mRNA_M-pyrifera_M_contig8642.20120.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: D8LNE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE3_ECTSI) HSP 1 Score: 641 bits (1654), Expect = 9.040e-209 Identity = 432/839 (51.49%), Postives = 526/839 (62.69%), Query Frame = 1
Query: 16 GQITAAVGRVCLRFKNKVKARN--GQVFVKCVFAGEGSSLFVARPAPRGSGQRTPGADSTAVLP---PLIAQSEPVVITAL--SQALEEEATVVSAADAAATVMDIGFSLDSTKFVLTEQNLSLLENTAIKMELCMR---SGSGGSEDIADAAVVVGTVGVKIASVLRGENQWTADLALGAYTPTPSQADPTLAPVDEALQEAGTGELACTAESVVEKEGIDAEDTSPGPLEYGGSTSTMRVTLATNDDTADYTLGAGSLWTDGAEVDGLPEGWKVRPPPETERSSWNNAITQILAGRPRHEYTMWWGAD-AKSPEAATTEEQDVPSFPSMRLSGGVLSYTPDDQSADTSSGHRD-AAGXXXXXXXXXXXXXXXXXXXAEGRGSTDESGTPA-PVEPPSGTWSVRFPASQVTSHFLHRTSMRALRRALAS-SG----------NPRGASATTTTAIRVFLDRRELKPPTPLETGPPGKGGKGAKKXXXPAGKGAPXXXXXXXX----EAPWRCRAMLDISPLVKVVGGSDGEGRGGVSPEGGKCGASPLRVELKAPLALLQLEKD--------GDLAGAEVDPAAPTTTAAAAESVAVRAQAANEHAPPPRPLLPAAFSR-GQMNEANTALLVTFALSRPLAKAPVRQETAVSVSDLFVPKDVGPRTPPRDVEAELKEELDAFVQAVLMEYAKLFLEPGGCAAGGELELTAQDREKRLFYALNSGGLYHSFLERLKPRVQRVVRKRFGAVPADAAEEDSFISELYAHLVEEAAAVLNHRIKNIEAEAVPSYVKCNADESLEERVEHFCMLADDAEARGARKEAAARHEDRIEAATAAAA 2421
GQITAAVGR+CLRFKN A + GQVF +C F G G + FV P P Q P D P P QSEPV IT SQ ++E V + + V D+GFSLD+ KF L E LS ++ T IK+ELC+R +G GGS V+GT V++A++L GEN+WT +LALG YT +P P + E + E E T ++ + +D S G LE GGSTST+RVTL NDDTADYT+GAGSLW DGAEV G+PEGWKV PPPETER +WN+AI Q L+G+PRHE+++WWGAD +P EE+ + FP+MRL GGVLSY PD++S + S D AA XXXXXXXX DE+ TPA P +PP+G WSVRFP+ Q S FLHRTS+R LR+AL + SG +P +TT+ + V L+RREL+ + G GGKG XXX XXXXXXX E+PWRCRA++D++PL + S SPLR EL+A LAL + D AG +V+ A A AE V + P +P+L A SR QM A+T L +TFALSRPL +A +Q+T VSV D+FVP DVGPR P RDV+ ELK+ELD FVQA L EYAKLFLEPG A +L+AQDREK LFYALNSGGLYHSFL RLKPRVQR+VRKRFGAVP D+AE D+FIS+LY HLVEEAA VLNHRIKN+E +A PSY+ +AD+SLE +VEH MLADDAEARGAR+EA ARHEDRIEAAT AAA
Sbjct: 8 GQITAAVGRICLRFKNGPDAPSPQGQVFARCTFVGRGETFFVPTP-PAADSQAPPLVDKAIGSPQTLPSSVQSEPVDITEAVNSQIDQDEDNVGNDNVSNVVVADLGFSLDTAKFDLVEDTLSKIDATVIKIELCLRHGGTGGGGSTGAEVETAVIGTASVRVAAILSGENEWTNELALGTYTTSPP---PDAENLKEVVAEESK-EPGLTDDAAI-------QDASSGLLELGGSTSTIRVTLLANDDTADYTVGAGSLWMDGAEVTGVPEGWKVVPPPETERPAWNDAIAQALSGQPRHEFSIWWGADPVGAPGDNLEEEETIKEFPAMRLDGGVLSYVPDEESVNVDSVASDSAADEGSQRQASSPAXXXXXXXXXXXXXXXDENPTPAVPRDPPAGAWSVRFPSFQTKSSFLHRTSIRELRQALTTPSGGGHRQERGPEDPEKNLPSTTSKLHVILERRELRSEPSADEGK--AGGKGXXXXXXXXXXXXXXXXXXXXPXPPVESPWRCRAVIDLAPLARPAAVMSHPAVAAGSLVDSDARDSPLRAELRATLALAPSPAEEVPIEATADDAAGKKVEEAMAPAVAPTAEEVKLDESPGE---PSDQPVLSEAESRIEQMKAADTTLFLTFALSRPLMRATAKQDTTVSVGDVFVPSDVGPRKPARDVDVELKQELDEFVQASLEEYAKLFLEPG--ADEDTQDLSAQDREKHLFYALNSGGLYHSFLGRLKPRVQRIVRKRFGAVPEDSAEADAFISDLYVHLVEEAAVVLNHRIKNVETKATPSYITADADKSLELKVEHLGMLADDAEARGAREEATARHEDRIEAATEAAA 827
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: A0A6H5KT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT48_9PHAE) HSP 1 Score: 561 bits (1447), Expect = 4.650e-179 Identity = 397/843 (47.09%), Postives = 487/843 (57.77%), Query Frame = 1
Query: 16 GQITAAVGRVCLRFKNKVKARN--GQVFVKCVFAGEGSSLFVARPAPRGSGQRTPGADSTAVLPPLI---AQSEPVVIT-ALSQALEEEATVVSAADAAAT---VMDIGFSLDSTKFVLTEQNLSLLENTAIKMELCMRSGS---GGSEDIADAAVVVGTVGVKIASVLRGENQWTADLALGAYTPTPSQADPTLAPVDEALQEAGTGELACTAESVVEKEGID---AEDTSPGPLEYGGSTSTMRVTLATNDDTADYTLGAGSLWTDGAEVDGLPEGWKVRPPPETERSSWNNAITQILAGRPRHEYTMWWGAD-AKSPEAATTEEQDVPSFPSMRLSGGVLS-------YTPDDQSADTSSGHRDAAGXXXXXXXXXXXXXXXXXXXAEGRGSTDESGTPA-PVEPPSGTWSVRFPASQVTSHFLHRTSMRALRRALAS---SGNPRGASATTTTAIRVFLDRRELKPPTPLETGPPGKGGKGAKKXXXPAGKGAPXXXXXXXX----EAPWRCRAMLDISPLVKVVGGSDGEGRGGVSPEGGKCGASPLRVELKAPLAL---------LQLEKDGDLAGAEVDPAAPTTTAAAAESVAVRAQAANEHAPPPRPLLPAAFSRGQMNEANTALLVTFALSRPLAKAPVRQETAVSVSDLFVPKDVGPRTPPRDVEAELKEELDAFVQAVLMEYAKLFLEPGGCAAGGELE-LTAQDREKRLFYALNSGGLYHSFLERLKPRVQRVVRKRFGAVPADAAEEDSFISELYAHLVEEAAAVLNHRIKNIEAEAVPSYVKCNADESLEERVEHFCMLADDAEARGARKEAAARHEDRIEAATAAAA 2421
GQI+AAVGRVCLRFK+ A + GQVF +C F G G FV P GQ P D P + SEPV IT A++ +E++ +V + T V D+GFSLD+ KF L E LS L+ T IK+ELC+R G GGS + V+GT V++ ++LRGEN+WT +LALG YT +P P E L+E AE E ID D S G LE+GGSTST+RVTL NDDTADYT+GAGSLW DGAEV G+PE WK+ PP +TE +WN+AI + L+G+PRHE+++WWGAD +P +E+ V FP+MRL GGVL Y PD++S + S D+A XXXXXXXX E+ TPA P +PP+GTWSV FP+ Q S FLHRTS+R LR AL + G+P T + + V L+RRE++P + G GGKG XXX XXXXXXXX E+PWRCRA++D++PL + S G SPLR EL+A LAL ++ D D AG +V+ A A AAE V ++T SV D+FVP DVGPR PPRDV+ ELK+ELD FVQ G +++ L+AQDREK LFYALNSGGLYHSFL RLKPRVQRVVRKRFGAVP DAAE D+FIS+LY HLVEEAA VLNHRIKN E +A PSY+ +AD+SLE +VEH MLADDAEARGAR+EAAARHEDRIEAAT AAA
