mRNA_M-pyrifera_M_contig86327.20108.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86327.20108.1
Unique NamemRNA_M-pyrifera_M_contig86327.20108.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A5A8C567_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C567_CAFRO)

HSP 1 Score: 324 bits (831), Expect = 4.320e-103
Identity = 163/273 (59.71%), Postives = 190/273 (69.60%), Query Frame = 1
Query:    1 PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGT--DGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVFSFHTENGDVPPIRVVEDDGFT 813
            P+TSCPG  +ECSGHG CSG P Y CTC+ GWTGGDC+ R CPTG+AW D    AN AHA+AECS RGIC+R+ G+C C  G  GE CE+L CPGT  DG R CSGHG C +ME LA+    NG     +YG DR++ ATWDFRS QGC+C DGWEG  C+ R CPTGDD TT+ QFDEVQSL C    S +P F L+FR+  T PIA TA+A EVK ALE L  IGT+ V F   A+ ACSS   GT + FSF TENGD+PPI VVE D  +
Sbjct:  356 PITSCPGKSIECSGHGKCSGHPEYGCTCDRGWTGGDCADRLCPTGRAWMDLAYTANAAHAQAECSNRGICDRETGKCNCQAGFTGEGCEKLACPGTTADG-RTCSGHGTCHSMEGLAQLARTNGVSTPFTYGQDRNSPATWDFRSSQGCICFDGWEGFDCSLRACPTGDDPTTSDQFDEVQSLVCSHV-SGAPAFSLRFRDETTSPIAATASAAEVKAALEQLDAIGTLAVSFGPTASQACSS--AGTTITFSFQTENGDLPPIEVVESDSIS 624          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: D0RMF1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMF1_PHYIT)

HSP 1 Score: 236 bits (602), Expect = 5.890e-73
Identity = 128/276 (46.38%), Postives = 166/276 (60.14%), Query Frame = 1
Query:    4 VTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPT-AANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPA-----TDACSSTGGGTRMVFSFHTENGDVPPIRVVEDDGFT 813
            VT+CPG +  CSG G+C G P+Y C C  G+TGGDC++R CP G+AWFD PT  A+TAHA  ECS  G C+R  GECVC  G  G AC R+ CP       CSGHG C TME LA+   VNGE  + +YG   +   TW+   +QGCLC  GWEGH C+ R+CPTGDD  T  Q +EVQ L C+ S   S  F L+FR+A T  + +T  A  + +ALE+L+T+  + V + T       + AC + G  T  +  F T  GD+PP+R + D   T
Sbjct:   18 VTACPGEIA-CSGKGTCRGPPTYDCICNEGFTGGDCTERLCPKGRAWFDRPTDTADTAHALVECSNAGECDRTKGECVCLSGFTGAACNRMVCPND-----CSGHGTCYTMEQLAKRATVNGETMSFTYGAVPNKKETWEHDMIQGCLCSSGWEGHDCSLRSCPTGDDPMTLRQQNEVQLLVCKGS---SGFFSLKFRDAATPQLPFTVPAASLASALEALTTVEKVSVAYSTDTNGVTGSPACDAAGSNTIRI-KFLTNFGDLPPLRWILDGALT 283          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A5A8E442_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E442_CAFRO)

HSP 1 Score: 241 bits (616), Expect = 1.130e-71
Identity = 131/264 (49.62%), Postives = 161/264 (60.98%), Query Frame = 1
Query:    1 PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECP-GTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAAT-WDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVFSFHTENGDVPPI 786
