%), Query Frame = 1
Query:    1 GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVFEAYTAFEETLLEGQI--LAQEHEEGGDXXXXXXXXXXXXKESGAEDGVGASDDGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPELLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQATGRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAEWEIRHGHAHNALRVMQDAARAP 816
            GI  FTDEVGRLW  LAD +IRR  +E AR+VYEE + SVTTVRDF+T+F+AY  FEE++L  ++  +A E +E               +E   ED      DGA      DF  +                  D+D+RLA+LE  +ERRPEL+SSVMLRQNPHNV EW +R +LF   G+ +R +VT  EAV+TVD  +A G+P  LWI FA+ Y+  GDL +AR+VL + V   +  VDDLA ++C WAE E+RH +   AL +M+ A   P
Sbjct:  242 GIRKFTDEVGRLWTSLADYYIRRALFEKARDVYEEGMTSVTTVRDFSTIFDAYMQFEESMLNAKMEQVADEMDE---------------EEPDEED------DGA------DFLLKDDG--------------NDLDLRLARLEYHMERRPELVSSVMLRQNPHNVHEWHKRVKLFE--GKPTRQIVTFTEAVKTVDIQKAVGKPHSLWIAFAKFYEGHGDLANARVVLEKAVLVPYKGVDDLATVWCEWAEMELRHNNYAPALALMRRATEKP 472          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86971.20223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5K1AD23_9MAGN3.740e-6142.28Uncharacterized protein (Fragment) n=7 Tax=Nymphae... [more]
A0A250X5W5_9CHLO3.000e-5944.93Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S1GCU3_9STRA3.660e-5944.11Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S0SS95_9CHLO4.200e-5944.49Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A061S5R0_9CHLO4.920e-5943.75Pre-mRNA-splicing factor SYF1 n=1 Tax=Tetraselmis ... [more]
A0A6V7QFM2_ANACO1.100e-5842.91Uncharacterized protein n=1 Tax=Ananas comosus var... [more]
A0A2P6TSP1_CHLSO2.610e-5844.85Ubiquitinyl hydrolase 1 n=1 Tax=Chlorella sorokini... [more]
A0A6P5GQW4_ANACO6.920e-5842.91pre-mRNA-splicing factor SYF1 n=2 Tax=Ananas comos... [more]
W1NL76_AMBTC1.410e-5741.67Suf domain-containing protein n=4 Tax=Amborella tr... [more]
A0A7S0RCZ1_9CHLO2.870e-5745.62Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86971contigM-pyrifera_M_contig86971:5..820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score215.3
Seed ortholog evalue3.5e-53
Seed eggNOG ortholog13333.ERM94339
KEGG koko:K12867
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000349,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000974,GO:0001701,GO:0001824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0018130,GO:0019438,GO:0022607,GO:0022613,GO:0022618,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048856,GO:0050896,GO:0051716,GO:0065003,GO:0071007,GO:0071010,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990904
EggNOG free text desc.Pre-mRNA-splicing factor
EggNOG OGs37JKA@33090,3GB53@35493,KOG2047@1,KOG2047@2759
COG Functional cat.A
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Exons1
Model size816
Cds size816
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.14576-CDS-M-pyrifera_M_contig86971:4..8201622816779.14576-CDS-M-pyrifera_M_contig86971:4..820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86971 5..820 +
1692278173.615883-CDS-M-pyrifera_M_contig86971:4..8201692278173.615883-CDS-M-pyrifera_M_contig86971:4..820Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86971 5..820 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86971.20223.1prot_M-pyrifera_M_contig86971.20223.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86971 5..820 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86971.20223.1

>prot_M-pyrifera_M_contig86971.20223.1 ID=prot_M-pyrifera_M_contig86971.20223.1|Name=mRNA_M-pyrifera_M_contig86971.20223.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=272bp
