mRNA_M-pyrifera_M_contig86969.20221.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86969.20221.1
Unique NamemRNA_M-pyrifera_M_contig86969.20221.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A2D4BRN0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRN0_PYTIN)

HSP 1 Score: 86.3 bits (212), Expect = 6.910e-16
Identity = 77/251 (30.68%), Postives = 113/251 (45.02%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQLRTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENG-HNVECAVFAKSWKKRRKRIPP----TRYEALLPLLGERNEPRLL-----EIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMG---IGGEEKGVDGLDGRRLLG------DWDCTLESLW--------LGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672
            R VVA +    G  ++   A A+V      +C  C  +  A   L RC  CR+  YC  +CQR+DW +G H +EC  +        K +PP    T  + +L +L  R   RL         +S  E  ++L  H ED + +Q  ++  +A +V  ++       E   V  L+ R L          +C   SL         LG+FP+ AL+NHAC   C VSF    R  ++ IR V  GE LTI+Y+
Sbjct:   25 RCVVATKRLRRGTTLLVAPAFAAV---STTSCNACFAT-DATASLLRCSGCRLARYCSRQCQRRDWSDGMHALECVAW--------KSVPPHCRNTAAQTILLVL--RLTARLWFRSPSSSSSSDHEDVLALRHHVEDHSTSQLREFEDMARLVLALLARSKFNAEGLDVSTLETRHLRDVVLLFCRVNCNAFSLCDDVNRATGLGVFPRAALLNHACAPTCVVSFEPSARARLQLIRDVDAGEELTISYV 261          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3P9NLW2_POERE (SET and MYND domain containing 1 n=1 Tax=Poecilia reticulata TaxID=8081 RepID=A0A3P9NLW2_POERE)

HSP 1 Score: 83.2 bits (204), Expect = 7.930e-15
Identity = 72/233 (30.90%), Postives = 103/233 (44.21%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVD------GLDGRRLLGDWDCT-LESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672
            RG+ A REF +GEV++ E   A+V    L  + C  C R      +L RC  CR   YC   CQ   W++ H  ECA   K         P         LL  RN  + L  D+  L +   L+DH  D    Q     A           G ++   D      GL     L   D   L+++ LGLFP ++L+NH C  NC+ +   G ++ +R + R++ GE LTI+Y+
Sbjct:   11 RGLRASREFSTGEVLLAEPGYAAVVYSSLASQVCHSCFRRQA---NLHRCAQCRFAHYCNRTCQTAGWDD-HRQECAAIRKLGA-----APNEDVRLAGRLLWRRNRDQGLASDSQLLAVD-QLQDHLRDLPEDQLGALQADVQTFLRFWSCGSKQHPADFIGHVFGLIKSNGLTLPDQRGLQTVGLGLFPNLSLVNHDCWPNCTATLNHG-KMELRALGRIRQGEELTISYV 232          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3Q2FLV5_CYPVA (SET and MYND domain containing 1 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2FLV5_CYPVA)

HSP 1 Score: 79.0 bits (193), Expect = 2.260e-13
Identity = 75/266 (28.20%), Postives = 105/266 (39.47%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDC----------------------TL------ESLWLGLFPKVALMNHACDANCSVSFREGGRVVV------------RTIRRVKCGEPLTITYI 672
            RG+ A+R+  +GEV+  E + A+V  + L  + C  C R      +L RC  CR   YC   CQ   W++ H  ECA   KS       +P         LL  RN  + L  D S L     L+DH  D             +  GE+  +         LD R  L  W C                      TL      ES+ LGLFP ++L+NH C  NC+ +   G R  V            R + ++  GE LT++Y+
Sbjct:   16 RGLRARRDINTGEVLFAEPSYAAVVFNSLASQVCHSCFRRQA---NLHRCAQCRFAHYCDRTCQTAGWDD-HKQECAAIRKSGS-----VPNENVRLAARLLWRRNRDQGLASD-SQLVPVDQLQDHLTD-------------LPAGELEKLE--------LDVRNFLRFWSCGTKQHPSEYISHIFGIIKFNGLTLQDQRGQESVGLGLFPNLSLVNHDCWPNCTATLNHGNRSAVSSTLHSPLRMELRALGKISEGEELTVSYV 250          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A3Q2QYQ3_FUNHE (Histone-lysine N-methyltransferase SMYD1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QYQ3_FUNHE)