            P+TSCPG+ +ECSGHG+CSG P+Y CTC+ GW GGDC+QR+CP G AWFD P A ++AHAEAECS RG CNR+   C C PG  GEACERL CP G  G   CS HGRC +M  LA E   NG+     YG       T WD R+  GCLCDDG+EG+AC+ R+CPTGDD  + G   E Q L C    +   T  L FR   T  +  TAT  E++ ALE+L T+  + +     +T A  S GG T  V  F    GD+P +
Sbjct:  290 PITSCPGTQVECSGHGTCSGHPTYKCTCDNGWMGGDCAQRTCPAGPAWFDSPVADDSAHAEAECSNRGHCNRETSLCACHPGFTGEACERLACPRGGPGMEECSAHGRCASMSQLAAEADTNGDPTPFRYGSASPGLTTAWDGRAAYGCLCDDGFEGYACSKRSCPTGDDPHSPGMH-ETQELVCTAPAAG--TVALTFRGRTTAALPTTATPAELQAALEALDTVEKVAIACT--STTAVCSVGGNTCRV-EFLLPLGDLPAM 547          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A482SIQ2_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIQ2_9ARCH)

HSP 1 Score: 232 bits (592), Expect = 1.680e-71
Identity = 129/278 (46.40%), Postives = 164/278 (58.99%), Query Frame = 1
Query:    1 PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEA--ECSARGICNRDAGECVCGPGTRGEACERLECPG--TDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVE-FDTPATDACSSTGGGTRMVFSFHTENGDVPPIRVVED--DGFT 813
            PV      ++ CSGHG C  +P+YTC C  GWTG DCS+R CP   AWF  P A N AH     ECS  G+C+R  G C C  G  G AC RL CPG   D    C+GHGRC+ M  LA+ N  NG L   +YG   +N  TWD   V GC CD+G+EG+ C+  TCPTGDD  T GQ+DE Q L+C  S ++  +  L FR+A+T P+  TAT  +VK ALE+L+TI  + VE  D  ATD+  +T G  + + +F TE G++P I  V    D FT
Sbjct:   16 PVIPYSPGIIACSGHGECRNNPTYTCECSDGWTGADCSERVCPKDLAWFGLPEADNKAHLATYLECSGVGLCDRSTGMCSCNLGFTGSACSRLACPGINADTPEGCNGHGRCVDMYTLAKINTKNGVLQNYTYGTIPNNPHTWDANRVFGCECDEGYEGYDCSLNTCPTGDDPLTRGQYDEQQILSCTDSDAEG-SIVLTFRDAVTTPLLPTATTQQVKRALEALTTIEEVVVETVDPSATDSLCTTSGN-QFIITFLTERGNLPMITSVMQNIDSFT 291          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A067D4T2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D4T2_SAPPC)

HSP 1 Score: 238 bits (607), Expect = 5.220e-71
Identity = 125/268 (46.64%), Postives = 160/268 (59.70%), Query Frame = 1
Query:    1 PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAE-CSARGICNRDAGECVCGPGTRGEACERLECP-GTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVFSFHTENGDVPPIRVVE 798
            P++ CPG  L CSGHG C+G P + C C  GWT GDCSQR+C TG +WF  PT+ N AH   E CS  G+C+   G C C P   G ACE L+CP G D    CSGHG CLT+  LA      G     +YG + +N ATWD   +QGC CDDG+ GH C  R CPTGDD  T GQ + VQ +TC  S   S  F+L FR A TDP+ + A   EV+TAL SLSTI  + +++    T AC    GG  M+ +F  + G +PP+++++
Sbjct:  269 PISGCPG-YLPCSGHGMCTGPPGFACKCSPGWTSGDCSQRTCTTGASWFALPTSTNVAHKTQETCSNAGLCDSTTGMCTCFPPFTGAACELLDCPYGPDSAAPCSGHGTCLTLAELAASTTTQGLPAGFTYGANPNNPATWDAAMIQGCKCDDGFTGHDCTQRVCPTGDDPVTMGQTNAVQQVTCAAS---SGVFQLGFRGAYTDPLPFNAPVLEVQTALLSLSTIHGLSLQYS--HTGACV---GGNSMILTFTQDFGALPPVQLLD 527          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: D0NFI0_PHYIT (Tenascin-like protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NFI0_PHYIT)

