mRNA_M-pyrifera_M_contig86567.20142.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86567.20142.1
Unique NamemRNA_M-pyrifera_M_contig86567.20142.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A3D1GBA4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GBA4_9BACT)

HSP 1 Score: 409 bits (1052), Expect = 4.210e-134
Identity = 193/256 (75.39%), Postives = 225/256 (87.89%), Query Frame = 1
Query:   10 EAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGY---TVDGTD-WRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            +A A +   NFDDFQPEKI+T+E+GYK+LI NRLF+DAYYY+S YTDFIAE++FTQGIPNGL+  P A Y   T  GTD W++S+IT +DPNNPN SFPTQ+YGFDVNADG V SHGFAVTADYSL+GGYTIGGN+SYNKL+DQ++L++QGFRASYNTPEWRYNV+FQNRKLT  IGFNL YRWQDAY+WESSIGEGVV AFGTLDAQVSY+L+ +N+ IK+GGSNILNE+YTTSLANP +GAIYYVSFT DQ L 
Sbjct:  671 DAMAMVTEFNFDDFQPEKISTYEVGYKTLISNRLFIDAYYYFSNYTDFIAEVTFTQGIPNGLKQAPGAEYSGATAPGTDSWKQSVITQQDPNNPNSSFPTQSYGFDVNADGNVRSHGFAVTADYSLNGGYTIGGNLSYNKLLDQEDLLAQGFRASYNTPEWRYNVRFQNRKLTKNIGFNLTYRWQDAYVWESSIGEGVVDAFGTLDAQVSYRLSRFNSTIKVGGSNILNEQYTTSLANPTMGAIYYVSFTLDQLLK 926          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A2D8CGS2_9BACT (Uncharacterized protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CGS2_9BACT)

HSP 1 Score: 349 bits (896), Expect = 7.680e-111
Identity = 164/255 (64.31%), Postives = 201/255 (78.82%), Query Frame = 1
Query:    1 TTAEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            + A+A A+L+AV F++F+ EK+ T+ELGYKS++ +RL +DAYYYYS+YTDFIAEI F QG+PNGL  +P A +  D    +++II G           TQ YGFDVNADGTV+SHG+ V  D SL  G+ +GGNVSYNKL+DQD+LI QGFRASYNTPEWRYNV+F+NR++ D +GF L YRWQDA+ WESS G  VVPA+GTLD Q+SYKLNDYNTI+KLGGSN+LNERYTTS  NP +GAIYY S TFDQFLN
Sbjct:  697 SAADARAALEAVEFEEFETEKVQTYELGYKSMLFDRLMVDAYYYYSSYTDFIAEIQFVQGVPNGLAEDPGA-FDSDSDAGKDAIING--------GVVTQEYGFDVNADGTVNSHGWGVNLDLSLPKGFVVGGNVSYNKLLDQDDLIDQGFRASYNTPEWRYNVRFENREVVDNLGFGLTYRWQDAFFWESSFGAAVVPAYGTLDGQISYKLNDYNTILKLGGSNLLNERYTTSFGNPKMGAIYYFSVTFDQFLN 942          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: UPI001F090E78 (TonB-dependent receptor n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI001F090E78)

HSP 1 Score: 339 bits (870), Expect = 7.640e-107
Identity = 159/255 (62.35%), Postives = 192/255 (75.29%), Query Frame = 1
Query:    1 TTAEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            T AEA A L  + FDDF+ EKI+T+E+GYK+L+ +RLF+DAYYYYS Y DFIAEI F QG+PNGL  +P   +  D    ++ II G          PTQ YGFDVNADG V S GF V+ +YSLDGGY +GGN SYN LI + +LI QGFRASYNTP+WRYNV+ +NR + + +GFN+VYRWQDAY W+SS G GVVPA+GTLDAQVSYK+    TI+K+GGSN+LNERYTTS  NP +GAIYY S TFDQFLN
Sbjct:  718 TDAEARAVLVPIEFDDFKTEKISTYEVGYKALVTDRLFVDAYYYYSVYKDFIAEIQFVQGVPNGLTNDP-GSFDADSDSGKDQIING--------GVPTQEYGFDVNADGNVESQGFGVSLEYSLDGGYKVGGNASYNDLISEKDLIKQGFRASYNTPKWRYNVRLENRNVIENVGFNMVYRWQDAYFWDSSFGAGVVPAYGTLDAQVSYKIPSAKTILKIGGSNVLNERYTTSFGNPKMGAIYYFSLTFDQFLN 963          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A5D3YHS9_9BACT (TonB-dependent Receptor Plug Domain n=2 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YHS9_9BACT)

