mRNA_M-pyrifera_M_contig86529.20138.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86529.20138.1
Unique NamemRNA_M-pyrifera_M_contig86529.20138.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A813ANT5_9DINO (GlnS protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ANT5_9DINO)

HSP 1 Score: 279 bits (714), Expect = 6.750e-90
Identity = 146/282 (51.77%), Postives = 189/282 (67.02%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDA-PRAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            LDMWRP+V+EFS+L ++  +LSKR+I KLV++G   GWDDPRLLT+NG+RRRGFT  A+N FC  VGVTR+ N I +  LE   R DLD  +PR F V  PL VT+ N+PA        P FP++P  G   +  L S ++IE++DFRL+D KGY+GLAPGKTVGLRYGGN+KC  V RG  G  V+E+  EY+ ERS KPKGN+HW    A  +AE RLY+ LF+   P +  G+WED +NP S  V ++A V+    A    +  FQ ER G+F VD D+
Sbjct:   25 LDMWRPHVFEFSRLNISRNVLSKRKIIKLVSTGVVSGWDDPRLLTINGLRRRGFTPGAINEFCDCVGVTRNENLISINLLEHFARKDLDSHAPRAFAVLHPLKVTLVNVPAGFEETKEVPNFPRDPAAGS-HSKVLTSTVFIERADFRLQDAKGYYGLAPGKTVGLRYGGNIKCVEVKRGPKGD-VLELLCEYDAERSVKPKGNLHWASGKALQKAEVRLYDHLFTHETPDDAPGSWEDYINPESLTVVRDALVD-SHLASAEHFQSFQFERTGYFMVDPDT 303          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A5A8DLB1_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DLB1_CAFRO)

HSP 1 Score: 288 bits (737), Expect = 3.710e-88
Identity = 156/285 (54.74%), Postives = 191/285 (67.02%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWL---PFDAP-RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            L MWRP VWEFS+L +   +LSKR+I KLV  GT RGWDDPRLLT+NG+RRRGF+ E+LNAFC +VGVTRSANTI    L+   R   D  +PR F V DP+ V ITN+  + SF + A   PK+  +G  R L L   ++IE SDFR  D+ GYFGLAPGKTVGLR+ G L CTGV R  A G +  I A Y+HER S+PKGN+HW+   P   P RAE RLY+ LF+   PGE TGN+ DD+NP SE V  +A +E         ++ FQ ERLG+FT DKDS
Sbjct:  507 LGMWRPRVWEFSRLNIACNVLSKRKILKLVMGGTLRGWDDPRLLTINGIRRRGFSPESLNAFCDDVGVTRSANTIRPELLDHHARSFHDVHAPRAFAVIDPIRVEITNMADTDSFEVEAACHPKDASRGS-RKLVLSRTLFIETSDFRETDDSGYFGLAPGKTVGLRFAGLLTCTGVTRN-ASGEIACIQATYKHERDSRPKGNVHWVSAAPGAEPARAEIRLYSRLFTADFPGELTGNFLDDLNPKSEEVMSDAVIEASLVG-VREFSTFQFERLGYFTADKDS 788          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A835Z3U2_9STRA (Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3U2_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.740e-73
Identity = 141/288 (48.96%), Postives = 184/288 (63.89%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGN--LKCTGVVRGGAGGR--VVEITAEYEH--ERSSKPKGNIHWLPFD-APRAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            L+++RP V+EF++L +T+T+LSKRR+ KLV  G  RGWDDPR+ T+  +RRRG+TAEALNAFCT++GV+R+   I + RL    R  ++  +PR     +P+LVTITNLP      L APL P  PEKG  R + LGS I+I+ +DFR +D K YFGLAPGK VGL+Y G   L+C  VV+ G  G   V E+        E + +PKG + W+PFD A +AE RLYN LF+VP P     NWE  +N  SEVV   A V+          + FQ ERLGFF VD+DS
Sbjct:  245 LNIYRPKVYEFARLNITYTVLSKRRLLKLVKQGLVRGWDDPRMPTIKSLRRRGYTAEALNAFCTDIGVSRNETIIEVERLTYWARTLMNDTAPRAMACLEPILVTITNLPEVLK--LSAPLLPMAPEKGS-REILLGSSIYIDSTDFREQDSKDYFGLAPGKLVGLKYAGLRLLRCDKVVKTGEDGTGTVKELICSLVDIAEDAKRPKGTLSWVPFDSAVKAEIRLYNHLFTVPEPD---ANWEQQLNLESEVVMPNAVVDSSVLG-CAAGSPFQFERLGFFVVDRDS 525          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A0G4IYM9_PLABS (Glutamine--tRNA ligase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYM9_PLABS)