Sbjct: 8 GQISAAVGRVCLRFKSGPNAPSPQGQVFARCTFVGRGEPFFVPTPL-AADGQAPPVVDKATGSPQTLLSSVHSEPVDITEAVNSQIEQDGDIVGNDNVPTTKVVVADLGFSLDTAKFELVEDALSKLDATVIKIELCLRHGGTCGGGSTGAEEETAVIGTASVRVTAILRGENEWTNELALGTYTASPP-------PDAEKLKEV-------VAEESKEPGLIDDAAIHDASSGLLEFGGSTSTIRVTLLANDDTADYTVGAGSLWIDGAEVTGVPESWKMLPPRDTEHPTWNDAIAKALSGQPRHEFSIWWGADPVGAPGDNLEDEETVKEFPAMRLDGGVLRWADTFSVYVPDEESVNVDSVASDSAADEGSQGQASSPXXXXXXXXXXXX-XXXENPTPAVPRDPPTGTWSVLFPSFQTKSSFLHRTSIRELREALTTPCGGGDPEKNLPATKSKLHVILERREIRPEPSADEGK--AGGKGXXXXXXXXXXXXXXXXXXXXXXXXAESPWRCRAVIDLAPLARPAAVMSHPAVASGSLVDSDAGDSPLRAELRATLALAPPPAQDAPIEATAD-DAAGKKVEEATAPAVAPAAEEV--------------------------------------------------KDTTASVGDVFVPSDVGPRKPPRDVDVELKQELDEFVQVSXXXXXXXXXXXGADMRREDMQDLSAQDREKHLFYALNSGGLYHSFLGRLKPRVQRVVRKRFGAVPEDAAEADAFISDLYVHLVEEAAVVLNHRIKNAETKATPSYITADADKSLELKVEHLGMLADDAEARGAREEAAARHEDRIEAATEAAA 781
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: A0A835YIA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA9_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.180e-23 Identity = 83/220 (37.73%), Postives = 120/220 (54.55%), Query Frame = 1
Query: 1774 MNEANTALLVTFALSRPLAKAPVRQETAVSVSDLFV--PKDVGPRTPPRDVEAELKEELDAFVQAVLMEYAKLF----LEPGGCAAGGELELTAQDREKRLFYALNSGGLYHSFLERLKPRVQRVVRKRFGAVPADAAEE----DSFISELYAHLVEEAAAVLNHRIKNIEAEAVPSYVKCNADESLEERVEHFCMLADDAEARGARKEAAARHEDRIEA 2403
++E+ TAL + LSR L P + L V P+++ PP DVE + ++E+DAFV+AVL+EY KLF ++LFYAL++GG+YH F E LKPR+QRVVRKR A + D LY+ LV+ A AVL R+++IEA +P Y+ +A ++ +R +LA+DAEA + A RH+DRI+A
Sbjct: 412 LSESGTALRLGARLSRALVTLPPVMAVTPGETVLRVAPPRELRRPKPPVDVEQDWQDEIDAFVRAVLVEYTKLFGAAXXXXXXXXXXXXXXXXXXXXXRQLFYALSAGGMYHRFKEALKPRIQRVVRKRLSTAAAPLSTPTPPPDQLACALYSDLVQRANAVLLLRLRDIEAGLLPQYLSTDATAAVAQRARALGLLAEDAEASEQWERAVLRHQDRIDA 631
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: A0A7S2C0P5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0P5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.010e-17 Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 2038 QDREKRLFYALNSGGLYHSFLERLKPRVQRVVRKRFGAVPADAAEEDSFISELYAHLVEEAAAVLNHRIKNIEAEAVPSYV-----KCNAD--ESLEERVEHFCMLADDAEARGARKEAAARHEDRIEAAT 2409
++++K+L Y LN+ G YH + ERLKPR+QRVVR +F P E D F+S+LYA+L+ E VLN ++ E P K +A+ E LE +E F +LA DAEA G + RHEDR+ AA+
Sbjct: 2 EEQKKQLLYVLNTSGKYHEYKERLKPRIQRVVRVKFENKPNSVEEADRFVSQLYAYLMSELTKVLNRIFRDAEKLQEPQLTSSILPKDDAELLEELELELEKFRVLAIDAEANGDMETTTKRHEDRVAAAS 132
