mRNA_M-pyrifera_M_contig86817.20189.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86817.20189.1
Unique NamemRNA_M-pyrifera_M_contig86817.20189.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A2E0IQM5_9HYPH (Uncharacterized protein n=1 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E0IQM5_9HYPH)

HSP 1 Score: 327 bits (839), Expect = 1.630e-108
Identity = 164/281 (58.36%), Postives = 199/281 (70.82%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADD-AVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DP  E N+LYF+G L + V   P  ALN G T E VLDP P TDR  GD GLY+DTLNL+AS G  +L  GKF P FG+AWD+TPG+YGT+ AEDYELSEM+G G A      A G +T G N+F VDTTVLS+S FT RGRTTLADGG ANT  LDNFSFTIDG +IAA+PG ++N GYR+LS G  +   E+GF AG+ Q I L N   ++LNGE+AY  N    +DD A Y+T GL  V GPWHGE+AG+LR  D+S GG+ +D  +Q+SAGY +ENG
Sbjct:   51 DPTAEINDLYFSGALGMKVGLTPIFALNLGLTAESVLDPAPSTDRAFGDIGLYVDTLNLEASLGMLTLVAGKFGPSFGSAWDITPGVYGTSFAEDYELSEMIGIGSAIAFETGATGTITLGGNVFFVDTTVLSDSAFTSRGRTTLADGGLANTESLDNFSFTIDGTDIAAMPGFSYNFGYRHLSAGVTETADEDGFAAGLAQEIELSNGDLVVLNGEVAYFSNYGGVSDDDATYLTAGLGYVHGPWHGEVAGSLRLIDYSGGGSDDDHLIQVSAGYEFENG 331          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A443JG63_9RHOB (Uncharacterized protein n=1 Tax=Sinirhodobacter populi TaxID=2306993 RepID=A0A443JG63_9RHOB)

HSP 1 Score: 310 bits (793), Expect = 1.130e-101
Identity = 155/280 (55.36%), Postives = 192/280 (68.57%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DPD E  +++ T ELA+ +      ALNFG T E VLDP PG DR  GD GLY+DTLN++   G  +LT GKFA GFGTAWD  PGI+G+ LAEDYEL+E LGFGLA+ +    +G +TFG N+FT DT+ LS+S FT+RGR T ADGGA NTG+L+N S T+DG +IAA PGL+W+LGYR L PG GD  +E G V G+ Q + L N  EL + GE+A L N     D A Y T G+   RGPWHGE+A + R+T    GG++ DS VQIS GY WENG
Sbjct:   46 DPDAELTDVFGTAELALRLRLTKGAALNFGATAESVLDPRPGKDRTFGDIGLYIDTLNVEVEAGPVTLTAGKFAAGFGTAWDTMPGIWGSDLAEDYELAEQLGFGLAWDLGETPVGALTFGVNLFTADTSALSDSAFTKRGRLTRADGGAGNTGKLNNVSLTLDGADIAAAPGLSWHLGYRELKPGLGDSATERGMVFGLAQALDLGNGTELTVVGEVARLRNVGGGDDRADYATLGIGFARGPWHGEIAASTRKTRLGAGGSERDSLVQISGGYTWENG 325          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A1L3SY65_9HYPH (Uncharacterized protein n=2 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3SY65_9HYPH)

HSP 1 Score: 308 bits (790), Expect = 1.290e-101
Identity = 155/281 (55.16%), Postives = 194/281 (69.04%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATA-DDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DP  E ++LYF GEL + +   P  A+NFG T E VLDP P  DR  GD GLY+DTLNL+A  G A+L  GKF P FGTAWD+TPG+YGT  AEDYELSE +GFG  Y     A G  T G ++F VDTT LS+S+FT RGR  + DGG  NT +L+NFS T+DG ++ ALPG ++NLGYR+LS G  +   E+GFVAG+ +  AL + + L LNGEIAY  +A   A DDA+Y T GL +  GPWHGELAGT+R+ DF+  G+  D  VQ+SAGY +ENG
Sbjct:   13 DPGAEVDDLYFLGELGVKLGLTPIFAINFGLTAESVLDPEPFKDRAFGDIGLYVDTLNLEAKLGAATLFAGKFGPAFGTAWDITPGVYGTEFAEDYELSEQIGFGATYEFDAGAAGKHTLGGHVFFVDTTFLSDSIFTRRGRVGIGDGGIGNTEKLNNFSITLDGTDLEALPGFSYNLGYRHLSAGVTETADEDGFVAGLAKETALASGMVLGLNGEIAYFSDAAGLAGDDALYTTVGLSVANGPWHGELAGTVRRLDFAGAGSTRDHLVQVSAGYGFENG 293          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A5E7ZGW5_9HYPH (Uncharacterized protein n=1 Tax=Hoeflea sp. EC-HK425 TaxID=2038388 RepID=A0A5E7ZGW5_9HYPH)