HSP 1 Score: 337 bits (864), Expect = 4.060e-106
Identity = 159/255 (62.35%), Postives = 201/255 (78.82%), Query Frame = 1
Query:    1 TTAEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            + + A   L+ V F+D + EK++T+E+GYKSLI +RL +DAYYYYS+Y+DFIAEI FTQ IPNGLR +P   +  +    +++II        NQ+ PTQ YG+DVNADGTV S GFAV  +Y+L+GGY IGGNV+YN LI Q++L  QGFRASYNTPEWRYN+K +NRKLTD +GFN+VYRWQDA++WESS G G+V ++GTLDAQVSY L+ YNT IKL GSNILN++YTTS+ NP +GAIY +SFTFDQFLN
Sbjct:  699 SASAARGLLEPVQFEDLKTEKVSTYEVGYKSLIADRLLVDAYYYYSSYSDFIAEIDFTQAIPNGLRQDP-GSFDPNSNSGQDAII--------NQTVPTQRYGYDVNADGTVESQGFAVEMEYALNGGYKIGGNVAYNDLISQEDLTQQGFRASYNTPEWRYNLKVENRKLTDNVGFNVVYRWQDAFLWESSYGSGIVDSYGTLDAQVSYTLSKYNTRIKLSGSNILNQKYTTSIGNPRIGAIYLLSFTFDQFLN 944          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A6A8Q7C6_9BACT (TonB-dependent receptor n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q7C6_9BACT)

HSP 1 Score: 335 bits (858), Expect = 2.860e-105
Identity = 156/253 (61.66%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    7 AEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            AEA + L+AV FD+F+ EKI T+E+GYK+ I ++L +D YYYYSAYTDFIAEI F QG+PNGL+ +P   +  +    ++ II G           TQ YGFD+NADGTV++HGF V+ DY+L  GY + GNVS+N+LIDQD+LI QGFRASYNTPEWRYN++F+NR++ D +GFN  YRWQDA+ WESS G  VVPA+GTLDAQ SYKL  YNTI+K GGSN+LNERYTTS  NP +GAIYY S TFD+FLN
Sbjct:  697 AEARSKLEAVEFDEFKTEKIETYEVGYKAFIIDKLLVDVYYYYSAYTDFIAEIQFVQGVPNGLKEDP-GDFDANSNAGKDQIING--------GVLTQEYGFDINADGTVNAHGFGVSLDYTLPKGYHLAGNVSFNELIDQDDLIDQGFRASYNTPEWRYNIRFENREVIDNLGFNFTYRWQDAFFWESSFGAAVVPAYGTLDAQFSYKLPAYNTILKFGGSNVLNERYTTSFGNPKMGAIYYFSITFDEFLN 940          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: UPI000372DB3C (TonB-dependent receptor n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000372DB3C)