HSP 1 Score: 244 bits (622), Expect = 9.160e-72
Identity = 126/282 (44.68%), Postives = 184/282 (65.25%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAP-RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            LD++RP VWE+S+L +T+ +LSKR+++ LV      GWDDPRLLT+NG+RRRG++   +N FCT +GVTR+ NTI ++ LE   R +LD    R  +V DPL VT+TN       A+  PL PK PE G  R++ L   ++IE+SDFRL+D  GY+GLAPGK V L++  ++ CT V++  + GRVVE+    + + ++K KG +HW+   +P  A+ RLY+ LF  PNP ++  +W  D+NP S +VC+ A ++ G  A     A +Q ER+G+F  D DS
Sbjct:  462 LDLYRPAVWEYSRLNITYNVLSKRKLKALVMDRHVNGWDDPRLLTINGLRRRGYSPTIINEFCTRIGVTRADNTINMSVLEAIARQELDDTCHRAMVVVDPLKVTLTNFDEPEE-AITGPLHPKRPEFGT-RSVLLSKVVYIERSDFRLQDAPGYYGLAPGKQVHLKFAYHMTCTRVIQD-SNGRVVELECTLDKDSTAKVKGILHWVSGVSPVEADVRLYSTLFKSPNPSDKE-DWLGDLNPLSLIVCRGALLDAGFAASVKAGARYQFERVGYFIADTDS 739          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A5J4YVQ6_PORPP (Glutamine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVQ6_PORPP)

HSP 1 Score: 239 bits (609), Expect = 1.170e-69
Identity = 135/283 (47.70%), Postives = 179/283 (63.25%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAPRAEARLYNPLFSVPNPGERTGN--WEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            LDM+RP VWEF++L L  T++SKR++  LV SG  RGWDDPR+ T+ G+RRRG+T  A+N FC++ G +R+AN I L +LE  LR + D R PR   VT PL + I+N   SAS  L  P+ PK PE GE R + L  +++IE+SDFR  DEKGY+GLAPGKT  LRY   +  T V+R   G  VV + A  ++ +S KPKG +HW+   +   E RLY+ LF   +PG   G   WED +N  SEVV  EA V+        +   FQ ER+G+FT D+DS
Sbjct:  500 LDMYRPFVWEFARLTLEGTVVSKRKLLALVNSGRVRGWDDPRMPTLLGLRRRGYTPSAINEFCSQTGYSRNANVIGLHKLEHVLRSEFDERCPRAMCVTRPLEIEISNFDESASL-LKVPIHPKMPEMGE-RDVQLTRQVFIERSDFRDTDEKGYYGLAPGKTAMLRYAYPITVTNVIRSDEG-EVVRLVALCDYAKSVKPKGVLHWVSCTSKPCEVRLYDRLFKSADPGALGGEDIWED-LNDSSEVVLDEALVDEFA-GNCNVGDSFQFERVGYFTCDQDS 777          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A6A5C8D1_NAEFO (Glutamine--tRNA ligase n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C8D1_NAEFO)

HSP 1 Score: 237 bits (604), Expect = 4.020e-69
Identity = 131/289 (45.33%), Postives = 183/289 (63.32%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGG-NLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAP-----RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEP--GREAEFTLYAHFQAERLGFFTVDKDS 843
            L+++RP+V+EFS+L +T  +LSKR++  LV + T R WDDPR+LT+ G+RRRG+T EA+ +FC ++GVTR  N IP+ RLEQ+LR+DLD R+ R+F V +PL V +TN  A     + A   PK  ++G  R L     ++IE+SDFR  D + Y+GLAP KTVGLR+   N+ C  VV+  +G  +VE+    + E+  KPK  IHWL   AP      AE RLY  LF+V +  E    W D +NP SE+V Q A V+P         +Y  +Q ER+GFF VD+D+
Sbjct:  456 LNLYRPHVYEFSRLNITTALLSKRKVLALVKNKTIRSWDDPRVLTLAGLRRRGYTPEAIKSFCDDIGVTRVENLIPIERLEQSLRMDLDERANRVFAVLEPLKVVLTNYDADKVEYVEAKNHPKYADRGS-RQLPFSRILYIEKSDFREVDSEDYYGLAPNKTVGLRFAPCNIHCDKVVKDESG-NIVELHCTADFEKKVKPKTFIHWLAQPAPGVDPITAEVRLYEKLFTVDDLDEVGDKWMDYINPKSEIVIQNAFVDPVFKNPKNRQIYEKYQFERVGFFVVDQDT 742          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A0A078GD20_BRANA (BnaCnng04720D protein n=3 Tax=Brassica TaxID=3705 RepID=A0A078GD20_BRANA)

