mRNA_M-pyrifera_M_contig86422.20121.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A3C2B337_9ACTN (Serine hydrolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B337_9ACTN) HSP 1 Score: 265 bits (676), Expect = 1.290e-83 Identity = 133/208 (63.94%), Postives = 161/208 (77.40%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASG-GRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPILP 621 +KR+MQ EW ++GT YGLGF + IGGRRVLGHGGGYPGHITRTYFDP DRLAVS LTNAIDGPAL MA A +KL+DLA ++ DPAA+ G +DL F GRFAT+WGVYD+ +LGGRL+Q++P+ DPT +PT LDV+D TLRI T GYGS GE +T++R+ DGSVRSVRGGSG+ A P FR A+AAR +V LG P+ P Sbjct: 267 AKRQMQHGEWKIDGTE-AEYGLGFEIVTIGGRRVLGHGGGYPGHITRTYFDPTDRLAVSVLTNAIDGPALAMATAAIKLIDLARGSEPDPAATNDGAIDLQSFCGRFATVWGVYDIALLGGRLYQLSPSLVDPTVAPTRLDVIDGDTLRIADTAGYGSRGELMTFDRHPDGSVRSVRGGSGSLAHPFDEFRAAIAARTQVTLGAPVRP 473
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A7W1R5Y6_9ACTN (Serine hydrolase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1R5Y6_9ACTN) HSP 1 Score: 212 bits (540), Expect = 1.060e-65 Identity = 115/208 (55.29%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDD-RTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPILP 621 SKR MQRTEW V G+ G+ Y LGF V +I RR+LGHGGG+PGHIT T FDP DR+A S LTNAIDGPA A +L+DLA A A + S F GRFA LWGV DVV LGGRLH + PT DPTA P LDV D+ TLRI + GY + GE L Y R+DDG+VR VRG G + +P PF ALA +R +G P++P Sbjct: 57 SKRVMQRTEWQVAGSAGSEYALGFGVTKINDRRLLGHGGGFPGHITHTLFDPHDRIAASVLTNAIDGPAQMYVATVFRLIDLALGAAASETPAVAPDVASRFTGRFANLWGVSDVVDLGGRLHLLDPTVGDPTADPIRLDVADELTTLRITDSPGYAAPGEELVYTRDDDGAVREVRGAGGVTMYPHDPFVAALARTDRARVGDPVVP 264
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A7W0T7V6_9ACTN (Beta-lactamase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0T7V6_9ACTN) HSP 1 Score: 212 bits (540), Expect = 3.900e-63 Identity = 115/208 (55.29%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDD-RTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPILP 621 SKR MQRTEW V G+ G+ Y LGF V +I RR+LGHGGG+PGHIT T FDP DR+A S LTNAIDGPA A +L+DLA A A + S F GRFA LWGV DVV LGGRLH + PT DPTA P LDV D+ TLRI + GY + GE L Y R+DDG+VR VRG G + +P PF ALA +R +G P++P Sbjct: 276 SKRVMQRTEWQVAGSAGSEYALGFGVTKINDRRLLGHGGGFPGHITHTLFDPHDRIAASVLTNAIDGPAQMYVATVFRLIDLALGAAASETPAVAPDVASRFTGRFANLWGVSDVVDLGGRLHLLDPTVGDPTADPIRLDVADELTTLRITDSPGYAAPGEELVYTRDDDGAVREVRGAGGVTMYPHDPFVAALARTDRARVGDPVVP 483
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A7K3M5M4_9ACTN (Serine hydrolase n=2 Tax=Phytoactinopolyspora mesophila TaxID=2650750 RepID=A0A7K3M5M4_9ACTN) HSP 1 Score: 205 bits (522), Expect = 1.250e-60 Identity = 116/205 (56.59%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPI 615 SKR MQR EW VEGT G YGLG + EIGGR V GHGGGYPGHITRT+FDP DRLAVS LTNAIDGPA E+A ++LV+LA D A L F GRFA LW DVV+LGG+L+ +APT ADPT +P L V+DD TLR+ GY S GETL+YE + D +V S+RG +GTS +P+ R A A V G P+ Sbjct: 267 SKRLMQRAEWKVEGTDGE-YGLGLSRAEIGGRLVFGHGGGYPGHITRTFFDPEDRLAVSVLTNAIDGPAEELAVTLLRLVNLAESGAHDTDAGSDHAGLHRFTGRFANLWRAADVVLLGGQLYLLAPTAADPTHAPAKLSVIDDHTLRMTGGVGYASYGETLSYEFSGD-TVMSIRGATGTS-YPIERVRGAAATLGHVSPGKPL 468