HSP 1 Score: 333 bits (855), Expect = 8.660e-105
Identity = 156/255 (61.18%), Postives = 196/255 (76.86%), Query Frame = 1
Query:    1 TTAEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            + A+A A+L+AV F++F  EKI T+E+GYK+ + ++L +DAYYYYS+Y DFIAEI F QG+PNGL  +P   +  D    +++II G           TQ YGFDVNADG V+SHG+ +  +YSL  G+ IGGNV+YNKL+DQD+LI+QGFRASYNTPEWRYNVK +NR + + +GFN  YRWQDA +WESS G  VVPAFGTLDAQ SYKL++YNTI+K+GGSN+LNERYTTS  NP +GAIYY S TFDQFLN
Sbjct:  700 SAAQARAALEAVAFEEFDTEKIQTYEVGYKAFLWDKLMVDAYYYYSSYRDFIAEIQFVQGVPNGLTNDP-GSFDADSDAGKDAIING--------GVLTQEYGFDVNADGNVNSHGWGLNLEYSLPKGFLIGGNVTYNKLLDQDDLIAQGFRASYNTPEWRYNVKLENRSIIENLGFNATYRWQDAMLWESSFGSAVVPAFGTLDAQFSYKLSNYNTILKVGGSNVLNERYTTSFGNPKMGAIYYFSITFDQFLN 945          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A1B6Y5S9_9BACT (Uncharacterized protein n=3 Tax=unclassified Balneola TaxID=2615059 RepID=A0A1B6Y5S9_9BACT)

HSP 1 Score: 331 bits (849), Expect = 7.610e-104
Identity = 159/253 (62.85%), Postives = 189/253 (74.70%), Query Frame = 1
Query:    7 AEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            A A A L+AV FDDF+ EKI+T+E+GYK  + +RL +DAYYYYS YTDFIAEI F QGIPNGL  +P A +  D    ++ II G           TQ +GFDVNADG V S GF V+ DYS DGGY +GGNV+YN+LI + +L  QGFR+SYNTP+WRYNV+ +NR   + IGFN+VYRWQDAY W+SS G+GVVPA+GTLDAQ+SYKL   NTI+K GGSNILNERY TS  NP LGAIYY S TFDQFLN
Sbjct:  710 AAARAMLEAVEFDDFKTEKISTYEVGYKGFVTDRLLVDAYYYYSQYTDFIAEIQFVQGIPNGLTEDPGA-FDADSDAGKDDIIQG--------GVDTQEFGFDVNADGEVKSQGFGVSMDYSFDGGYKLGGNVAYNELISEQDLRDQGFRSSYNTPKWRYNVRLENRNFIENIGFNMVYRWQDAYYWDSSFGDGVVPAYGTLDAQISYKLPSANTILKFGGSNILNERYETSFGNPTLGAIYYFSLTFDQFLN 953          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: UPI001F091C18 (TonB-dependent receptor n=1 Tax=Tunicatimonas sp. TK19036 TaxID=2867963 RepID=UPI001F091C18)

HSP 1 Score: 327 bits (837), Expect = 2.860e-102
Identity = 160/254 (62.99%), Postives = 195/254 (76.77%), Query Frame = 1
Query:    7 AEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIP-NGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            A + A L  V FD+F  EK+NTFE+GYK LI N+L +DAYYYYSAY DFIAEI FTQ +  NGL   P AG      +  E I+         Q+  TQ +GFDVNA GTV++HGFA + DYSL+ GYT+GGNVSYN L+DQD+LI QGFRASYNTPEWRYN++F NRKLTD +GFN+V+RWQDA++WESS GEG++PA+ TLDAQVSYKL    +I+K+GGSN+LNERYTTS  NP +GA+YY+S TFDQFLN
Sbjct:  692 AASVALLNPVEFDEFTTEKVNTFEVGYKGLINNKLLIDAYYYYSAYRDFIAEIDFTQTVTSNGL--PPYAGE-----ENPEGIVQ--------QTVATQRFGFDVNAGGTVNAHGFAASLDYSLNQGYTVGGNVSYNNLLDQDDLIQQGFRASYNTPEWRYNLRFANRKLTDHVGFNIVWRWQDAFLWESSFGEGIIPAYQTLDAQVSYKLPAIKSIVKVGGSNVLNERYTTSFGNPSMGALYYISITFDQFLN 930          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A345UG06_9BACT (Fe transport outer membrane receptor protein n=1 Tax=Candidatus Cyclonatronum proteinivorum TaxID=1457365 RepID=A0A345UG06_9BACT)

