mRNA_M-pyrifera_M_contig86255.20098.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86255.20098.1
Unique NamemRNA_M-pyrifera_M_contig86255.20098.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A2E7KIJ8_9PLAN (PMT domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIJ8_9PLAN)

HSP 1 Score: 540 bits (1390), Expect = 2.290e-188
Identity = 268/270 (99.26%), Postives = 268/270 (99.26%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSGKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRKEYEQRVKAQSQAEEDEPGQR 810
            WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQII LQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAAL ELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSGKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRKEYEQRVKAQSQAEEDEPGQR
Sbjct:  365 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIALQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALAELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSGKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRKEYEQRVKAQSQAEEDEPGQR 634          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A5A8AW43_9PLAN (Glycosyltransferase family 39 protein n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8AW43_9PLAN)

HSP 1 Score: 281 bits (720), Expect = 2.030e-87
Identity = 132/243 (54.32%), Postives = 178/243 (73.25%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSG-KDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVI 726
            W+  +  L P    ++ +  S   + S T PT HAP +WL+A  VLL ++L SRLNLGQRYLL  YPLL LFT+DQ+W W Q+++  L++F   CI FQ   + +++PHYL+YFN   GGP +G+ YLLDSNLDWGQDLPA + AL+EL   DR++CL+ YFGTALPESYGIK F+++E +P NP DWKYL++S N+LQG Y+  +DP+  FR + PLKR GYS++++DLQSPEARQAL+  +
Sbjct:  368 WRDVKPLLRPAEG-EEGDLTSIGRQQSNT-PTSHAPLIWLMAALVLLGMSLTSRLNLGQRYLLTLYPLLYLFTIDQLWRWFQERRVWLWVFSAICIGFQCASISSIQPHYLAYFNDSVGGPSNGHLYLLDSNLDWGQDLPAVKKALDELPAEDRDKCLLYYFGTALPESYGIKGFDLKESLPENPADWKYLILSVNHLQGFYTQVEDPFAAFRKITPLKRAGYSIYIYDLQSPEARQALQEAL 608          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A518ICB6_9PLAN (Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518ICB6_9PLAN)

HSP 1 Score: 278 bits (712), Expect = 2.100e-86
Identity = 137/245 (55.92%), Postives = 178/245 (72.65%), Query Frame = 1
Query:   22 LLPILARD--------QTEAPS-TEDETSETA---PTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALE 717
            L P   RD         +E P  T++E   TA   PT HAP +WLLA AVLL L+L SRLNLGQRYLL  YPLL LFT+DQ+W W QK+  ++Y F G CI FQI+ + +++PHYL+YFNRL GGPE+G+QYLLDSNLDWGQDLPA +AAL++L    R++CL+ YFGTA P++YGI A +++E +P   + W YL +S N+LQGLY+ G DP+  FRSL P KR GYS++L+DL +PEA+Q L+
Sbjct:  359 LCPFFLRDCWNTWRHPDSEFPEITKEECPSTAGQQPTHHAPQIWLLAMAVLLGLSLTSRLNLGQRYLLTIYPLLFLFTIDQVWHWFQKRTYLVYTFAGLCIGFQILAITSIQPHYLAYFNRLVGGPEAGHQYLLDSNLDWGQDLPALKAALDQLPSEKRDQCLLYYFGTARPDAYGISALSLKESLPEKLDQWNYLALSTNHLQGLYTHGTDPFAGFRSLEPWKRAGYSIYLYDLTTPEAKQRLQ 603          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A518A663_9PLAN (PMT_2 domain-containing protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A663_9PLAN)

HSP 1 Score: 278 bits (711), Expect = 4.020e-86
Identity = 137/247 (55.47%), Postives = 176/247 (71.26%), Query Frame = 1
Query:   22 LLPILARD-----------QTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSG-KDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVI 726
            L+P L RD           + +  S E +   T PT HAP +WLLA  VLL ++L SRLNLGQRYLL  YPLL LF +DQ+W W Q+KK  L+     CI FQ   + +V+PHYL+YFN   GGP SG  YLLDSNLDWGQDLPA + AL+EL   DR++CL+ YFGTALPESYGI+ F+++E +P +PEDWKYL++S N+LQGLY+  +DP+  FR + PLKR GYS+F++DLQ+PEARQAL+  +
Sbjct:  359 LIPWLWRDFKLLLRPAEGAEGDLASAEQKKVNT-PTSHAPLIWLLAAVVLLGMSLTSRLNLGQRYLLTLYPLLYLFNIDQLWRWFQEKKVWLWALTAICIGFQCASICSVQPHYLAYFNDSVGGPSSGRFYLLDSNLDWGQDLPAVKKALDELPAEDRDQCLLYYFGTALPESYGIEGFDLKESLPEDPEDWKYLILSVNHLQGLYTQVEDPFAAFRKITPLKRAGYSIFIYDLQTPEARQALQEAL 604          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A2E2C273_9PLAN (PMT_2 domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C273_9PLAN)