HSP 1 Score: 77.0 bits (188), Expect = 1.060e-12
Identity = 69/248 (27.82%), Postives = 105/248 (42.34%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDG-RRLLGDWDCT---------LESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTI----RRVKC--------GEPLTITYI 672
            RG+ A +EF  G+V+  E ++++V  D L  R C  C R     E L+RCG C+   YC   CQR  W   H  EC+   K++ K      P     L+  +  R +     +    L     LEDH  D    Q+     L + +   +           +D    + G  +C          L+++ +GLFP + L+NH C  NC+V    G +  V TI    RR++         GE LT+ Y+
Sbjct:   14 RGLKATKEFWPGDVIFSEPSLSAVVFDSLAERICHSCFRR---QEKLQRCGQCKFAHYCDRTCQRAGWAE-HKQECSAI-KAYGK-----APNENIRLVARIMWRLDKEGSVVSDMQLTTLDELEDHLNDM---QEDDLKELKVDIHNFLDYWPRTSKQHTIDDISHIFGVINCNGFSVSDQRGLQTVGVGLFPNLCLVNHDCWPNCTVILNHGSQSAVNTIFHSQRRIELRPLDKIAEGEELTVAYV 248          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: F1QDG9_DANRE (SET and MYND domain-containing 1a n=6 Tax=Bilateria TaxID=33213 RepID=F1QDG9_DANRE)

HSP 1 Score: 73.9 bits (180), Expect = 1.170e-11
Identity = 70/249 (28.11%), Postives = 100/249 (40.16%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQL--RTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEIDTSPLELFVSLEDHC-----EDAN------LTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSV------------SFREGGRVVVRTIRRVKCGEPLTITYI 672
            RG+   R+  +GEVV  E + A+V +D L  + C  C R    P    RC  C+   YC   CQR  W+  H  EC+      K       P     L+  +  R +     +  S L     LEDH      ED         T    W   +  VGE         GV   +G  L       L+S+ +GLFP + L+NH C  NC+V            SF    R+ +R +  +  G+ LT++Y+
Sbjct:   19 RGLRGTRDLSAGEVVFAEASFAAVVLDSLSLQVCHSCFRRQVNPH---RCAQCKFAHYCDRTCQRAAWDE-HRKECSAIRNIGK------APNENVRLVARILWRIQKHTGLVSDSQLTTLDMLEDHLSRMTPEDLKELKVDVKTFYTYWPKKSKAVGE--DYVSHLFGVISCNGFTLSDQRG--LQSVGIGLFPNLCLVNHDCWPNCTVILNHGDQSALDASFHSSRRIELRALEPISAGQELTVSYV 253          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A507ED68_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ED68_9FUNG)

HSP 1 Score: 73.9 bits (180), Expect = 1.390e-11
Identity = 74/267 (27.72%), Postives = 111/267 (41.57%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASV----PMDQLRTCAGCLRS-------------FGAPEDLKRC---GCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIP------PTRYEALLPLLGERNEPRLLEIDT-----SPLELFVSLEDH----------CEDANLTQKAQW--HALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672
            R VVA      G +VV E+A A V     MD+L  C  C+R              FG+  + K     GC +   YC  EC   D E  H++EC V         + +P       T Y  +  +LG      L  + T     +P E    L  H          C +A     AQ+    L++   E++ +          +   ++     T + + +G+FP VA++NHAC  NCS      GR++VRT+R V+ GE L +TY+
Sbjct:   27 RHVVASESLPKGTLVVSEDAAAFVLLKASMDEL--CLRCVRPLDEGDSKDQQQSLFGSAGNSKGVVCKGCIKQTYYCSSECMDSDHER-HSLECEVV--------RHLPGITAMHSTDYALMRLVLGVLVNRHLETVATMPSTRTPTEFVFDLVSHRKTCDPKWLACVEACADDFAQYLPEHLSIPASEIVTLACRINS----NSHAMVDPTGNTNQEVGVGMFPMVAMLNHACAPNCSFVSTTHGRMIVRTLRDVQAGEELCVTYV 278          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A7S1V479_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V479_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.510e-11
Identity = 65/232 (28.02%), Postives = 105/232 (45.26%), Query Frame = 1
Query:   34 GEVVVEEEAVA-SVPMDQLRTCAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKS-------WKKRRKRIPPTRYEALLPLLGERNEPRLLEIDT-SPLELFVSLEDHCEDA------NLTQKAQWHALAMVVGEVMGIGG-EEKGVDGLDGR---RLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672
            G V+     +A S+ +D   TCA C   F  P  L RC  C+ + YC  ECQ KD+   H  ECA  +K        W+             LL   GE  + +  + D  + ++  V    H  D       N  Q   + +LA V+ +V+       + ++G+  R      G  +    ++  G++P  AL+NH+CD NC + +REG  + + T+R ++ GE LT +Y+
Sbjct:   33 GTVISRNPPLAHSLLVDLESTCAYC---FAKPPKLFRCSKCQTLRYCGRECQSKDFAQ-HKWECAYRSKRNGCSGGRWEDSTAEQHHQELILLLRTYGELQQCKKRKRDQCTKIDDLVQCGSHHWDEMVLAPKNREQSLTYSSLASVLTDVLPNSWLNPQHIEGVLRRFQANNFGIVNAMHATIGQGVYPHGALLNHSCDPNCLLRYREGTTMEIVTLRPIEAGEELTHSYV 260          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: A0A507E2R6_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507E2R6_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-10
Identity = 72/267 (26.97%), Postives = 110/267 (41.20%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASV----PMDQLRTCAGCLRS-------------FGAPEDLKRC---GCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIP------PTRYEALLPLLGERNEPRLLEIDT-----SPLELFVSLEDH----------CEDANLTQKAQW--HALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYI 672
            R V+A      G +VV EE+ A V     MD+L  C  C+R              FG+  + K     GC +   YC  EC   D E  H++EC V         + +P       T Y  +  +LG      L  + T     +P E    L  H          C +A      Q+    L++   E++ +          +   ++     T + + +G+FP VA++NHAC  NCS      GR++VRT+R V+ GE L +TY+
Sbjct:   27 RHVMASESLPKGTLVVSEESAAFVLLKASMDEL--CLRCVRPLDEGDSKGQQQSLFGSAGNSKGVVCGGCIKQTYYCSSECMNSDHER-HSLECEVV--------RHLPGITAMHSTDYALMRLVLGVLVNRYLETVATMPSTRTPTEFVFDLVSHRKTCDPKWLACVEACADDFVQYLPEHLSIPASEIVTLACRINS----NSHAMVDPTGNTNQEVGVGMFPMVAMLNHACAPNCSFVSTTHGRMIVRTLRDVEAGEELCVTYV 278          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: T0S3J6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3J6_SAPDV)