HSP 1 Score: 226 bits (575), Expect = 3.100e-68
Identity = 123/289 (42.56%), Postives = 179/289 (61.94%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANT-IPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFP--KEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAP-----RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            LD++ P VWE+S+L + +T++SKR++  +VT+    GWDDPRLLT+ G+RRRG T  A+N F   +G+TRS  T I ++RLE  +R +L+  +PR  +V +PL V ITNL +     L A  +P  +  +      +     ++I+QSDFR++D KGY+GLAPGK+V LRYG  +KCT VV       + EI AEY+HE+ +KPKG +HW+   +P     + E RL+  LF+  NP +    W  D+NP+S+VV  +A        +  +   FQ ERLG+F VDKDS
Sbjct:   89 LDLYMPYVWEYSRLNIINTVMSKRKLNYIVTNKHVDGWDDPRLLTLAGLRRRGVTPTAINGFVRGMGITRSDGTMIHMSRLEHHIREELNKTAPRAMVVLNPLKVVITNLESDKVVELDAKRWPDAQNDDLSAFYKVPFSRVVYIDQSDFRMKDSKGYYGLAPGKSVLLRYGFPIKCTNVVFADDNETIREIHAEYDHEKKTKPKGVLHWVAESSPGKEPIKIEVRLFEKLFNSENPAKLNDKWLTDINPNSKVVVSDA-YGGSILKDAVVGDRFQFERLGYFAVDKDS 376          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: A4RQT2_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RQT2_OSTLU)

HSP 1 Score: 229 bits (585), Expect = 3.510e-68
Identity = 132/288 (45.83%), Postives = 175/288 (60.76%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHE-RSSKP-KGNIHWLPFDAPRAEARLYNPLFSVPNPGERTG---NWEDDVNPHSEVVCQEARVEPG--REAEFTLYAHFQAERLGFFTVDKDS 843
            LD ++P  WEFS+  +T+ ++SKR++  LVT G   GWDDPRLLT+ G+RRRG+T  A+N FC  +GVTR  NT P++RLE  +R ++   + R F V DP+ V ITN P        AP+ P   E+G  R + L   I+IE+SDF+ ED  GYFGLAPGKTV L++G N+ CT   +    G V EI A  + E R++KP KG +HW   D  + E RLYN LF+V  P E      +W   +NP S VV ++A +EPG    A   L    Q +RLGFFT D DS
Sbjct:  233 LDTYKPVTWEFSRCNITYNVMSKRKLNTLVTKGYVNGWDDPRLLTLEGLRRRGYTPSAINKFCASLGVTRHDNTQPISRLENVVRDEMKDSASRYFAVLDPVKVNITNHPGG-ELMCEAPVHPSFAERGM-RRIDLKPTIFIERSDFKTEDVDGYFGLAPGKTVRLQFGYNITCTDF-KTHDDGSVSEINATIDMESRAAKPPKGILHWATPDFVKGECRLYNNLFTVEIPDEEDDGSVDWLTQINPESLVVHRDALLEPGLIEFASKPLETQVQLQRLGFFTFDNDS 517          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: UPI000D62BAAD (glutamine--tRNA ligase isoform X2 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62BAAD)