HSP 1 Score: 304 bits (779), Expect = 1.980e-99
Identity = 151/280 (53.93%), Postives = 187/280 (66.79%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DP  E  +LY    LA+ ++   +LA N G T EPVLDP   TDRY GDHGLY+DTLN+Q    G     GKF PGFGTAWDVTPGIYGT  AEDYELSEM+GFG AY     A G +T G N+F +D T LS S FT+RGR   + GG  NTGRL+NFS T+DG +I A+ GL W+LGY +L  G GD+++ NGF AG+V+   L N V +  N EIAY   A  + D A+Y+TGGL + +GPWHGE + TLR+T++  GG  ND   Q+S GY +ENG
Sbjct:   50 DPTAEITDLYAEAALAVKLNAANWLAFNLGLTFEPVLDPQASTDRYFGDHGLYVDTLNIQIENAGFIAVAGKFGPGFGTAWDVTPGIYGTGFAEDYELSEMVGFGTAYAFDAGAPGVITIGGNVFFMDDTFLSGSAFTKRGRNLASAGGPGNTGRLNNFSLTVDGSDIPAVEGLNWHLGYVHLGAGAGDISAVNGFAAGLVRETELGNGVAIGWNTEIAYFDGANGSKDKALYLTGGLSVAKGPWHGEASATLRRTNYFAGGRDNDLLAQVSGGYEFENG 329          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: UPI00155806B4 (hypothetical protein n=1 Tax=Xinfangfangia sp. D13-10-4-6 TaxID=2737662 RepID=UPI00155806B4)

HSP 1 Score: 300 bits (769), Expect = 4.860e-98
Identity = 150/280 (53.57%), Postives = 185/280 (66.07%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DPD    + + +   A+ +     +ALNFG T E VLDP P TDR  GD GLY+DTLNL+A  G  +LT GKF  GFGTAWD  PGI+   LAEDYEL+E LG GL++ +    +G +T G N+FT DTT LS+S  T RGR T ADGGA NTGRL+N S T+DG ++ A PGL+W+LGYR L PG GD+ SE G V G+ QT  L N  EL + GE+A L NA  +ADDA + T GL L RG WHGELA + R+     GG+  D+ VQIS GY W+NG
Sbjct:   46 DPDARLTDTFGSAAFALRLRMTDGIALNFGATAEAVLDPRPATDRTFGDIGLYIDTLNLEAEIGPVTLTAGKFGAGFGTAWDTMPGIWSADLAEDYELAEQLGVGLSWDLGATPLGSLTLGVNLFTADTTTLSDSALTRRGRLTRADGGAGNTGRLNNVSLTLDGSDLEAAPGLSWHLGYRQLKPGIGDIASERGMVFGLAQTFELGNGTELTVAGEVARLRNAGGSADDADHATLGLGLARGAWHGELAASSRRLTLGAGGSARDTLVQISGGYTWDNG 325          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: UPI001C69B1E4 (hypothetical protein n=1 Tax=Hoeflea sp. WL0058 TaxID=2865987 RepID=UPI001C69B1E4)