HSP 1 Score: 70.5 bits (171), Expect = 1.740e-10
Identity = 67/247 (27.13%), Postives = 107/247 (43.32%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASVPMDQLRT--CAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVEC------AVFAKSWKKRRKRIPPTRYEALLPLLGERNEPRLLEI-DTSPLELFVSLED----HCEDANLTQ------KAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLW---LGLFPKVALMNHACDANCSVSFR-EGGRVVVRTIRRVKCGEPLTITYI 672
            R + A ++   G +++     A+V    L T  C  C      P  L RC  C++V YC + CQ  DW   H +EC       V A ++      +   R   L+      NEPR L+   T P +L  S  D    H   A + Q            L  + G ++G+G     ++ +  R    ++  T E L     G +P  A++NH+CDANC+V+F  +   + +R +R +  GE +T  Y+
Sbjct:   14 RWIAATKDVAPGTLLLTSMPFATVLSPSLWTERCQACFE----PGSLARCARCKLVYYCSKGCQLSDWRLQHKLECPRLERLVVTANAYSVVADALLIARTLRLVSASPAPNEPRNLDARSTHPYDLVWSEADRAAVHATAAIVDQTDLLPSSTTTLRLKPLTGAMLGMGYTVSDIEEMLCRFHTNNFTITDEILLDIGSGCYPWGAMVNHSCDANCTVTFAPKSHELQMRALRPIAAGEEVTHAYM 256          
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Match: B3RNQ6_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RNQ6_TRIAD)