HSP 1 Score: 274 bits (700), Expect = 1.370e-84
Identity = 137/254 (53.94%), Postives = 178/254 (70.08%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRKEYE 759
            W+  R     I   DQ+     + ET E  PT HAP +WLLAG +LL +AL SRLNLGQRYLL  YPLL LFTVDQIW W   +  +LY F   CI  QII + +V+P+YLSYFN   GGP +G  YLLDSNLDWGQDLPA +A L+EL   DRERCL+ YFGT  P+ YGI AF+MR+++P N ++W YL +SANYLQGLY+  +DP+  FRS+ P+ + GYS++LFDL +P+A++AL+  + V  +M++  E
Sbjct:  370 WKTVRHRAADIPPIDQSS--DRQSETGE--PTSHAPLIWLLAGGMLLGMALTSRLNLGQRYLLTLYPLLFLFTVDQIWRWFHFRAWLLYTFGSLCICLQIISITSVQPNYLSYFNDSIGGPAAGRFYLLDSNLDWGQDLPALKARLDELPLQDRERCLLYYFGTGSPQGYGISAFDMRQKLPENVDEWNYLALSANYLQGLYTQARDPFAGFRSIKPVGQAGYSIYLFDLSTPQAQKALQHAVDVLQKMQESKE 619          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A517RFJ5_9PLAN (PMT_2 domain-containing protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RFJ5_9PLAN)

HSP 1 Score: 273 bits (698), Expect = 2.530e-84
Identity = 132/243 (54.32%), Postives = 179/243 (73.66%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVI 726
            W+ +R  +  I A +   +PST  +     PT HAP +W+LA AVLL ++L SRLNLGQRYLL  YPL+ LFT+DQ   W + K  ++Y F G C  FQI+ + +++PHYL+YFN L GGPE+G++YLLDSN+DWGQDLPA +AAL +L P DR+RCL+ YFGTA PE+YGI   +++E +P + + W  L +S N+LQGLY+ GKDP++ FRSL PLKR GYS+FL+DL++PEA+QAL+  I
Sbjct:  371 WRHSRGEVPEIAAEN---SPSTMGQE----PTNHAPLIWILAIAVLLGMSLTSRLNLGQRYLLTVYPLMFLFTIDQFMRWFKNKTFLVYTFAGLCFGFQILAITSIQPHYLAYFNGLVGGPEAGHKYLLDSNMDWGQDLPALKAALADLPPDDRDRCLLYYFGTARPEAYGISVLSLKETLPDDIDRWSSLALSVNHLQGLYTQGKDPFEGFRSLKPLKRAGYSIFLYDLKTPEAKQALQESI 606          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A517V883_9PLAN (PMT_2 domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V883_9PLAN)

HSP 1 Score: 271 bits (693), Expect = 1.500e-83
Identity = 134/245 (54.69%), Postives = 172/245 (70.20%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQV 732
            W+  R     I   DQ   P+ + ET E  PT HAP VWLLAG +LL + L SRLNLGQRYLL  YPLL L T+DQIW W Q +  +LY     CI FQII + +VRP+YLSYFN   GGP +G  YLLDSNLDWGQDLP+ +A L++L P DR+RCL+ YFGT  P+ YG+ A +MR+++P   ++W YL +SANYLQGLY+  KDP+  FRS+ P+ + GYS++LFDL +P+AR+AL+  I V
Sbjct:  370 WKSVRHRPAAIPPEDQI--PNRQGETRE--PTSHAPLVWLLAGGMLLGMTLTSRLNLGQRYLLTLYPLLFLSTIDQIWRWFQFRAWLLYALGSVCICFQIISITSVRPNYLSYFNDSIGGPAAGRFYLLDSNLDWGQDLPSLKALLDKLPPEDRDRCLLYYFGTGSPQGYGVSALDMRQKLPEILDEWNYLALSANYLQGLYTQAKDPFSGFRSIRPVAQAGYSIYLFDLTTPQAREALQHAIDV 610          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A2D5H4P9_9PLAN (PMT_2 domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A2D5H4P9_9PLAN)