HSP 1 Score: 238 bits (607), Expect = 2.390e-70
Identity = 128/276 (46.38%), Postives = 166/276 (60.14%), Query Frame = 1
Query:    4 VTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPT-AANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPA-----TDACSSTGGGTRMVFSFHTENGDVPPIRVVEDDGFT 813
            VT+CPG +  CSG G+C G P+Y C C  G+TGGDC++R CP G+AWFD PT  A+TAH   ECS  G C+R  GECVC  G  G AC R+ CP       CSGHG C TME LA+   VNGE  + +YG   +   TW+   +QGCLC  GWEGH C+ R+CPTGDD  T  Q +EVQ L C+ S   S  F L+FR+A T  + +T  A  + +ALE+L+T+G + V + T       + AC + G  T  +  F T  GD+PP+R + D   T
Sbjct:  341 VTACPGEIA-CSGKGTCRGPPTYDCICNEGFTGGDCTERLCPKGRAWFDRPTDTADTAHVLVECSNAGECDRTKGECVCLSGFTGAACNRMVCPND-----CSGHGTCYTMEQLAKRATVNGETMSFTYGAVPNKKETWEHDMIQGCLCSSGWEGHDCSLRSCPTGDDPMTLRQQNEVQLLVCKGS---SGFFSLKFRDAATPQLPFTVPAASLASALEALTTVGKVSVAYSTDTNGVTGSSACDAAGSNTIRI-EFLTNFGDLPPLRWILDGALT 606          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: W4FCZ9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCZ9_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.590e-69
Identity = 124/267 (46.44%), Postives = 163/267 (61.05%), Query Frame = 1
Query:    4 VTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVFSFHTENGDVPPIRVVEDD 804
            +T+CPG V+ CSGHG C+GSP Y C C  GWT GDCS R+CP G AWFD    +N AH  A CS  G+C+   G C C PG  G AC+R+ CPG  G   CSG G+CLT E LA     NG+     YG   +N ATWDF  +QGC+CD G+ GH C+ R CPTGD+  TTGQ +EVQ++TC  +   + TF+L+FR A T PI+  AT  ++ +AL  L   G + V + +    AC ++G    +  +F TE GD+P ++V   D
Sbjct:  342 ITACPG-VVTCSGHGYCTGSPQYACVCFGGWTSGDCSVRTCPQGPAWFDMAVQSNDAHRYAICSNAGVCDSATGVCNCAPGFEGSACQRMRCPGV-GDPPCSGRGQCLTQERLALLTTANGDPTPLVYGSIPNNPATWDFNKIQGCVCDKGYGGHDCSQRVCPTGDNPRTTGQSNEVQTITC--TAITASTFQLRFRGATTVPISTAATTAQMASAL--LPVTGFVRVTYASGVV-ACKASGPANVITVAFVTELGDLPAMQVTGVD 601          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A6G0XBZ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBZ7_9STRA)

HSP 1 Score: 235 bits (600), Expect = 2.300e-69
Identity = 124/264 (46.97%), Postives = 165/264 (62.50%), Query Frame = 1
Query:    4 VTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMV-FSFHTENGDVPPIRV 792
            +TSCPG ++ CSGHG CSGSP Y C C  GWT GDCS R+CP   AWFD     N AH  A CS  G+C+   G+C C  G  G AC+R++CPG  G   CSGHG+CL+   LA  + +NG+     YG   +N +TWD   VQGC CD G+ GH C+ R CP GD+  TTGQ +E+Q++TC  +   + TF+L FR A T P+A ++TA ++ TAL+SL TI  + V F T +T    +TG  T +V   F +E G++P +RV