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: UPI0014086C68 (serine hydrolase n=1 Tax=Phytoactinopolyspora limicola TaxID=2715536 RepID=UPI0014086C68) HSP 1 Score: 203 bits (516), Expect = 1.090e-59 Identity = 119/211 (56.40%), Postives = 139/211 (65.88%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGR------VDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPI 615 SKR M+R EW VEG G + YG G A E GGRRV GHGGGYPGHITRTYFDP DRLAVS LTNAIDGPA +A A ++LV+LA + P A GG VDL F GR+A LW V DV +LGGRL+ + PT DPT T L VVDDRTL+I GYGS GE LT+E D +V SVRGGS T+++P+ A A R V + P+ Sbjct: 267 SKRLMRRAEWTVEG-GQSEYGFGLARFEFGGRRVYGHGGGYPGHITRTYFDPADRLAVSVLTNAIDGPADTLANALIRLVNLA--VEGAPLADGGSPPPANGVDLRRFTGRYANLWRVSDVALLGGRLYLMVPTSDDPTQGLTPLTVVDDRTLKISGGVGYGSYGEALTFEF-DGAAVVSVRGGSATTSYPIDELTAAAAKRATVSVEAPL 473
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A6L9S1V4_9ACTN (Beta-lactamase family protein n=2 Tax=Phytoactinopolyspora halotolerans TaxID=1981512 RepID=A0A6L9S1V4_9ACTN) HSP 1 Score: 202 bits (515), Expect = 1.440e-59 Identity = 117/212 (55.19%), Postives = 142/212 (66.98%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGR-------VDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPI 615 SKR MQR EW V+G+ G YGLG EIGGRRV GHGGGYPGHIT+TYFDP +LAVS LTNAIDGPA +A+ +++V+LA ++ SGG VDL F GRFAT+WGV DVV LG RL+ P DPT T LDVVDD TLR+V G+GS GET+ YE + V SVRGGS T+A+P+ A+A +ERV +G P+ Sbjct: 267 SKRLMQRAEWQVDGSDGE-YGLGLDRAEIGGRRVFGHGGGYPGHITKTYFDPEAKLAVSVLTNAIDGPAEPLASGLIRMVNLAVES------SGGNGDERRSDVDLDRFTGRFATMWGVQDVVRLGRRLYLFRPVADDPTQPTTKLDVVDDSTLRVVGGIGFGSYGETVRYEFSG-AEVVSVRGGSATTAYPIERITAAVATQERVSVGDPL 470
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A4R4RUG3_9ACTN (Class A beta-lactamase-related serine hydrolase n=3 Tax=Jiangella TaxID=281472 RepID=A0A4R4RUG3_9ACTN) HSP 1 Score: 200 bits (509), Expect = 1.330e-58 Identity = 116/206 (56.31%), Postives = 134/206 (65.05%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPIL 618 SKR MQR EW VEG GG YGLGF IG R V GHGGGYPGH+TRT FDPV RLAVS LTNAIDGPA+ +A ++LV+LA A P VDLS F GRFAT+W V+DVV L GRL+ + PTE DPT+ P L VVDD TLRI TGY GE + YE DG V SV+ + T A P+ A+ +RV GTP+L Sbjct: 268 SKRLMQRAEWKVEGRGGAEYGLGFGRSMIGDRLVFGHGGGYPGHLTRTSFDPVGRLAVSVLTNAIDGPAVMLAEGLIRLVNLAESAS--PLLEPSPVDLSRFTGRFATMWRVFDVVDLAGRLYLLDPTERDPTSEPVTLAVVDDHTLRISGGTGYAPVGEPIRYEFAVDG-VASVQAFAMT-AHPIDRVARAVRTHDRVSPGTPLL 469
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: UPI0004B00250 (serine hydrolase n=1 Tax=Jiangella gansuensis TaxID=281473 RepID=UPI0004B00250) HSP 1 Score: 199 bits (506), Expect = 2.840e-58 Identity = 115/206 (55.83%), Postives = 140/206 (67.96%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPIL 618 SKR MQR EW +EG + YGLGF +G R V GHGGGYPGHITRT+FDPVD++AVS LTNAIDGPAL +A A +LV+LA +A+ G VDLS F GRFA LW V+DVV L G+L+ + PT+ DPTA P L+VVD+RTLR+ +GYG GET+ Y R DD V SV + T A P A EA R+RV GTP++ Sbjct: 267 SKRLMQRAEWKIEGAN-SEYGLGFGRAVVGERLVHGHGGGYPGHITRTWFDPVDQIAVSVLTNAIDGPALMLAEALFRLVNLAQRAERQ---DGTGVDLSRFTGRFANLWRVFDVVDLAGQLYLLDPTDQDPTAQPVTLEVVDERTLRLRDGSGYGPVGETMQY-RYDDTGVSSVAAFAMT-AHPAARVTEAAKRRDRVSPGTPLV 466