HSP 1 Score: 325 bits (834), Expect = 1.090e-101
Identity = 153/253 (60.47%), Postives = 196/253 (77.47%), Query Frame = 1
Query:   10 EAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAG-YTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            +A A LQ V FD+F+ EKI+T E+GY+ L GNRL++DAYYYYS Y DF+AEI FTQGIPNGLR  PD   +  +    +++II        N++ PTQ +GFDVNADG V +HGFAV ADYSL  GYT+GGNV+YN+LI  D L  QGF A +NTP+WRYN+  +NR + + +GFN+ +RWQDA++W+S+IG+GV+PAFGTLDAQVSY++ + NT++K  GSNILNERYTTS ANP +GAIY V+FTFDQFLN
Sbjct:  704 QARALLQPVVFDEFKTEKISTVEVGYRGLFGNRLYIDAYYYYSEYRDFLAEIDFTQGIPNGLREMPDLSQFDPNSAAGQDAII--------NRTVPTQRFGFDVNADGVVKAHGFAVGADYSLGQGYTVGGNVTYNELISADRLEEQGFSAGFNTPKWRYNLSLRNRNVGNNVGFNVSWRWQDAFVWDSAIGQGVIPAFGTLDAQVSYRIPNMNTVVKFSGSNILNERYTTSFANPSMGAIYLVTFTFDQFLN 948          
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Match: A0A371QR55_9BACT (TonB-dependent receptor n=2 Tax=Rhodohalobacter sp. SW132 TaxID=2293433 RepID=A0A371QR55_9BACT)

HSP 1 Score: 323 bits (827), Expect = 8.050e-101
Identity = 153/252 (60.71%), Postives = 193/252 (76.59%), Query Frame = 1
Query:   10 EAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTDFIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQTYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQGFRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPAFGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTFDQFLN 765
            EA   L+ V+F+ F+ EK+ TFELGYKSLI NRLFLDAYYYY+ Y DFIAEI F QG+PNG+R +P   +     D ++ II        NQ+  TQ +G ++NADGTV SHGFAV A+YSL  GY IGGNVS+N+LI Q +L+ QGFRAS+NTP++RYN+ F NR++T  IGFN+ +RWQDA+ WES+ GEGV+PAFGT+DAQVS++L  YN+I+K GGSN+LN RY TS+ NP +GAIYYVS TFDQ LN
Sbjct:  686 EARNLLEGVDFEPFRTEKVTTFELGYKSLIRNRLFLDAYYYYNIYEDFIAEIEFMQGVPNGIRQDP-GSFDGGSADGQDEII--------NQTVATQRFGININADGTVRSHGFAVGAEYSLPRGYNIGGNVSFNELISQQDLLDQGFRASFNTPKYRYNLSFANRRVTQNIGFNMTWRWQDAFQWESTFGEGVIPAFGTMDAQVSFRLPAYNSILKFGGSNVLNNRYETSIGNPTMGAIYYVSLTFDQLLN 928          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86567.20142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GBA4_9BACT4.210e-13475.39Uncharacterized protein (Fragment) n=1 Tax=Balneol... [more]
A0A2D8CGS2_9BACT7.680e-11164.31Uncharacterized protein n=2 Tax=Balneolaceae TaxID... [more]
UPI001F090E787.640e-10762.35TonB-dependent receptor n=1 Tax=Balneola vulgaris ... [more]
A0A5D3YHS9_9BACT4.060e-10662.35TonB-dependent Receptor Plug Domain n=2 Tax=Fodini... [more]
A0A6A8Q7C6_9BACT2.860e-10561.66TonB-dependent receptor n=1 Tax=Balneolaceae bacte... [more]
UPI000372DB3C8.660e-10561.18TonB-dependent receptor n=1 Tax=Gracilimonas tropi... [more]
A0A1B6Y5S9_9BACT7.610e-10462.85Uncharacterized protein n=3 Tax=unclassified Balne... [more]
UPI001F091C182.860e-10262.99TonB-dependent receptor n=1 Tax=Tunicatimonas sp. ... [more]
A0A345UG06_9BACT1.090e-10160.47Fe transport outer membrane receptor protein n=1 T... [more]
A0A371QR55_9BACT8.050e-10160.71TonB-dependent receptor n=2 Tax=Rhodohalobacter sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86567contigM-pyrifera_M_contig86567:5..772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score339.7
Seed ortholog evalue1.2e-90
Seed eggNOG ortholog1121104.AQXH01000001_gene1448
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TonB-dependent receptor plug domain
EggNOG OGs1IPS9@117747,4NDX3@976,COG1629@1,COG4771@2
COG Functional cat.P
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
Exons1
Model size768
Cds size768
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816775.0199249-CDS-M-pyrifera_M_contig86567:4..7721622816775.0199249-CDS-M-pyrifera_M_contig86567:4..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86567 5..772 +
1692278171.011291-CDS-M-pyrifera_M_contig86567:4..7721692278171.011291-CDS-M-pyrifera_M_contig86567:4..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86567 5..772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86567.20142.1prot_M-pyrifera_M_contig86567.20142.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86567 5..772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86567.20142.1