Sbjct:  343 ITSCPG-LVTCSGHGYCSGSPQYACMCFAGWTSGDCSVRTCPQDLAWFDMAGGNNAAHGLAVCSNAGVCDPATGQCNCAQGFEGAACQRMKCPGA-GDPPCSGHGQCLSQARLALLSSLNGDPTPFLYGSIPNNPSTWDSNKVQGCYCDPGFGGHDCSLRLCPAGDNPRTTGQVNEIQTITC--TAVSASTFQLSFRSATTVPLATSSTASQITTALQSLPTISQVQVTFSTGSTFC--TTGSPTNVVSVLFLSEMGNLPAMRV 600          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: T0QAN9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QAN9_SAPDV)

HSP 1 Score: 235 bits (600), Expect = 3.180e-69
Identity = 124/268 (46.27%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    1 PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPTAANTAHAEAE-CSARGICNRDAGECVCGPGTRGEACERLECP-GTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVFSFHTENGDVPPIRVVE 798
            P++ CPG  L CSGHG CSGSP++ C C  GWT GDCSQR+CPTG +WF  PT+ N AH   E CS  G+C+   G C C P   G ACE L+CP G D    CSGHG CLT+  LA    + G     +YG + +N ATWD   +QGC CDDG+ GH C  R CPTGDD  TTGQ + VQ +TC  S   S  F+L FR A TDP+ + A   +V+ AL  LST+  + +++    T AC    GG  M  +F  + G +P +++++
Sbjct:  359 PISGCPG-YLPCSGHGMCSGSPAFACKCSPGWTSGDCSQRACPTGASWFALPTSTNVAHKTPETCSNTGLCDPTTGTCTCFPPFTGAACELLDCPYGPDSATPCSGHGSCLTLAELAAATTMQGLPAGFTYGANPNNPATWDATMIQGCKCDDGFTGHDCNQRVCPTGDDPDTTGQNNAVQQVTCAAS---SGVFQLGFRGAYTDPLPFNAPMLDVQAALLGLSTLHGLSLQYS--HTGACV---GGNSMTLTFTQDFGALPTVQLLD 617          
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Match: A0A6A3JA59_9STRA (EGF-like domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JA59_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.060e-68
Identity = 125/276 (45.29%), Postives = 164/276 (59.42%), Query Frame = 1
Query:    4 VTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFDYPT-AANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTRVCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCDDGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREAITDPIAYTATADEVKTALESLSTIGTIDVEFDTPA-----TDACSSTGGGTRMVFSFHTENGDVPPIRVVEDDGFT 813
            VT+CPG +  CSG G+C G P+Y C C  G+TGGDC++R CP G++WFD P    +TAHA  ECS  G C+R  G+C+C  G  G AC R+ CP       CSGHG C TME LA+   +NGE  A +YG   +   TWD+  VQGCLC  GWEGH CA R+CPTGDD  T  Q +EVQ L C+ S   S  F L+FR+A T  + +   A  + +ALE+L+TIG + V + T       + AC++  G   M   F T  G++P +R + D   T
Sbjct:  242 VTACPGEIA-CSGQGTCRGPPTYDCICNEGFTGGDCNERLCPKGRSWFDRPIDTTDTAHALVECSNAGECDRTKGDCICSAGFTGAACNRMFCPND-----CSGHGTCYTMEQLAKSATLNGETMAWTYGAVPNKKETWDYDMVQGCLCSPGWEGHDCALRSCPTGDDPMTLRQQNEVQILVCKGS---SGFFTLKFRDAATPQLPFNVPAASLGSALEALTTIGKVSVTYSTDTNGVTGSPACNA-AGSNAMRIEFLTNFGNLPQLRWILDGALT 507          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86327.20108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C567_CAFRO4.320e-10359.71Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
D0RMF1_PHYIT5.890e-7346.38Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A5A8E442_CAFRO1.130e-7149.62Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A482SIQ2_9ARCH1.680e-7146.40EGF-like domain-containing protein n=1 Tax=archaeo... [more]
