mRNA_M-pyrifera_M_contig86954.20216.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A1Y1HK86_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK86_KLENI) HSP 1 Score: 60.5 bits (145), Expect = 2.150e-8 Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 28 SVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQLVPPVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVL 315 S DL+ ++ +A LH+PE + + RY F + + K GE A +L+PP+DV W HL+ P+ YR++CE+L GR + +V+ Sbjct: 74 SDDLVARARAQVKFLAAVEGANQLHAPENALKIVRRYARF---WLPLLAKHGESA--ELMPPLDVEWAWHCHLLNPLAYRAECEQLAGRVLDHSVI 164
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A067GTI0_CITSI (Uncharacterized protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067GTI0_CITSI) HSP 1 Score: 56.6 bits (135), Expect = 1.590e-7 Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 34 DLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQ--LVPPVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVLFSEV 327 DL+ A + LQ +A + L+ L+R++ RY A + + K E + LV P+D +W H + P+ Y+SDCEEL+G+ + + + S + Sbjct: 25 DLVAAAKQQLQFLAAVDRNRWLYEGPALQRAIYRYN---ACWLPLLAKHSESHISKGCLVVPLDCEWIWHCHRLNPVQYKSDCEELYGKNLDNSYVVSSI 121
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: V4RX40_CITCL (Uncharacterized protein n=1 Tax=Citrus clementina TaxID=85681 RepID=V4RX40_CITCL) HSP 1 Score: 56.2 bits (134), Expect = 6.750e-7 Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 34 DLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQ--LVPPVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVLFSEV 327 DL+ A + LQ +A + L+ L+R++ RY A + + K E + LV P+D +W H + P+ Y+SDCEEL+G+ + + + S + Sbjct: 23 DLVAAAKQQLQFLAAVDRNRWLYEGPTLQRAIYRYN---ACWLPLLAKHSESHISKGCLVVPLDCEWIWHCHRLNPVQYKSDCEELYGKNLDNSYVVSSI 119
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: V4SFT2_CITCL (Uncharacterized protein n=6 Tax=Citrus TaxID=2706 RepID=V4SFT2_CITCL) HSP 1 Score: 56.2 bits (134), Expect = 6.950e-7 Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 34 DLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQ--LVPPVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVLFSEV 327 DL+ A + LQ +A + L+ L+R++ RY A + + K E + LV P+D +W H + P+ Y+SDCEEL+G+ + + + S + Sbjct: 23 DLVAAAKQQLQFLAAVDRNRWLYEGPTLQRAIYRYN---ACWLPLLAKHSESHISKGCLVVPLDCEWIWHCHRLNPVQYKSDCEELYGKNLDNSYVVSSI 119
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: UPI0009E1CC59 (glycine-rich domain-containing protein 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1CC59) HSP 1 Score: 55.8 bits (133), Expect = 9.400e-7 Identity = 34/106 (32.08%), Postives = 51/106 (48.11%), Query Frame = 1 Query: 7 APKPLHFSVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELF---MALYCSVTEKEGEEAAKQLVPPVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVL 315 A K FS+DL+ A Q + A L++ ++ ++ RYELF + SVTE + P+DVA VW H++ PI+Y DC E+ V +L Sbjct: 2 AEKTAQFSIDLVEAALKHRQFLQLVDAYPSLYAGPHVQNAIRRYELFWLPLLAQSSVTE--------DIAAPLDVAWVWHVHMLSPISYEKDCNEVVSTLVDHKIL 99
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A3M6TIG4_POCDA (Uncharacterized protein (Fragment) n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TIG4_POCDA) HSP 1 Score: 52.0 bits (123), Expect = 1.540e-5 Identity = 28/106 (26.42%), Postives = 49/106 (46.23%), Query Frame = 1 Query: 22 HFSVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQLVP-----PVDVAHVWRAHLIRPITYRSDCEELFGRQVSPAVLFSE 324 F +DL+ A LQ + L++ + ++ RYELF + + + K +P P+D+A VW H++ P++Y+ DC E+ V +L E Sbjct: 8 QFGIDLVEAAIAQLQFLRIVDDYPSLYAGPHVRNAIRRYELF---WLPLLAQNATRIKKWFIPLNIAAPLDIAWVWHVHMLSPVSYQRDCNEIVATLVDHKILVGE 110
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A6P5A292_BRABE (uncharacterized protein LOC109478672 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A292_BRABE) HSP 1 Score: 50.8 bits (120), Expect = 5.350e-5 Identity = 27/97 (27.84%), Postives = 48/97 (49.48%), Query Frame = 1 Query: 10 PKPLHFSVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMALYCSVTEKEGEEAAKQLVPPVDVAHVWRAHLIRPITYRSDCEELFGRQV 300 PK + DL++A + L + E L+ ++ +L RYE L+ + + G K L PP+D+ VW H++ P+ Y +DC + G+ + Sbjct: 7 PKKIRIGTDLIKAAKYQLGFLKEVDRHPMLYEGPHVDNALRRYE---KLWLPLVARLG---TKGLSPPLDIHWVWHVHMLAPLHYEADCNNIVGKLI 97
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A2K3DGI8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DGI8_CHLRE) HSP 1 Score: 50.4 bits (119), Expect = 7.630e-5 Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 97 LHSPECLERSLVRYEL-FMALYCSVTEKEGEEAAK------QLVPPVDVAHVWRAH-LIRPITYRSDCEELFGRQVSPA 309 L+S +++ +RYEL ++ L + + A+ +LVPP+DVAHVW H ++ P Y DC L GR++ PA Sbjct: 54 LYSGHYAQQAALRYELCWLPLAARAAAAQEAKRARGGRPFPELVPPLDVAHVWLLHRILDPAAYEQDCVRLLGRRLDPA 132
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Match: A0A8J9VXR4_BRALA (Hypp5581 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VXR4_BRALA) HSP 1 Score: 50.1 bits (118), Expect = 9.980e-5 Identity = 25/98 (25.51%), Postives = 48/98 (48.98%), Query Frame = 1 Query: 10 PKPLHFSVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYE-LFMALYCSVTEKEGEEAAKQLVPPVDVAHVWRAHLIRPITYRSDCEELFGRQV 300 PK +H DL++ + L + E L+ ++ ++ RYE L++ L G + PP+D+ VW H++ P+ Y++DC + G+ + Sbjct: 7 PKHIHIGTDLIKVAKYQLGFLKEVDQHPVLYDGPHVDNAIRRYEKLWLPLV-------GRVGTSGMSPPLDIHWVWHVHMLAPLHYQADCNNIVGKLI 97 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86954.20216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86954.20216.1 >prot_M-pyrifera_M_contig86954.20216.1 ID=prot_M-pyrifera_M_contig86954.20216.1|Name=mRNA_M-pyrifera_M_contig86954.20216.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp VEAPKPLHFSVDLLRACETLLQCIAEFGALKDLHSPECLERSLVRYELFMback to top mRNA from alignment at M-pyrifera_M_contig86954:48..374- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86954.20216.1 ID=mRNA_M-pyrifera_M_contig86954.20216.1|Name=mRNA_M-pyrifera_M_contig86954.20216.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig86954:48..374- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86954:48..374- >mRNA_M-pyrifera_M_contig86954.20216.1 ID=mRNA_M-pyrifera_M_contig86954.20216.1|Name=mRNA_M-pyrifera_M_contig86954.20216.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig86954:48..374- (Macrocystis pyrifera P11B4 male)back to top |