HSP 1 Score: 228 bits (580), Expect = 5.220e-68
Identity = 130/290 (44.83%), Postives = 182/290 (62.76%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRS-ANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFPKEP--EKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAP-----RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPG-REAEFTLYAHFQAERLGFFTVDKDS 843
            L +++P VWE+S+L +T+T++SKR++ +LVT     GWDDPRL+T++G+RRRG T+ A+N F   +G+TRS  + I L RLE  +R +L+  + R  +V +PL V ITNL A++   L A  +P  P  +      +   S ++IEQSDFR++D K Y+GLAPGKTV LRY   +KCT VV       VVE+ AEY+  + +KPKG +HW+   +P     + E RL+  LF   NPGE   NW DD+NP S+VV   A   P  R+A   +   FQ ERLG+F  DKDS
Sbjct:  177 LSLYQPYVWEYSRLNITNTVMSKRKLNRLVTENYVDGWDDPRLMTLSGLRRRGVTSTAINTFVRGIGITRSDGSMIRLERLEYHVREELNKTASRAMVVLNPLKVVITNLEANSVIDLDAKKWPDAPGDDPSSYYKVPFSSVVYIEQSDFRIKDSKDYYGLAPGKTVLLRYAFPIKCTEVVLSEDKKTVVEVHAEYDPFKKTKPKGVLHWVAEPSPGIDPLKVEVRLFEKLFLSENPGE-LDNWLDDLNPESKVVMTCAYAVPTLRDA--AVDDKFQFERLGYFVADKDS 463          
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Match: UPI0005402814 (glutamine--tRNA ligase isoform X2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0005402814)

HSP 1 Score: 222 bits (565), Expect = 1.810e-67
Identity = 123/289 (42.56%), Postives = 180/289 (62.28%), Query Frame = 1
Query:    1 LDMWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRRGFTAEALNAFCTEVGVTRS-ANTIPLTRLEQALRIDLDPRSPRIFLVTDPLLVTITNLPASASFALPAPLFP--KEPEKGEPRTLTLGSKIWIEQSDFRLEDEKGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPKGNIHWLPFDAP-----RAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEARVEPGREAEFTLYAHFQAERLGFFTVDKDS 843
            L ++ P VWE+S+L +T+T++SKR++  LVT     GWDDPRL+T+ G+RRRG +A A+N F   +G+TRS ++ I L RLE  +R +L+  + R  +V  P+ V ITNL A     L A  +P  +  +      +   + ++IE+SDFR++D K Y+GLAPGK+V LRYG  ++CT V+ G     ++EI AEY+ E+ +KPKG +HW+   +P     + E RL+  LF   NP E   NW DD+NP+++VV  EA      ++   L   FQ ERLG+F VDKDS
Sbjct:   30 LGLYMPYVWEYSRLNMTNTVMSKRKLNCLVTEKYVDGWDDPRLMTLAGLRRRGVSATAINTFVRGIGITRSDSSLIRLDRLEYHIREELNKTAARAMVVLHPVKVVITNLEAGKVIELDAKKWPDAQTDDTSALYKVPFSNVVYIERSDFRIKDSKDYYGLAPGKSVLLRYGFPIRCTDVIVGDDNETIIEIRAEYDPEKKTKPKGVLHWVGEPSPGVNPLKVEVRLFERLFLSENPAE-LDNWLDDLNPNTKVVIPEAYAVSSLQSA-VLSDRFQFERLGYFAVDKDS 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86529.20138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813ANT5_9DINO6.750e-9051.77GlnS protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A5A8DLB1_CAFRO3.710e-8854.74Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A835Z3U2_9STRA1.740e-7348.96Glutaminyl-tRNA synthetase n=1 Tax=Tribonema minus... [more]
A0A0G4IYM9_PLABS9.160e-7244.68Glutamine--tRNA ligase n=1 Tax=Plasmodiophora bras... [more]
A0A5J4YVQ6_PORPP1.170e-6947.70Glutamine--tRNA ligase n=1 Tax=Porphyridium purpur... [more]
A0A6A5C8D1_NAEFO4.020e-6945.33Glutamine--tRNA ligase n=2 Tax=Naegleria TaxID=576... [more]
A0A078GD20_BRANA3.100e-6842.56BnaCnng04720D protein n=3 Tax=Brassica TaxID=3705 ... [more]
A4RQT2_OSTLU3.510e-6845.83Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
UPI000D62BAAD5.220e-6844.83glutamine--tRNA ligase isoform X2 n=1 Tax=Cynara c... [more]
UPI00054028141.810e-6742.56glutamine--tRNA ligase isoform X2 n=1 Tax=Beta vul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86529contigM-pyrifera_M_contig86529:3..845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.5
Seed ortholog evalue1.6e-56
Seed eggNOG ortholog5762.XP_002669489.1
KEGG rclassRC00055,RC00523
KEGG koko:K01885,ko:K01886
KEGG ReactionR03652,R05578
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.glutaminyl-tRNA aminoacylation
EggNOG OGsCOG0008@1,KOG1148@2759
EC6.1.1.17,6.1.1.18
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Exons1
Model size843
Cds size837
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816774.8015947-UTR-M-pyrifera_M_contig86529:2..81622816774.8015947-UTR-M-pyrifera_M_contig86529:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86529 3..8 +
1692278170.8731146-UTR-M-pyrifera_M_contig86529:2..81692278170.8731146-UTR-M-pyrifera_M_contig86529:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig86529 3..8 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816774.8128197-CDS-M-pyrifera_M_contig86529:8..8451622816774.8128197-CDS-M-pyrifera_M_contig86529:8..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86529 9..845 +
1692278170.885855-CDS-M-pyrifera_M_contig86529:8..8451692278170.885855-CDS-M-pyrifera_M_contig86529:8..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86529 9..845 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86529.20138.1prot_M-pyrifera_M_contig86529.20138.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86529 9..845 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86529.20138.1