HSP 1 Score: 264 bits (675), Expect = 4.410e-83
Identity = 139/280 (49.64%), Postives = 177/280 (63.21%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DPD EFN LY T   A  +    +  +  G T E + DP    D Y  D GLY+DT++LQA  GG SL  GK+ P FG AWD TPG+YGT+LAEDYE++EM+  G AY       G  T  AN F  DTTVLS SL T RGR +L+DGG+ANT R +N++  + GEE+AALPGL++NLG+ YLS G GDV  + G+V G+       N V + + GE+AY  N   T DD  Y T GL+L  G WHGELAG LR  +   GG+Q+ SF+Q+S GY ++NG
Sbjct:   81 DPDAEFNNLYPTIGFAAELGLNQYFKVVVGLTMEQLEDP--EEDSYFEDVGLYMDTIHLQADVGGLSLLAGKYGPEFGQAWDNTPGLYGTSLAEDYEITEMIALGFAYDFELGDAGTHTLAANTFFADTTVLSESLITNRGRVSLSDGGSANTERFNNYAVALSGEEMAALPGLSYNLGFTYLSAGIGDVADQTGYVFGLAYENEYANGVTMNVTGEVAYFNNIGGTLDDGTYFTAGLELGNGSWHGELAGALRDINLDGGGSQDTSFIQLSGGYEFDNG 358          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A1M2Z0V7_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 65-79 TaxID=1895815 RepID=A0A1M2Z0V7_9HYPH)

HSP 1 Score: 231 bits (589), Expect = 1.120e-70
Identity = 133/281 (47.33%), Postives = 161/281 (57.30%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELA-IAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            +P NEFN LY  G  A   +      ++N G T E V  P P  D  +   GLY+DTL+LQA  G  + T GK+ P FG AWDVTPG +G+  AEDYEL+E +  G AY     + G  T   N F  DTTV S SLF  RGR    DGGA NTG+ DNFS T+ GEEI  L G  +N+GYR+ +  E D   ENGFV G+ +   + N V L L GE+AY  +    ADDA YVT G  L RGPWHGEL G+ R  DF T    ND  V  S GY ++ G
Sbjct:   59 NPANEFNNLYMHGSTAAFKLGLTQVFSVNLGLTLEQVKGPFPPEDCTMCGIGLYMDTLDLQADVGNWTFTAGKYEPAFGFAWDVTPGPWGSRYAEDYELTERMALGAAYTFD-TSFGKHTLAVNTFFADTTVFSESLFNNRGRLHDYDGGAGNTGKFDNFSVTLAGEEIPGLEGFKYNIGYRHQTGTESDAGDENGFVIGLAKDTEIGNGVTLGLIGELAYFEHYTGAADDATYVTVGSSLKRGPWHGELTGSFR--DFET----NDRLVAASVGYEFDGG 332          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A2H6J1T3_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6J1T3_9BACT)

HSP 1 Score: 199 bits (505), Expect = 6.620e-58
Identity = 117/284 (41.20%), Postives = 163/284 (57.39%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFG-GASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGE--GDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVT-GGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            DPD E  + Y T EL + V F  FL      T EPVLDP PG DR+  DHGLY + L      G G  + GGKF P FG AWD+ PG+YG   AEDYE++E LGFG +      A+G +T   +++ VDTT LS S+FT+RG+T+++DGG +NT  +D+F+  +D  E+ AL G   +  YR+   G+   D+  E+GF A +  + +L N V     GE+ YL NA  T D+  Y T GG+      ++  L+ T R  D S GG  +D  +Q+S G  + +G
Sbjct:   71 DPDAELTDTYNTTELGVEVTFNRFLIGRGAFTFEPVLDPGPGEDRFFEDHGLYAEELYGAVVLGHGVGVFGGKFNPAFGQAWDIAPGVYGANFAEDYEITERLGFGGSIEREDTALGTLTLTGSVYHVDTTELSRSVFTDRGKTSVSDGGVSNTEDMDSFALALDAAEVPALAGANLHFAYRFQHQGKTVDDLEDEHGFAAAVYGSRSL-NGVGFEWIGEVVYLDNAEGTRDELWYYTAGGVVTFANKYNIALSYTGRPRDVSGGGDLDDKLLQVSTGVEFSSG 353          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: A0A369TCW3_9PROT (Uncharacterized protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TCW3_9PROT)