>prot_M-pyrifera_M_contig86567.20142.1 ID=prot_M-pyrifera_M_contig86567.20142.1|Name=mRNA_M-pyrifera_M_contig86567.20142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
TTAEAAASLQAVNFDDFQPEKINTFELGYKSLIGNRLFLDAYYYYSAYTD
FIAEISFTQGIPNGLRTEPDAGYTVDGTDWRESIITGEDPNNPNQSFPTQ
TYGFDVNADGTVSSHGFAVTADYSLDGGYTIGGNVSYNKLIDQDELISQG
FRASYNTPEWRYNVKFQNRKLTDKIGFNLVYRWQDAYIWESSIGEGVVPA
FGTLDAQVSYKLNDYNTIIKLGGSNILNERYTTSLANPLLGAIYYVSFTF
DQFLN*
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mRNA from alignment at M-pyrifera_M_contig86567:5..772+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86567.20142.1 ID=mRNA_M-pyrifera_M_contig86567.20142.1|Name=mRNA_M-pyrifera_M_contig86567.20142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig86567:5..772+ (Macrocystis pyrifera P11B4 male)
ACCACCGCTGAGGCAGCAGCTTCTCTTCAGGCAGTTAACTTTGATGATTT CCAACCAGAGAAAATTAATACGTTTGAACTTGGTTACAAAAGCTTAATAG GAAACAGATTGTTTCTTGATGCATACTATTACTATAGTGCATATACTGAT TTCATCGCCGAAATATCTTTCACACAAGGAATTCCAAATGGCTTAAGAAC GGAGCCCGACGCTGGATATACAGTTGACGGGACAGATTGGCGTGAATCTA TCATCACGGGTGAAGATCCTAATAATCCAAATCAATCATTTCCAACTCAA ACCTACGGCTTTGATGTAAATGCCGATGGTACAGTAAGTTCACATGGATT TGCAGTAACTGCAGATTATTCTTTAGATGGCGGTTATACCATTGGTGGAA ATGTTTCCTACAATAAGTTAATCGATCAGGATGAACTAATTAGTCAAGGA TTTAGAGCAAGTTATAATACTCCTGAATGGAGATATAACGTAAAATTCCA GAATAGAAAGCTAACCGATAAAATTGGATTCAATCTAGTTTATAGATGGC AAGATGCATATATCTGGGAATCTTCTATCGGAGAGGGTGTTGTTCCTGCT TTTGGGACCTTAGATGCACAAGTAAGCTACAAGCTTAATGATTACAATAC GATTATAAAACTTGGGGGGAGTAATATCTTAAATGAGCGATATACTACTT CACTAGCCAATCCACTATTAGGAGCCATTTATTATGTCTCTTTCACTTTC GATCAATTCCTGAACTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86567:5..772+