HSP 1 Score: 264 bits (674), Expect = 1.110e-80
Identity = 129/253 (50.99%), Postives = 173/253 (68.38%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTE-APSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRKE 753
            WQ  R     +   DQ    P  + E     PT HAP +WLLA  VL  +AL SRLNLGQRYLL  YPL+ LFT+DQIW W Q +  +LY F   CI FQI+ + +V+P+YLSYFN   GGP  G  YLLDSNLDWGQDLPA + ALE+L   +R+R L+ YFGT  P++YGI  +N+++ +P N +DWKYL +SANYLQGLY+  KDP+  FR++ P+ + GY+++LFDL +P+AR+A+   + +  EM+K+
Sbjct:  375 WQSVRYRRASMPTVDQNRIGPDADSE-----PTSHAPLIWLLAMVVLFGMALTSRLNLGQRYLLTLYPLMFLFTIDQIWRWFQFRAWLLYAFACLCICFQILSITSVQPNYLSYFNDSIGGPAGGRFYLLDSNLDWGQDLPALKTALEQLPSENRDRTLLYYFGTGDPQAYGISTYNLKQNLPENLDDWKYLALSANYLQGLYTEAKDPFAGFRTIQPVGQAGYTIYLFDLATPQAREAMRHAVDILREMQKQ 622          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A517PNG0_9PLAN (PMT_2 domain-containing protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517PNG0_9PLAN)

HSP 1 Score: 250 bits (639), Expect = 1.570e-75
Identity = 119/245 (48.57%), Postives = 173/245 (70.61%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYS-GKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQV 732
            W   ++ + P+ A   +E P  E +T  +APT HAP +W+LA  V + ++L SRLNLGQRYLL+ YPLL +F++DQ+W W + K  +L       I FQ+  + +V+P+YLSYFN   GGP++G++YLLDSNLDWGQDLPA +  ++EL   D++  LI YFGTA P+++GIKA  +   +  +P+ WKY++ISAN+LQGLY+ G+DP  +FR L P K   YS+++FDLQSPEA+QAL+  +++
Sbjct:  370 WGDLKRLVRPVPA-PVSELPEEEQQTDVSAPTSHAPLIWVLAVVVFMGMSLTSRLNLGQRYLLLLYPLLFMFSIDQMWRWFEGKLGLLVTVSVALIGFQVQSIVSVQPNYLSYFNDGIGGPQAGHKYLLDSNLDWGQDLPALKKIMDELPLEDQKNSLIYYFGTARPDAFGIKAAPLHANLDADPDQWKYMIISANHLQGLYAHGEDPCAEFRKLEPFKMANYSIYVFDLQSPEAKQALKHCLKI 613          
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Match: A0A517V880_9PLAN (PMT_2 domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V880_9PLAN)

HSP 1 Score: 249 bits (637), Expect = 4.260e-75
Identity = 120/238 (50.42%), Postives = 162/238 (68.07%), Query Frame = 1
Query:    1 WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLALMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQIIPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELSPADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQGLYSGKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQAL 714
            W+ +   L+  ++ D  E      +T+    T HAP +WLLAG VLL + L SR+N+GQRYLL  YPL++LFT+DQ   W Q +   + L C  C+ FQ++ + +V+PH+LSYFN   GGP +G+  LLDSNLDWGQDLPA +  + EL P DRE+C++ YFGTALP+SYGIK   +R+ +  N    KYLV+SA +L GLY   DP++ FRS+ P K VGYSMF+F L +PEA+QAL
Sbjct:  370 WKLSSNTLIDEISADPKEYSPLRSQTA----TYHAPAIWLLAGLVLLGMLLTSRINIGQRYLLTLYPLMVLFTIDQFCHWNQHRFYRVILLCILCVGFQVVSIASVKPHFLSYFNSFVGGPSAGHLLLLDSNLDWGQDLPALQKMIAELPPEDREKCVLYYFGTALPKSYGIKVHPLRDDVLDNLNQRKYLVLSAGFLHGLYMDHDPFEAFRSIEPFKHVGYSMFVFKLDTPEAKQAL 603          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86255.20098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KIJ8_9PLAN2.290e-18899.26PMT domain-containing protein n=3 Tax=Gimesia TaxI... [more]
A0A5A8AW43_9PLAN2.030e-8754.32Glycosyltransferase family 39 protein n=2 Tax=Gime... [more]
A0A518ICB6_9PLAN2.100e-8655.92Dolichyl-phosphate-mannose-protein mannosyltransfe... [more]
A0A518A663_9PLAN4.020e-8655.47PMT_2 domain-containing protein n=3 Tax=Gimesia pa... [more]
A0A2E2C273_9PLAN1.370e-8453.94PMT_2 domain-containing protein n=3 Tax=Planctomyc... [more]
A0A517RFJ5_9PLAN2.530e-8454.32PMT_2 domain-containing protein n=1 Tax=Gimesia al... [more]
A0A517V883_9PLAN1.500e-8354.69PMT_2 domain-containing protein n=1 Tax=Gimesia al... [more]
A0A2D5H4P9_9PLAN1.110e-8050.99PMT_2 domain-containing protein n=9 Tax=Planctomyc... [more]
A0A517PNG0_9PLAN1.570e-7548.57PMT_2 domain-containing protein n=4 Tax=Gimesia Ta... [more]
A0A517V880_9PLAN4.260e-7550.42PMT_2 domain-containing protein n=1 Tax=Gimesia al... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86255contigM-pyrifera_M_contig86255:37..849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score263.8
Seed ortholog evalue8.5e-68
Seed eggNOG ortholog344747.PM8797T_30681
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
EggNOG OGs2J242@203682,COG1807@1,COG1807@2
COG Functional cat.M
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size813
Cds size813
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816772.912076-CDS-M-pyrifera_M_contig86255:36..8491622816772.912076-CDS-M-pyrifera_M_contig86255:36..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86255 37..849 -
1692278169.8103366-CDS-M-pyrifera_M_contig86255:36..8491692278169.8103366-CDS-M-pyrifera_M_contig86255:36..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86255 37..849 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86255.20098.1prot_M-pyrifera_M_contig86255.20098.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86255 37..849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86255.20098.1