HSP 1 Score: 196 bits (497), Expect = 5.120e-57
Identity = 118/285 (41.40%), Postives = 158/285 (55.44%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFG--LAYGVPGLA---IGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            D D E N+LY T E   +      L+L  G   EPV DP PG DR   DHGLY + L +  S  G  + GGKF P FGTAWD+ PGIYGT LAEDYE++E +G G  L +G  GL     G     AN F  DTT LS S+ T+RG    ADGG +NT    +FS T+DGE  ++ P + ++LG ++   G GD   + GFVAG+  + AL  +  +    E+A         +D  Y+T G  ++ GPW+  ++ T R TD   G   +D  +Q+SAGY + NG
Sbjct:   44 DSDAELNDLYTTTEPYFSFKATRQLSLEAGFVLEPVQDPDPGDDRVFEDHGLYAEELYVNYSGDGFDVYGGKFNPSFGTAWDIAPGIYGTDLAEDYEITERIGAGGALVFGEGGLGGEGFGTHRLAANTFFADTTFLSESVITDRGELDEADGGVSNTEDFSSFSVTLDGEGFSSAP-IGYHLGVQHQEAGVGDSDDQTGFVAGLNGSFALGEDTAVEPLIEVAAFDGFDGGDEDRNYLTTGATVLHGPWNAAVSYTGRFTDAGGGNDTDDGQIQLSAGYAFANG 327          
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Match: UPI000E5D6A2B (hypothetical protein n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D6A2B)

HSP 1 Score: 195 bits (495), Expect = 7.220e-57
Identity = 116/283 (40.99%), Postives = 156/283 (55.12%), Query Frame = 1
Query:    1 DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDHGLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSEMLGFGLAYGVPGLA---IGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGAANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGIVQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELAGTLRQTDFSTGGAQNDSFVQISAGYLWENG 840
            D D E N+L+ T E +I +  +  +A+  G   EPV D     DRY  DHGLY++ L L+ S     + GGKF P FG AWD+ PGI+G   AEDYEL+E LG G+A G        +G V   ANIF  D ++LS S+   RG   L +GGA NT     FS T+DG ++AALPGL+++LG R+ + GE +   E+G V G+VQ   +       L GE AY  +  A  ++AVYVT G     G W+  + G LR T         D   Q+SAGY ++ G
Sbjct:   38 DSDAELNDLFATVEPSIRIEPVEHVAIVSGLVLEPVRDA--DDDRYFEDHGLYVEQLFLEYSDDWGRVFGGKFNPSFGVAWDLAPGIFGVDFAEDYELTEQLGGGVALGFGNARNAYLGVVEVSANIFLADRSLLSESVINGRGNLDLDEGGAGNTKGPGAFSLTLDGSDVAALPGLSYHLGLRFRAGGEDEDGDESGLVFGLVQAFEIDENQTFELIGEAAYFSDFDAGEEEAVYVTLGGAYYLGNWNVAVVGALRDTALGDSAVDTDHLAQVSAGYAFDFG 318          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86817.20189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0IQM5_9HYPH1.630e-10858.36Uncharacterized protein n=1 Tax=Ahrensia sp. TaxID... [more]
A0A443JG63_9RHOB1.130e-10155.36Uncharacterized protein n=1 Tax=Sinirhodobacter po... [more]
A0A1L3SY65_9HYPH1.290e-10155.16Uncharacterized protein n=2 Tax=Aquibium oceanicum... [more]
A0A5E7ZGW5_9HYPH1.980e-9953.93Uncharacterized protein n=1 Tax=Hoeflea sp. EC-HK4... [more]
UPI00155806B44.860e-9853.57hypothetical protein n=1 Tax=Xinfangfangia sp. D13... [more]
UPI001C69B1E44.410e-8349.64hypothetical protein n=1 Tax=Hoeflea sp. WL0058 Ta... [more]
A0A1M2Z0V7_9HYPH1.120e-7047.33Uncharacterized protein n=1 Tax=Rhizobiales bacter... [more]
A0A2H6J1T3_9BACT6.620e-5841.20Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A369TCW3_9PROT5.120e-5741.40Uncharacterized protein n=1 Tax=Ferruginivarius se... [more]
UPI000E5D6A2B7.220e-5740.99hypothetical protein n=1 Tax=Algihabitans albus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86817contigM-pyrifera_M_contig86817:2..841 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score182.6
Seed ortholog evalue2.6e-43
Seed eggNOG ortholog1089552.KI911559_gene2675
Hectar predicted targeting categoryother localisation
EggNOG OGs1R4F2@1224,2BVRA@1,2JUG6@204441,2U0VD@28211,2Z7NJ@2
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
Exons1
Model size840
Cds size840
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816777.4399807-CDS-M-pyrifera_M_contig86817:1..8411622816777.4399807-CDS-M-pyrifera_M_contig86817:1..841Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86817 2..841 -
1692278172.4686725-CDS-M-pyrifera_M_contig86817:1..8411692278172.4686725-CDS-M-pyrifera_M_contig86817:1..841Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86817 2..841 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86817.20189.1prot_M-pyrifera_M_contig86817.20189.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86817 2..841 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86817.20189.1