GIAWFTDEVGRLWCLLADLFIRRGSWEAARNVYEEALASVTTVRDFATVF
EAYTAFEETLLEGQILAQEHEEGGDGEEGGDGGEGNSKESGAEDGVGASD
DGAGRSSPLDFEARVSAYVEDAVRFHGKVWHGDVDVRLAQLERLVERRPE
LLSSVMLRQNPHNVVEWVRRARLFSSRGQTSRALVTLAEAVRTVDATQAT
GRPQQLWIEFAQLYDASGDLESARLVLRRGVQWRFATVDDLAALFCWWAE
WEIRHGHAHNALRVMQDAARAP
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mRNA from alignment at M-pyrifera_M_contig86971:5..820+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86971.20223.1 ID=mRNA_M-pyrifera_M_contig86971.20223.1|Name=mRNA_M-pyrifera_M_contig86971.20223.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig86971:5..820+ (Macrocystis pyrifera P11B4 male)
GGCATCGCCTGGTTCACCGACGAAGTGGGCCGCCTCTGGTGCCTGCTGGC CGACCTCTTCATCCGCAGGGGCAGCTGGGAGGCCGCCAGGAACGTCTACG AGGAAGCCCTCGCCAGCGTCACCACCGTCCGCGACTTTGCTACCGTCTTC GAGGCATACACCGCCTTCGAGGAAACCCTCCTCGAGGGGCAAATCCTAGC GCAGGAGCACGAGGAGGGCGGGGACGGGGAGGAGGGTGGGGACGGTGGGG AGGGGAATTCGAAAGAATCTGGTGCTGAGGATGGAGTGGGTGCTTCGGAT GATGGTGCTGGTCGATCGAGTCCTTTGGATTTTGAGGCTCGTGTGTCTGC GTATGTGGAGGATGCGGTTCGGTTCCATGGCAAGGTGTGGCATGGGGATG TGGACGTTCGATTGGCGCAGTTGGAGCGTTTGGTGGAGCGTCGCCCAGAG CTCTTGTCGAGTGTGATGCTTCGTCAGAACCCGCACAACGTGGTGGAGTG GGTGCGTCGTGCCCGGCTCTTCTCCTCCCGAGGACAGACATCTCGCGCGT TGGTGACGCTGGCAGAGGCCGTACGCACAGTGGACGCGACACAGGCCACT GGTCGGCCGCAGCAGCTGTGGATCGAGTTTGCACAGCTGTACGACGCCAG TGGAGATTTGGAGAGTGCCAGACTCGTGCTGCGCCGCGGCGTGCAATGGC GCTTCGCGACCGTTGACGACCTCGCAGCTCTCTTCTGCTGGTGGGCCGAG TGGGAAATCCGACACGGCCACGCCCACAACGCGCTCCGTGTGATGCAGGA CGCCGCAAGAGCACCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86971:5..820+

>mRNA_M-pyrifera_M_contig86971.20223.1 ID=mRNA_M-pyrifera_M_contig86971.20223.1|Name=mRNA_M-pyrifera_M_contig86971.20223.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1632bp|location=Sequence derived from alignment at M-pyrifera_M_contig86971:5..820+ (Macrocystis pyrifera P11B4 male)
GGCATCGCCTGGTTCACCGACGAAGTGGGCCGCCTCTGGTGCCTGCTGGC
CGACCTCTTCATCCGCAGGGGCAGCTGGGAGGCCGCCAGGAACGTCTACG
AGGAAGCCCTCGCCAGCGTCACCACCGTCCGCGACTTTGCTACCGTCTTC
GAGGCATACACCGCCTTCGAGGAAACCCTCCTCGAGGGGCAAATCCTAGC
GCAGGAGCACGAGGAGGGCGGGGACGGGGAGGAGGGTGGGGACGGTGGGG
AGGGGAATTCGAAAGAATCTGGTGCTGAGGATGGAGTGGGTGCTTCGGAT
GATGGTGCTGGTCGATCGAGTCCTTTGGATTTTGAGGCTCGTGTGTCTGC
GTATGTGGAGGATGCGGTTCGGTTCCATGGCAAGGTGTGGCATGGGGATG
TGGACGTTCGATTGGCGCAGTTGGAGCGTTTGGTGGAGCGTCGCCCAGAG
CTCTTGTCGAGTGTGATGCTTCGTCAGAACCCGCACAACGTGGTGGAGTG
GGTGCGTCGTGCCCGGCTCTTCTCCTCCCGAGGACAGACATCTCGCGCGT
TGGTGACGCTGGCAGAGGCCGTACGCACAGTGGACGCGACACAGGCCACT
GGTCGGCCGCAGCAGCTGTGGATCGAGTTTGCACAGCTGTACGACGCCAG
TGGAGATTTGGAGAGTGCCAGACTCGTGCTGCGCCGCGGCGTGCAATGGC
GCTTCGCGACCGTTGACGACCTCGCAGCTCTCTTCTGCTGGTGGGCCGAG
TGGGAAATCCGACACGGCCACGCCCACAACGCGCTCCGTGTGATGCAGGA
CGCCGCAAGAGCACCCGGCATCGCCTGGTTCACCGACGAAGTGGGCCGCC
TCTGGTGCCTGCTGGCCGACCTCTTCATCCGCAGGGGCAGCTGGGAGGCC
GCCAGGAACGTCTACGAGGAAGCCCTCGCCAGCGTCACCACCGTCCGCGA
CTTTGCTACCGTCTTCGAGGCATACACCGCCTTCGAGGAAACCCTCCTCG
AGGGGCAAATCCTAGCGCAGGAGCACGAGGAGGGCGGGGACGGGGAGGAG
GGTGGGGACGGTGGGGAGGGGAATTCGAAAGAATCTGGTGCTGAGGATGG
AGTGGGTGCTTCGGATGATGGTGCTGGTCGATCGAGTCCTTTGGATTTTG
AGGCTCGTGTGTCTGCGTATGTGGAGGATGCGGTTCGGTTCCATGGCAAG
GTGTGGCATGGGGATGTGGACGTTCGATTGGCGCAGTTGGAGCGTTTGGT
GGAGCGTCGCCCAGAGCTCTTGTCGAGTGTGATGCTTCGTCAGAACCCGC
ACAACGTGGTGGAGTGGGTGCGTCGTGCCCGGCTCTTCTCCTCCCGAGGA
CAGACATCTCGCGCGTTGGTGACGCTGGCAGAGGCCGTACGCACAGTGGA
CGCGACACAGGCCACTGGTCGGCCGCAGCAGCTGTGGATCGAGTTTGCAC
AGCTGTACGACGCCAGTGGAGATTTGGAGAGTGCCAGACTCGTGCTGCGC
CGCGGCGTGCAATGGCGCTTCGCGACCGTTGACGACCTCGCAGCTCTCTT
CTGCTGGTGGGCCGAGTGGGAAATCCGACACGGCCACGCCCACAACGCGC
TCCGTGTGATGCAGGACGCCGCAAGAGCACCC
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