HSP 1 Score: 69.7 bits (169), Expect = 3.200e-10
Identity = 58/234 (24.79%), Postives = 106/234 (45.30%), Query Frame = 1
Query:    1 RGVVAQREFVSGEVVVEEEAVASV-PMDQLRT-CAGCLRSFGAPEDLKRCGCCRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEAL----LPLLGERNEPRLLEIDTSPLELFVSLEDHC--EDANLTQKAQWHALAMVVGEVMGIGGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFREGGRVVVRTIRRVKCGEPLTITYIPP 678
            RG+  +++   G  V +E     V   D L + C  CL       +L +C  C+++ YCC+ CQ++DW+  H  EC    +   K    +PP     L      +L  ++     +   S  EL      +   +  NL ++   + +A+   E++ I                   +  ++++ +G++P ++L+NH+C  NCS +FR G ++ +R I   K G+ L I+YI P
Sbjct:   21 RGIRCKKQLAIGTSVGKENPFCHVVSQDMLSSYCHSCLLM---QSELYKCSRCKIIMYCCKSCQKEDWQ-WHKYECKSITRLGPK----VPPDSIRLLGRVAYTILQGQDRADQFKFLLSNRELLEGSRKNTIVDGINLLKEYLSNKVAINENEIIEIISRVT-------CNTFTICNSEMQTVGIGVYPGLSLVNHSCSPNCSATFR-GKQMQLRIIENTKIGDELLISYIDP 238          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86969.20221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4BRN0_PYTIN6.910e-1630.68Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3P9NLW2_POERE7.930e-1530.90SET and MYND domain containing 1 n=1 Tax=Poecilia ... [more]
A0A3Q2FLV5_CYPVA2.260e-1328.20SET and MYND domain containing 1 n=2 Tax=Cyprinodo... [more]
A0A3Q2QYQ3_FUNHE1.060e-1227.82Histone-lysine N-methyltransferase SMYD1-like n=1 ... [more]
F1QDG9_DANRE1.170e-1128.11SET and MYND domain-containing 1a n=6 Tax=Bilateri... [more]
A0A507ED68_9FUNG1.390e-1127.72SET domain-containing protein n=1 Tax=Chytriomyces... [more]
A0A7S1V479_9STRA5.510e-1128.02Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A507E2R6_9FUNG1.050e-1026.97SET domain-containing protein n=1 Tax=Chytriomyces... [more]
T0S3J6_SAPDV1.740e-1027.13Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
B3RNQ6_TRIAD3.200e-1024.79Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86969contigM-pyrifera_M_contig86969:33..836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.5
Seed ortholog evalue3.4e-17
Seed eggNOG ortholog42099.EPrPV00000017888
KEGG koko:K11426
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0019538,GO:0031974,GO:0031981,GO:0032259,GO:0034968,GO:0036211,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.Source PGD
EggNOG OGs1MD0Q@121069,COG2940@1,KOG2084@2759
COG Functional cat.B
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons3
Model size687
Cds size687
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86969.20221.1prot_M-pyrifera_M_contig86969.20221.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86969 33..836 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816779.051055-CDS-M-pyrifera_M_contig86969:32..3051622816779.051055-CDS-M-pyrifera_M_contig86969:32..305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 33..305 +
1692278173.561538-CDS-M-pyrifera_M_contig86969:32..3051692278173.561538-CDS-M-pyrifera_M_contig86969:32..305Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 33..305 +
1622816779.067207-CDS-M-pyrifera_M_contig86969:344..5721622816779.067207-CDS-M-pyrifera_M_contig86969:344..572Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 345..572 +
1692278173.5739443-CDS-M-pyrifera_M_contig86969:344..5721692278173.5739443-CDS-M-pyrifera_M_contig86969:344..572Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 345..572 +
1622816779.0806074-CDS-M-pyrifera_M_contig86969:650..8361622816779.0806074-CDS-M-pyrifera_M_contig86969:650..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 651..836 +
1692278173.5880508-CDS-M-pyrifera_M_contig86969:650..8361692278173.5880508-CDS-M-pyrifera_M_contig86969:650..836Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86969 651..836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86969.20221.1

>prot_M-pyrifera_M_contig86969.20221.1 ID=prot_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
RGVVAQREFVSGEVVVEEEAVASVPMDQLRTCAGCLRSFGAPEDLKRCGC
CRVVGYCCEECQRKDWENGHNVECAVFAKSWKKRRKRIPPTRYEALLPLL
GERNEPRLLEIDTSPLELFVSLEDHCEDANLTQKAQWHALAMVVGEVMGI
GGEEKGVDGLDGRRLLGDWDCTLESLWLGLFPKVALMNHACDANCSVSFR
EGGRVVVRTIRRVKCGEPLTITYIPPHRP
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mRNA from alignment at M-pyrifera_M_contig86969:33..836+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86969.20221.1 ID=mRNA_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig86969:33..836+ (Macrocystis pyrifera P11B4 male)
AGAGGTGTGGTAGCACAGAGAGAGTTTGTGAGTGGGGAGGTGGTGGTGGA GGAAGAGGCTGTAGCAAGTGTACCAATGGATCAATTGAGGACTTGCGCTG GATGCTTACGCTCGTTTGGGGCTCCTGAGGATTTGAAGAGGTGTGGGTGT TGTCGAGTGGTGGGGTATTGTTGTGAGGAGTGTCAGAGGAAGGATTGGGA AAATGGACATAACGTAGAATGCGCAGTATTTGCGAAAAGTTGGAAGAAGA GGAGAAAACGCATCCCTCCGACGGTGCACTTGGTTGTGCGTGTGTTGATG ATGATTAAAGAGAGATATGAGGCGTTGTTACCGTTACTAGGAGAACGAAA TGAACCTCGGTTGTTGGAAATTGATACTTCCCCATTGGAATTGTTCGTTT CTCTGGAGGATCATTGTGAAGATGCAAATTTGACCCAAAAAGCACAATGG CATGCATTGGCTATGGTGGTAGGGGAAGTGATGGGGATTGGAGGGGAGGA GAAGGGAGTGGATGGGTTGGATGGGAGAAGGCTGTTGGGAGTGATTGGGA GAATTGTGTGTAATGCGTTGGCTGGTAGTGATTTTGGATATGAAGTTGGT GTGGGGGAAGGGGGAAAGGATTGGGATTGTACTTTGGAAAGTTTATGGCT TGGTTTGTTTCCAAAAGTGGCATTGATGAATCATGCCTGTGATGCGAATT GTTCTGTGTCGTTTCGAGAAGGAGGGAGAGTTGTGGTGAGAACAATTCGA CGTGTGAAATGTGGTGAACCCTTAACCATCACGTACATCCCACCCCACCG CCCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86969:33..836+