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: UPI000D686613 (serine hydrolase n=1 Tax=Nocardioides speluncae TaxID=2670337 RepID=UPI000D686613) HSP 1 Score: 199 bits (506), Expect = 3.710e-58 Identity = 111/208 (53.37%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLA-NKADADPAASGGRVDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPILP 621 SKRRMQR++W + YGLGF V +G RRV+GHGGGYPGHIT T DPVDRLAVS LTNAIDG A +L+ LA + AD++P G VDL F GRFA+LW V DV G RL+ + PT DPT PT L VVDDRTLR++ G+GS GE + Y DDG + SVRG SG + +P F A AAR+R+ +G P++P Sbjct: 267 SKRRMQRSQWTTGRD--SEYGLGFDVSTVGDRRVVGHGGGYPGHITNTKLDPVDRLAVSVLTNAIDGAAGACVTTFFRLLGLALDPADSEPVPEG--VDLDRFRGRFASLWSVTDVARFGDRLYLLDPTADDPTHEPTALTVVDDRTLRMMGENGFGSRGEPMRYTFGDDG-IESVRGSSGGTGYPYDRFAAAAAARDRITIGRPLIP 469
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Match: A0A6N9YLJ2_9ACTN (Beta-lactamase family protein n=2 Tax=Phytoactinopolyspora alkaliphila TaxID=1783498 RepID=A0A6N9YLJ2_9ACTN) HSP 1 Score: 199 bits (505), Expect = 4.000e-58 Identity = 118/207 (57.00%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 1 SKRRMQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDRLAVSALTNAIDGPALEMAAAGVKLVDLANKADADPAASGGR--VDLSGFEGRFATLWGVYDVVVLGGRLHQIAPTEADPTASPTLLDVVDDRTLRIVKTTGYGSAGETLTYERNDDGSVRSVRGGSGTSAFPLAPFREALAARERVELGTPI 615 SKR MQR EW V+G G YGLG A EIG R VLGHGGGYPGHIT+T FDP DRLAVS LTNAIDGPA +AA V+LV+LA + + A GR L F GRFATLWGV DVV LG +L + PT DPT L V D TLRI GYGS GETL Y D G V SVRGGS T+++P+ A ERV +GTP+ Sbjct: 262 SKRLMQRAEWTVKGADGE-YGLGLARVEIGDRLVLGHGGGYPGHITKTLFDPHDRLAVSVLTNAIDGPAETLAAGLVRLVNLAVEQGGEGRAGDGRESAGLDRFTGRFATLWGVVDVVRLGHKLFLLRPTSDDPTQGAAPLTVEGDHTLRIAGGIGYGSFGETLEYVFGDHG-VESVRGGSATTSYPIERITAAAETLERVSVGTPL 466 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86422.20121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86422.20121.1 >prot_M-pyrifera_M_contig86422.20121.1 ID=prot_M-pyrifera_M_contig86422.20121.1|Name=mRNA_M-pyrifera_M_contig86422.20121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp MQRTEWVVEGTGGTAYGLGFAVDEIGGRRVLGHGGGYPGHITRTYFDPVDback to top mRNA from alignment at M-pyrifera_M_contig86422:211..843- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86422.20121.1 ID=mRNA_M-pyrifera_M_contig86422.20121.1|Name=mRNA_M-pyrifera_M_contig86422.20121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig86422:211..843- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86422:211..843- >mRNA_M-pyrifera_M_contig86422.20121.1 ID=mRNA_M-pyrifera_M_contig86422.20121.1|Name=mRNA_M-pyrifera_M_contig86422.20121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig86422:211..843- (Macrocystis pyrifera P11B4 male)back to top |