>prot_M-pyrifera_M_contig86817.20189.1 ID=prot_M-pyrifera_M_contig86817.20189.1|Name=mRNA_M-pyrifera_M_contig86817.20189.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
DPDNEFNELYFTGELAIAVHFLPFLALNFGTTTEPVLDPLPGTDRYLGDH
GLYLDTLNLQASFGGASLTGGKFAPGFGTAWDVTPGIYGTALAEDYELSE
MLGFGLAYGVPGLAIGDVTFGANIFTVDTTVLSNSLFTERGRTTLADGGA
ANTGRLDNFSFTIDGEEIAALPGLTWNLGYRYLSPGEGDVTSENGFVAGI
VQTIALQNEVELILNGEIAYLVNAMATADDAVYVTGGLQLVRGPWHGELA
GTLRQTDFSTGGAQNDSFVQISAGYLWENG
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mRNA from alignment at M-pyrifera_M_contig86817:2..841-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86817.20189.1 ID=mRNA_M-pyrifera_M_contig86817.20189.1|Name=mRNA_M-pyrifera_M_contig86817.20189.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig86817:2..841- (Macrocystis pyrifera P11B4 male)
GATCCGGACAATGAATTCAACGAACTCTATTTCACTGGAGAGCTGGCGAT TGCCGTGCATTTCCTGCCCTTTCTCGCCCTCAATTTTGGAACGACAACGG AACCGGTGCTTGATCCGCTGCCCGGTACGGACCGTTATCTCGGCGATCAC GGCCTCTATCTGGACACGTTGAACCTGCAGGCGAGTTTTGGAGGCGCCAG CCTCACCGGCGGCAAGTTCGCACCCGGTTTCGGGACCGCGTGGGATGTCA CGCCCGGCATCTACGGAACAGCGCTTGCTGAAGATTATGAACTCTCCGAA ATGCTCGGCTTCGGCCTGGCTTACGGTGTGCCGGGTCTGGCGATCGGCGA TGTCACGTTCGGCGCCAATATTTTTACCGTCGACACGACCGTGCTGTCGA ATTCGCTCTTTACGGAGAGGGGCCGCACAACCCTTGCGGATGGTGGAGCG GCAAACACCGGCAGGCTCGACAATTTCTCCTTCACCATTGACGGCGAAGA GATTGCCGCCCTTCCGGGACTGACCTGGAACCTCGGCTATCGTTATCTTT CCCCCGGTGAAGGCGATGTCACTTCGGAAAACGGCTTTGTCGCCGGCATC GTACAGACAATCGCGCTTCAGAACGAAGTCGAGTTGATTTTGAACGGCGA AATTGCCTATCTGGTCAACGCGATGGCGACGGCGGACGACGCGGTTTACG TTACCGGTGGTCTTCAGTTGGTCCGGGGGCCATGGCATGGGGAGCTTGCC GGCACACTGCGCCAAACCGATTTCAGCACCGGCGGCGCGCAGAATGACAG TTTTGTCCAGATATCGGCGGGCTATCTATGGGAAAACGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86817:2..841-