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: A0A7S2DFW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFW4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.380e-16 Identity = 48/105 (45.71%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1975 YAKLFLEPGGCAAGGELELTAQDREKRLFYALNSGGLYHSFLERLKPRVQRVVRKRFGAVPADAAEEDSFISELYAHLVEEAAAVLNHRIKNIEAEAVPSYVKCN 2289
Y +LF P AGGE L+ +R K+L Y LN+ G YH F ERLKPR+QRVVR RF P E D FIS+LY L+ E A V+N K P K +
Sbjct: 1 YNQLFPPP---EAGGEETLSRAERRKQLLYTLNTSGTYHKFKERLKPRIQRVVRHRFDKAPDSTEEADRFISKLYGFLMAELAKVVNRTFKEASLNLEPQVKKAS 102
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Match: F0Y9I9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I9_AURAN) HSP 1 Score: 68.6 bits (166), Expect = 5.190e-8 Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = 1
Query: 1774 MNEANTALLVTFALSRPLAKAPVRQETAVSVSDLFVPK----DVGPRTPPRDVEAELKEELDAFVQAVLMEYAKLFL--EPGGCAAGGELELTAQDREKRLFYALNSG------------GLYHSFLERLKPRVQRVVRKRFGAVPA----------DAAEEDSFISELYAHLVEEAAAVLNHRIKNIEAEAVP 2271
+++ T L + LS+PL APV + + L VPK + PRD + E K+E+D V + E AK+ + +P G A + + E++ Y LN+G G YH+F ERLKP +QRVVRK F P + E D F++ +YA LV V N R ++ E+ P
Sbjct: 380 LDDHGTELALGLTLSKPLV-APVDPSSKPTYEGL-VPKTKIASLCGTAGPRDFKVEFKDEIDDVVTTLSEEMAKIIISKDPTGKAPVEDFD------ERQWLYGLNTGTLEPADVGGKILGPYHAFKERLKPCIQRVVRKYFPDAPTTPHRDCDDWRELGEYDRFLNAVYAELVTNVIEVTNKRFRDAESNQEP 565 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8642.20120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8642.20120.1 >prot_M-pyrifera_M_contig8642.20120.1 ID=prot_M-pyrifera_M_contig8642.20120.1|Name=mRNA_M-pyrifera_M_contig8642.20120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=807bp MEKDPGQITAAVGRVCLRFKNKVKARNGQVFVKCVFAGEGSSLFVARPAPback to top mRNA from alignment at M-pyrifera_M_contig8642:2735..11239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8642.20120.1 ID=mRNA_M-pyrifera_M_contig8642.20120.1|Name=mRNA_M-pyrifera_M_contig8642.20120.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8505bp|location=Sequence derived from alignment at M-pyrifera_M_contig8642:2735..11239+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8642:2735..11239+ >mRNA_M-pyrifera_M_contig8642.20120.1 ID=mRNA_M-pyrifera_M_contig8642.20120.1|Name=mRNA_M-pyrifera_M_contig8642.20120.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4842bp|location=Sequence derived from alignment at M-pyrifera_M_contig8642:2735..11239+ (Macrocystis pyrifera P11B4 male)back to top |