>prot_M-pyrifera_M_contig86529.20138.1 ID=prot_M-pyrifera_M_contig86529.20138.1|Name=mRNA_M-pyrifera_M_contig86529.20138.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=279bp
MWRPNVWEFSKLQLTHTILSKRRIRKLVTSGTCRGWDDPRLLTVNGMRRR
GFTAEALNAFCTEVGVTRSANTIPLTRLEQALRIDLDPRSPRIFLVTDPL
LVTITNLPASASFALPAPLFPKEPEKGEPRTLTLGSKIWIEQSDFRLEDE
KGYFGLAPGKTVGLRYGGNLKCTGVVRGGAGGRVVEITAEYEHERSSKPK
GNIHWLPFDAPRAEARLYNPLFSVPNPGERTGNWEDDVNPHSEVVCQEAR
VEPGREAEFTLYAHFQAERLGFFTVDKDS
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mRNA from alignment at M-pyrifera_M_contig86529:3..845+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86529.20138.1 ID=mRNA_M-pyrifera_M_contig86529.20138.1|Name=mRNA_M-pyrifera_M_contig86529.20138.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig86529:3..845+ (Macrocystis pyrifera P11B4 male)
CTCGACATGTGGCGGCCAAACGTGTGGGAGTTCTCCAAGCTGCAGCTCAC GCACACCATCCTCTCCAAGCGCCGCATTCGAAAACTGGTCACCTCAGGCA CCTGCAGGGGCTGGGATGACCCTCGTCTCCTCACAGTCAATGGCATGCGA CGAAGAGGATTCACAGCAGAAGCGCTCAACGCCTTTTGCACTGAAGTCGG AGTCACTCGCTCGGCCAACACCATCCCTCTCACCCGACTCGAACAAGCAC TCCGCATTGACCTCGACCCTCGCTCGCCTCGCATCTTCCTCGTCACAGAC CCGCTCCTCGTGACCATCACCAACCTCCCTGCCTCCGCCTCCTTCGCTCT CCCAGCACCACTCTTCCCGAAAGAGCCCGAAAAAGGAGAACCCCGCACCC TCACACTGGGCTCCAAGATTTGGATCGAACAGTCGGATTTTCGCCTCGAG GACGAGAAAGGGTACTTTGGGCTCGCCCCGGGCAAGACTGTGGGACTGCG GTATGGAGGAAACCTCAAGTGCACTGGGGTTGTGCGTGGAGGAGCCGGAG GTAGGGTGGTGGAGATCACGGCAGAGTACGAGCACGAACGCAGCTCCAAG CCCAAAGGAAACATCCACTGGCTGCCCTTTGATGCCCCTCGCGCCGAGGC ACGCCTCTACAACCCGCTCTTCTCCGTCCCAAACCCAGGAGAACGCACCG GAAACTGGGAAGACGACGTCAACCCCCACTCCGAGGTCGTGTGCCAGGAA GCCAGGGTGGAGCCAGGCAGAGAGGCCGAATTCACCCTCTACGCCCACTT CCAGGCCGAGCGACTCGGCTTCTTCACCGTCGACAAGGACTCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86529:3..845+

