mRNA_M-pyrifera_M_contig86816.20188.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7S4MPS0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPS0_9EUKA) HSP 1 Score: 120 bits (301), Expect = 2.860e-30 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 19 WSVEDTQALLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLYW 303 W + + LL +C +VG+HPDQA EG+VDF L PFA++PCC+Y+KQF ++K SG QV DLV+HL KHP+IR + F+GKNT++YW Sbjct: 300 WGWAELRELLENCSCIVGMHPDQAAEGIVDFALRMKKPFALIPCCVYSKQFPRKKTPSGAQVSNYQDLVDHLRAKHPDIRTMKMPFEGKNTIVYW 394
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7J6STP5_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6STP5_PEROL) HSP 1 Score: 103 bits (257), Expect = 1.030e-26 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 28 EDTQALLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 E +L+ LVVGLH DQATE +VDF LA G PFAVVPCC+Y K F RKL G+ V T ++ + +L K P IR +TL F G+NT +Y Sbjct: 4 ETALEVLADASLVVGLHSDQATERIVDFALAAGKPFAVVPCCVYQKCFPDRKLPDGQLVSTYEEFITYLCSKDPRIRTQTLGFDGRNTAVY 94
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7J6QY46_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QY46_PEROL) HSP 1 Score: 105 bits (262), Expect = 1.770e-26 Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 22 SVEDTQA---LLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 S++D + +L+ LVVGLH DQATE +VDF LA G PFAVVPCC+Y K F RKL G+ V T +D + +L K P IR +TL F G+NT +Y Sbjct: 82 SIDDFETALEVLADASLVVGLHSDQATERIVDFALAAGKPFAVVPCCVYQKCFPDRKLPDGQLVNTYEDFITYLCSKDPRIRTQTLGFDGRNTAVY 177
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A059LGA5_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LGA5_9CHLO) HSP 1 Score: 102 bits (255), Expect = 1.900e-26 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 43 LLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLYWLGP 312 LL C +VVG+HPDQATE VD LA G P+AVVPCC+Y + + G+ VR+ D VE+L K P +R L F+GKNTV+YW+GP Sbjct: 4 LLQRCSVVVGMHPDQATEPAVDLALALGRPWAVVPCCVYGGARGRPRRLDGRLVRSHGDFVEYLRRKAPGVRVAKLPFEGKNTVVYWMGP 93
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7S4IQ74_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IQ74_9EUKA) HSP 1 Score: 108 bits (271), Expect = 2.660e-26 Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 25 VEDTQALLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLYWLG 309 +E LL + G ++G+HPDQATE +VD+ L G PFAVVPCC+ +KQF+KR G+ V+T + LV H+ KHP+IR TL F+GKNTVLY G Sbjct: 249 LEYVSKLLQNFGCIIGMHPDQATEAIVDYALLQGKPFAVVPCCVCSKQFTKRT-HDGETVKTYEHLVSHIQTKHPDIRVATLPFEGKNTVLYHHG 342
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A812IQF4_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IQF4_SYMPI) HSP 1 Score: 99.4 bits (246), Expect = 4.830e-25 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 37 QALLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 +ALLS+ +VVGLHPD+ATE +VD L G FAVVPCC++ ++F +R+LA G VRT++ +L K+P I+ L+F+G+N VLY Sbjct: 12 EALLSNASVVVGLHPDEATESIVDLALKAGRRFAVVPCCVFAEKFPRRELAPGVPVRTLNQFCAYLRAKNPRIKEALLDFEGRNKVLY 99
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A061QXC6_9CHLO (Zinc finger-containing protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QXC6_9CHLO) HSP 1 Score: 98.6 bits (244), Expect = 6.560e-25 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 52 SCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 +C +VVG+HPDQATE LVD LA G PFAVVPCC++ + F RK A GK V + +D +E+L+ K P+ R L F+G+N V++ Sbjct: 2 NCSVVVGMHPDQATEPLVDLALALGKPFAVVPCCVHGRSFPGRKTACGKPVVSYEDFIEYLLSKSPDCRSAELPFEGRNKVVF 84
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: C5KTN4_PERM5 (C3H1-type domain-containing protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KTN4_PERM5) HSP 1 Score: 103 bits (257), Expect = 5.690e-24 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 22 SVEDTQA---LLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 S++D Q +LS+ LVVGLH DQATE +VDF LA G PFAVVPCC+Y K F RKL +G+ V T D+ + ++ K P IR + L F G+N +Y Sbjct: 317 SIDDLQTALEVLSNASLVVGLHSDQATERIVDFALAAGKPFAVVPCCVYQKCFPDRKLPNGQLVNTYDEFITYICAKDPRIRTQALGFDGRNIAVY 412
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7J6SGC6_PEROL (C3H1-type domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SGC6_PEROL) HSP 1 Score: 103 bits (257), Expect = 7.630e-24 Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 22 SVEDTQA---LLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLY 300 S++D + +L+ LVVGLH DQATE +VDF LA G PFAVVPCC+Y K F RKL G+ V T +D + +L K P IR + L F G+NT +Y Sbjct: 354 SIDDFETALEVLADASLVVGLHSDQATERIVDFALAAGKPFAVVPCCVYQKCFPDRKLPDGQLVNTYEDFITYLCSKDPRIRTQALGFDGRNTAVY 449
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Match: A0A7S0PVW9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PVW9_MICPS) HSP 1 Score: 95.9 bits (237), Expect = 2.450e-23 Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 1 HTAAIEWSVEDTQA--LLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCCIYTKQFSKRKLASGKQVRTVDDLVEHLMEKHPEIRRETLNFQGKNTVLYWL 306 H A+ W D ++ C ++VG+HPDQATE +VD +A G PFAVVPCC++ + F R+ A G VRT + V++L+ KHP+ + L F+G+N V+Y L Sbjct: 26 HLASEFWGETDGPLGEAIARCDVLVGMHPDQATEPVVDAAIALGKPFAVVPCCVFPELFPARRTADGSPVRTYVEFVDYLVAKHPDAKLAYLPFKGRNRVVYRL 129 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86816.20188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86816.20188.1 >prot_M-pyrifera_M_contig86816.20188.1 ID=prot_M-pyrifera_M_contig86816.20188.1|Name=mRNA_M-pyrifera_M_contig86816.20188.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp HTAAIEWSVEDTQALLSSCGLVVGLHPDQATEGLVDFCLATGTPFAVVPCback to top mRNA from alignment at M-pyrifera_M_contig86816:428..739+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86816.20188.1 ID=mRNA_M-pyrifera_M_contig86816.20188.1|Name=mRNA_M-pyrifera_M_contig86816.20188.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig86816:428..739+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86816:428..739+ >mRNA_M-pyrifera_M_contig86816.20188.1 ID=mRNA_M-pyrifera_M_contig86816.20188.1|Name=mRNA_M-pyrifera_M_contig86816.20188.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig86816:428..739+ (Macrocystis pyrifera P11B4 male)back to top |