>mRNA_M-pyrifera_M_contig86567.20142.1 ID=mRNA_M-pyrifera_M_contig86567.20142.1|Name=mRNA_M-pyrifera_M_contig86567.20142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig86567:5..772+ (Macrocystis pyrifera P11B4 male)
ACCACCGCTGAGGCAGCAGCTTCTCTTCAGGCAGTTAACTTTGATGATTT
CCAACCAGAGAAAATTAATACGTTTGAACTTGGTTACAAAAGCTTAATAG
GAAACAGATTGTTTCTTGATGCATACTATTACTATAGTGCATATACTGAT
TTCATCGCCGAAATATCTTTCACACAAGGAATTCCAAATGGCTTAAGAAC
GGAGCCCGACGCTGGATATACAGTTGACGGGACAGATTGGCGTGAATCTA
TCATCACGGGTGAAGATCCTAATAATCCAAATCAATCATTTCCAACTCAA
ACCTACGGCTTTGATGTAAATGCCGATGGTACAGTAAGTTCACATGGATT
TGCAGTAACTGCAGATTATTCTTTAGATGGCGGTTATACCATTGGTGGAA
ATGTTTCCTACAATAAGTTAATCGATCAGGATGAACTAATTAGTCAAGGA
TTTAGAGCAAGTTATAATACTCCTGAATGGAGATATAACGTAAAATTCCA
GAATAGAAAGCTAACCGATAAAATTGGATTCAATCTAGTTTATAGATGGC
AAGATGCATATATCTGGGAATCTTCTATCGGAGAGGGTGTTGTTCCTGCT
TTTGGGACCTTAGATGCACAAGTAAGCTACAAGCTTAATGATTACAATAC
GATTATAAAACTTGGGGGGAGTAATATCTTAAATGAGCGATATACTACTT
CACTAGCCAATCCACTATTAGGAGCCATTTATTATGTCTCTTTCACTTTC
GATCAATTCCTGAACTAAACCACCGCTGAGGCAGCAGCTTCTCTTCAGGC
AGTTAACTTTGATGATTTCCAACCAGAGAAAATTAATACGTTTGAACTTG
GTTACAAAAGCTTAATAGGAAACAGATTGTTTCTTGATGCATACTATTAC
TATAGTGCATATACTGATTTCATCGCCGAAATATCTTTCACACAAGGAAT
TCCAAATGGCTTAAGAACGGAGCCCGACGCTGGATATACAGTTGACGGGA
CAGATTGGCGTGAATCTATCATCACGGGTGAAGATCCTAATAATCCAAAT
CAATCATTTCCAACTCAAACCTACGGCTTTGATGTAAATGCCGATGGTAC
AGTAAGTTCACATGGATTTGCAGTAACTGCAGATTATTCTTTAGATGGCG
GTTATACCATTGGTGGAAATGTTTCCTACAATAAGTTAATCGATCAGGAT
GAACTAATTAGTCAAGGATTTAGAGCAAGTTATAATACTCCTGAATGGAG
ATATAACGTAAAATTCCAGAATAGAAAGCTAACCGATAAAATTGGATTCA
ATCTAGTTTATAGATGGCAAGATGCATATATCTGGGAATCTTCTATCGGA
GAGGGTGTTGTTCCTGCTTTTGGGACCTTAGATGCACAAGTAAGCTACAA
GCTTAATGATTACAATACGATTATAAAACTTGGGGGGAGTAATATCTTAA
ATGAGCGATATACTACTTCACTAGCCAATCCACTATTAGGAGCCATTTAT
TATGTCTCTTTCACTTTCGATCAATTCCTGAACTAA
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