>mRNA_M-pyrifera_M_contig86817.20189.1 ID=mRNA_M-pyrifera_M_contig86817.20189.1|Name=mRNA_M-pyrifera_M_contig86817.20189.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig86817:2..841- (Macrocystis pyrifera P11B4 male)
GATCCGGACAATGAATTCAACGAACTCTATTTCACTGGAGAGCTGGCGAT
TGCCGTGCATTTCCTGCCCTTTCTCGCCCTCAATTTTGGAACGACAACGG
AACCGGTGCTTGATCCGCTGCCCGGTACGGACCGTTATCTCGGCGATCAC
GGCCTCTATCTGGACACGTTGAACCTGCAGGCGAGTTTTGGAGGCGCCAG
CCTCACCGGCGGCAAGTTCGCACCCGGTTTCGGGACCGCGTGGGATGTCA
CGCCCGGCATCTACGGAACAGCGCTTGCTGAAGATTATGAACTCTCCGAA
ATGCTCGGCTTCGGCCTGGCTTACGGTGTGCCGGGTCTGGCGATCGGCGA
TGTCACGTTCGGCGCCAATATTTTTACCGTCGACACGACCGTGCTGTCGA
ATTCGCTCTTTACGGAGAGGGGCCGCACAACCCTTGCGGATGGTGGAGCG
GCAAACACCGGCAGGCTCGACAATTTCTCCTTCACCATTGACGGCGAAGA
GATTGCCGCCCTTCCGGGACTGACCTGGAACCTCGGCTATCGTTATCTTT
CCCCCGGTGAAGGCGATGTCACTTCGGAAAACGGCTTTGTCGCCGGCATC
GTACAGACAATCGCGCTTCAGAACGAAGTCGAGTTGATTTTGAACGGCGA
AATTGCCTATCTGGTCAACGCGATGGCGACGGCGGACGACGCGGTTTACG
TTACCGGTGGTCTTCAGTTGGTCCGGGGGCCATGGCATGGGGAGCTTGCC
GGCACACTGCGCCAAACCGATTTCAGCACCGGCGGCGCGCAGAATGACAG
TTTTGTCCAGATATCGGCGGGCTATCTATGGGAAAACGGGGATCCGGACA
ATGAATTCAACGAACTCTATTTCACTGGAGAGCTGGCGATTGCCGTGCAT
TTCCTGCCCTTTCTCGCCCTCAATTTTGGAACGACAACGGAACCGGTGCT
TGATCCGCTGCCCGGTACGGACCGTTATCTCGGCGATCACGGCCTCTATC
TGGACACGTTGAACCTGCAGGCGAGTTTTGGAGGCGCCAGCCTCACCGGC
GGCAAGTTCGCACCCGGTTTCGGGACCGCGTGGGATGTCACGCCCGGCAT
CTACGGAACAGCGCTTGCTGAAGATTATGAACTCTCCGAAATGCTCGGCT
TCGGCCTGGCTTACGGTGTGCCGGGTCTGGCGATCGGCGATGTCACGTTC
GGCGCCAATATTTTTACCGTCGACACGACCGTGCTGTCGAATTCGCTCTT
TACGGAGAGGGGCCGCACAACCCTTGCGGATGGTGGAGCGGCAAACACCG
GCAGGCTCGACAATTTCTCCTTCACCATTGACGGCGAAGAGATTGCCGCC
CTTCCGGGACTGACCTGGAACCTCGGCTATCGTTATCTTTCCCCCGGTGA
AGGCGATGTCACTTCGGAAAACGGCTTTGTCGCCGGCATCGTACAGACAA
TCGCGCTTCAGAACGAAGTCGAGTTGATTTTGAACGGCGAAATTGCCTAT
CTGGTCAACGCGATGGCGACGGCGGACGACGCGGTTTACGTTACCGGTGG
TCTTCAGTTGGTCCGGGGGCCATGGCATGGGGAGCTTGCCGGCACACTGC
GCCAAACCGATTTCAGCACCGGCGGCGCGCAGAATGACAGTTTTGTCCAG
ATATCGGCGGGCTATCTATGGGAAAACGGG
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