>mRNA_M-pyrifera_M_contig86969.20221.1 ID=mRNA_M-pyrifera_M_contig86969.20221.1|Name=mRNA_M-pyrifera_M_contig86969.20221.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig86969:33..836+ (Macrocystis pyrifera P11B4 male)
AGAGGTGTGGTAGCACAGAGAGAGTTTGTGAGTGGGGAGGTGGTGGTGGA
GGAAGAGGCTGTAGCAAGTGTACCAATGGATCAATTGAGGACTTGCGCTG
GATGCTTACGCTCGTTTGGGGCTCCTGAGGATTTGAAGAGGTGTGGGTGT
TGTCGAGTGGTGGGGTATTGTTGTGAGGAGTGTCAGAGGAAGGATTGGGA
AAATGGACATAACGTAGAATGCGCAGTATTTGCGAAAAGTTGGAAGAAGA
GGAGAAAACGCATCCCTCCGACGAGAGGTGTGGTAGCACAGAGAGAGTTT
GTGAGTGGGGAGGTGGTGGTGGAGGAAGAGGCTGTAGCAAGTGTACCAAT
GGATCAATTGAGGACTTGCGCTGGATGCTTACGCTCGTTTGGGGCTCCTG
AGGATTTGAAGAGGTGTGGGTGTTGTCGAGTGGTGGGGTATTGTTGTGAG
GAGTGTCAGAGGAAGGATTGGGAAAATGGACATAACGTAGAATGCGCAGT
ATTTGCGAAAAGTTGGAAGAAGAGGAGAAAACGCATCCCTCCGACGAGAT
ATGAGGCGTTGTTACCGTTACTAGGAGAACGAAATGAACCTCGGTTGTTG
GAAATTGATACTTCCCCATTGGAATTGTTCGTTTCTCTGGAGGATCATTG
TGAAGATGCAAATTTGACCCAAAAAGCACAATGGCATGCATTGGCTATGG
TGGTAGGGGAAGTGATGGGGATTGGAGGGGAGGAGAAGGGAGTGGATGGG
TTGGATGGGAGAAGGCTGTTGGGAAGATATGAGGCGTTGTTACCGTTACT
AGGAGAACGAAATGAACCTCGGTTGTTGGAAATTGATACTTCCCCATTGG
AATTGTTCGTTTCTCTGGAGGATCATTGTGAAGATGCAAATTTGACCCAA
AAAGCACAATGGCATGCATTGGCTATGGTGGTAGGGGAAGTGATGGGGAT
TGGAGGGGAGGAGAAGGGAGTGGATGGGTTGGATGGGAGAAGGCTGTTGG
GAGATTGGGATTGTACTTTGGAAAGTTTATGGCTTGGTTTGTTTCCAAAA
GTGGCATTGATGAATCATGCCTGTGATGCGAATTGTTCTGTGTCGTTTCG
AGAAGGAGGGAGAGTTGTGGTGAGAACAATTCGACGTGTGAAATGTGGTG
AACCCTTAACCATCACGTACATCCCACCCCACCGCCCAGATTGGGATTGT
ACTTTGGAAAGTTTATGGCTTGGTTTGTTTCCAAAAGTGGCATTGATGAA
TCATGCCTGTGATGCGAATTGTTCTGTGTCGTTTCGAGAAGGAGGGAGAG
TTGTGGTGAGAACAATTCGACGTGTGAAATGTGGTGAACCCTTAACCATC
ACGTACATCCCACCCCACCGCCCA
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