A0A067D4T2_SAPPC5.220e-7146.64Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
D0NFI0_PHYIT2.390e-7046.38Tenascin-like protein n=12 Tax=Phytophthora TaxID=... [more]
W4FCZ9_9STRA1.590e-6946.44Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0XBZ7_9STRA2.300e-6946.97Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
T0QAN9_SAPDV3.180e-6946.27Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A6A3JA59_9STRA1.060e-6845.29EGF-like domain-containing protein n=5 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86327contigM-pyrifera_M_contig86327:37..849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.7
Seed ortholog evalue6.1e-66
Seed eggNOG ortholog157072.XP_008863415.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsKOG1225@1,KOG1225@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size813
Cds size813
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816773.3276427-CDS-M-pyrifera_M_contig86327:36..8491622816773.3276427-CDS-M-pyrifera_M_contig86327:36..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86327 37..849 -
1692278170.0269356-CDS-M-pyrifera_M_contig86327:36..8491692278170.0269356-CDS-M-pyrifera_M_contig86327:36..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86327 37..849 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86327.20108.1prot_M-pyrifera_M_contig86327.20108.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86327 37..849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86327.20108.1

>prot_M-pyrifera_M_contig86327.20108.1 ID=prot_M-pyrifera_M_contig86327.20108.1|Name=mRNA_M-pyrifera_M_contig86327.20108.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=271bp
PVTSCPGSVLECSGHGSCSGSPSYTCTCEVGWTGGDCSQRSCPTGKAWFD
YPTAANTAHAEAECSARGICNRDAGECVCGPGTRGEACERLECPGTDGTR
VCSGHGRCLTMEMLAEENMVNGELDAQSYGLDRSNAATWDFRSVQGCLCD
DGWEGHACADRTCPTGDDVTTTGQFDEVQSLTCEKSGSDSPTFRLQFREA
ITDPIAYTATADEVKTALESLSTIGTIDVEFDTPATDACSSTGGGTRMVF
SFHTENGDVPPIRVVEDDGFT
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mRNA from alignment at M-pyrifera_M_contig86327:37..849-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86327.20108.1 ID=mRNA_M-pyrifera_M_contig86327.20108.1|Name=mRNA_M-pyrifera_M_contig86327.20108.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig86327:37..849- (Macrocystis pyrifera P11B4 male)