>mRNA_M-pyrifera_M_contig86529.20138.1 ID=mRNA_M-pyrifera_M_contig86529.20138.1|Name=mRNA_M-pyrifera_M_contig86529.20138.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1674bp|location=Sequence derived from alignment at M-pyrifera_M_contig86529:3..845+ (Macrocystis pyrifera P11B4 male)
ATGTGGCGGCCAAACGTGTGGGAGTTCTCCAAGCTGCAGCTCACGCACAC
CATCCTCTCCAAGCGCCGCATTCGAAAACTGGTCACCTCAGGCACCTGCA
GGGGCTGGGATGACCCTCGTCTCCTCACAGTCAATGGCATGCGACGAAGA
GGATTCACAGCAGAAGCGCTCAACGCCTTTTGCACTGAAGTCGGAGTCAC
TCGCTCGGCCAACACCATCCCTCTCACCCGACTCGAACAAGCACTCCGCA
TTGACCTCGACCCTCGCTCGCCTCGCATCTTCCTCGTCACAGACCCGCTC
CTCGTGACCATCACCAACCTCCCTGCCTCCGCCTCCTTCGCTCTCCCAGC
ACCACTCTTCCCGAAAGAGCCCGAAAAAGGAGAACCCCGCACCCTCACAC
TGGGCTCCAAGATTTGGATCGAACAGTCGGATTTTCGCCTCGAGGACGAG
AAAGGGTACTTTGGGCTCGCCCCGGGCAAGACTGTGGGACTGCGGTATGG
AGGAAACCTCAAGTGCACTGGGGTTGTGCGTGGAGGAGCCGGAGGTAGGG
TGGTGGAGATCACGGCAGAGTACGAGCACGAACGCAGCTCCAAGCCCAAA
GGAAACATCCACTGGCTGCCCTTTGATGCCCCTCGCGCCGAGGCACGCCT
CTACAACCCGCTCTTCTCCGTCCCAAACCCAGGAGAACGCACCGGAAACT
GGGAAGACGACGTCAACCCCCACTCCGAGGTCGTGTGCCAGGAAGCCAGG
GTGGAGCCAGGCAGAGAGGCCGAATTCACCCTCTACGCCCACTTCCAGGC
CGAGCGACTCGGCTTCTTCACCGTCGACAAGGACTCCATGTGGCGGCCAA
ACGTGTGGGAGTTCTCCAAGCTGCAGCTCACGCACACCATCCTCTCCAAG
CGCCGCATTCGAAAACTGGTCACCTCAGGCACCTGCAGGGGCTGGGATGA
CCCTCGTCTCCTCACAGTCAATGGCATGCGACGAAGAGGATTCACAGCAG
AAGCGCTCAACGCCTTTTGCACTGAAGTCGGAGTCACTCGCTCGGCCAAC
ACCATCCCTCTCACCCGACTCGAACAAGCACTCCGCATTGACCTCGACCC
TCGCTCGCCTCGCATCTTCCTCGTCACAGACCCGCTCCTCGTGACCATCA
CCAACCTCCCTGCCTCCGCCTCCTTCGCTCTCCCAGCACCACTCTTCCCG
AAAGAGCCCGAAAAAGGAGAACCCCGCACCCTCACACTGGGCTCCAAGAT
TTGGATCGAACAGTCGGATTTTCGCCTCGAGGACGAGAAAGGGTACTTTG
GGCTCGCCCCGGGCAAGACTGTGGGACTGCGGTATGGAGGAAACCTCAAG
TGCACTGGGGTTGTGCGTGGAGGAGCCGGAGGTAGGGTGGTGGAGATCAC
GGCAGAGTACGAGCACGAACGCAGCTCCAAGCCCAAAGGAAACATCCACT
GGCTGCCCTTTGATGCCCCTCGCGCCGAGGCACGCCTCTACAACCCGCTC
TTCTCCGTCCCAAACCCAGGAGAACGCACCGGAAACTGGGAAGACGACGT
CAACCCCCACTCCGAGGTCGTGTGCCAGGAAGCCAGGGTGGAGCCAGGCA
GAGAGGCCGAATTCACCCTCTACGCCCACTTCCAGGCCGAGCGACTCGGC
TTCTTCACCGTCGACAAGGACTCC
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