CCAGTCACATCTTGTCCTGGAAGTGTTTTGGAGTGTTCTGGACATGGATC ATGTTCTGGTTCTCCATCCTACACATGTACCTGTGAGGTTGGTTGGACTG GTGGTGATTGTAGCCAACGTTCTTGTCCTACCGGAAAGGCATGGTTTGAC TATCCCACAGCTGCGAATACAGCACATGCCGAAGCTGAGTGTTCTGCGCG TGGAATTTGCAACAGAGATGCTGGAGAATGTGTTTGTGGTCCTGGAACAC GTGGGGAGGCTTGTGAAAGGTTGGAATGCCCTGGAACTGATGGAACAAGA GTATGTTCTGGGCATGGACGTTGTCTTACAATGGAAATGCTTGCAGAAGA AAACATGGTGAATGGTGAACTTGATGCGCAATCATATGGATTGGATCGCT CCAATGCAGCAACGTGGGATTTCCGTTCCGTCCAAGGTTGCTTGTGTGAT GACGGTTGGGAAGGACATGCATGCGCAGATCGCACATGTCCCACTGGCGA TGATGTTACCACAACAGGACAATTCGATGAAGTCCAATCCCTCACCTGTG AAAAATCTGGATCTGATTCTCCAACATTCCGTCTCCAATTCAGAGAAGCA ATCACAGACCCGATTGCCTACACTGCAACTGCAGATGAAGTCAAAACAGC TCTTGAATCTCTCAGCACCATTGGCACCATCGATGTCGAATTCGACACAC CAGCAACAGATGCTTGTAGCTCCACAGGAGGTGGCACACGAATGGTCTTT TCCTTCCACACTGAAAACGGTGACGTTCCTCCCATCCGCGTTGTGGAAGA CGATGGCTTCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86327:37..849-

>mRNA_M-pyrifera_M_contig86327.20108.1 ID=mRNA_M-pyrifera_M_contig86327.20108.1|Name=mRNA_M-pyrifera_M_contig86327.20108.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1626bp|location=Sequence derived from alignment at M-pyrifera_M_contig86327:37..849- (Macrocystis pyrifera P11B4 male)
CCAGTCACATCTTGTCCTGGAAGTGTTTTGGAGTGTTCTGGACATGGATC
ATGTTCTGGTTCTCCATCCTACACATGTACCTGTGAGGTTGGTTGGACTG
GTGGTGATTGTAGCCAACGTTCTTGTCCTACCGGAAAGGCATGGTTTGAC
TATCCCACAGCTGCGAATACAGCACATGCCGAAGCTGAGTGTTCTGCGCG
TGGAATTTGCAACAGAGATGCTGGAGAATGTGTTTGTGGTCCTGGAACAC
GTGGGGAGGCTTGTGAAAGGTTGGAATGCCCTGGAACTGATGGAACAAGA
GTATGTTCTGGGCATGGACGTTGTCTTACAATGGAAATGCTTGCAGAAGA
AAACATGGTGAATGGTGAACTTGATGCGCAATCATATGGATTGGATCGCT
CCAATGCAGCAACGTGGGATTTCCGTTCCGTCCAAGGTTGCTTGTGTGAT
GACGGTTGGGAAGGACATGCATGCGCAGATCGCACATGTCCCACTGGCGA
TGATGTTACCACAACAGGACAATTCGATGAAGTCCAATCCCTCACCTGTG
AAAAATCTGGATCTGATTCTCCAACATTCCGTCTCCAATTCAGAGAAGCA
ATCACAGACCCGATTGCCTACACTGCAACTGCAGATGAAGTCAAAACAGC
TCTTGAATCTCTCAGCACCATTGGCACCATCGATGTCGAATTCGACACAC
CAGCAACAGATGCTTGTAGCTCCACAGGAGGTGGCACACGAATGGTCTTT
TCCTTCCACACTGAAAACGGTGACGTTCCTCCCATCCGCGTTGTGGAAGA
CGATGGCTTCACCCCAGTCACATCTTGTCCTGGAAGTGTTTTGGAGTGTT
CTGGACATGGATCATGTTCTGGTTCTCCATCCTACACATGTACCTGTGAG
GTTGGTTGGACTGGTGGTGATTGTAGCCAACGTTCTTGTCCTACCGGAAA
GGCATGGTTTGACTATCCCACAGCTGCGAATACAGCACATGCCGAAGCTG
AGTGTTCTGCGCGTGGAATTTGCAACAGAGATGCTGGAGAATGTGTTTGT
GGTCCTGGAACACGTGGGGAGGCTTGTGAAAGGTTGGAATGCCCTGGAAC
TGATGGAACAAGAGTATGTTCTGGGCATGGACGTTGTCTTACAATGGAAA
TGCTTGCAGAAGAAAACATGGTGAATGGTGAACTTGATGCGCAATCATAT
GGATTGGATCGCTCCAATGCAGCAACGTGGGATTTCCGTTCCGTCCAAGG
TTGCTTGTGTGATGACGGTTGGGAAGGACATGCATGCGCAGATCGCACAT
GTCCCACTGGCGATGATGTTACCACAACAGGACAATTCGATGAAGTCCAA
TCCCTCACCTGTGAAAAATCTGGATCTGATTCTCCAACATTCCGTCTCCA
ATTCAGAGAAGCAATCACAGACCCGATTGCCTACACTGCAACTGCAGATG
AAGTCAAAACAGCTCTTGAATCTCTCAGCACCATTGGCACCATCGATGTC
GAATTCGACACACCAGCAACAGATGCTTGTAGCTCCACAGGAGGTGGCAC
ACGAATGGTCTTTTCCTTCCACACTGAAAACGGTGACGTTCCTCCCATCC
GCGTTGTGGAAGACGATGGCTTCACC
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