>prot_M-pyrifera_M_contig86255.20098.1 ID=prot_M-pyrifera_M_contig86255.20098.1|Name=mRNA_M-pyrifera_M_contig86255.20098.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=271bp
WQPARKNLLPILARDQTEAPSTEDETSETAPTPHAPCVWLLAGAVLLTLA
LMSRLNLGQRYLLIFYPLLILFTVDQIWPWLQKKKAVLYLFCGGCILFQI
IPLQTVRPHYLSYFNRLAGGPESGYQYLLDSNLDWGQDLPAARAALEELS
PADRERCLICYFGTALPESYGIKAFNMRERMPTNPEDWKYLVISANYLQG
LYSGKDPYQDFRSLIPLKRVGYSMFLFDLQSPEARQALETVIQVSIEMRK
EYEQRVKAQSQAEEDEPGQR*
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mRNA from alignment at M-pyrifera_M_contig86255:37..849-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86255.20098.1 ID=mRNA_M-pyrifera_M_contig86255.20098.1|Name=mRNA_M-pyrifera_M_contig86255.20098.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig86255:37..849- (Macrocystis pyrifera P11B4 male)
TGGCAGCCTGCCAGGAAAAATCTGCTGCCCATTTTAGCCCGGGATCAGAC CGAAGCGCCCTCCACTGAAGACGAAACCTCAGAGACCGCGCCTACGCCAC ACGCGCCCTGTGTCTGGTTGCTGGCGGGAGCGGTACTGCTAACACTGGCG TTGATGAGCCGATTGAATCTGGGGCAACGTTACCTGCTGATTTTCTATCC GCTGTTGATTCTGTTTACCGTCGATCAGATCTGGCCCTGGCTGCAGAAGA AGAAAGCAGTGCTCTACCTGTTTTGTGGCGGTTGTATCCTGTTTCAGATT ATTCCGCTGCAGACTGTCAGGCCACACTACCTGTCGTATTTCAATCGACT CGCCGGCGGTCCCGAGTCGGGCTATCAGTACCTGCTCGATTCCAATCTGG ACTGGGGGCAGGATCTGCCCGCGGCCAGAGCGGCCCTGGAGGAACTTTCC CCCGCAGACCGGGAACGTTGTCTGATCTGCTATTTTGGCACCGCGTTGCC GGAATCGTATGGGATTAAAGCCTTCAATATGCGGGAGCGGATGCCGACCA ATCCTGAAGATTGGAAGTATCTTGTGATCTCGGCCAACTATCTGCAAGGT CTGTATTCCGGGAAAGACCCTTATCAGGATTTTCGTTCGCTGATTCCCCT GAAGCGGGTCGGTTACTCCATGTTCCTGTTTGACCTGCAGAGCCCCGAAG CCCGGCAGGCCCTCGAGACGGTGATTCAGGTCAGCATCGAAATGCGGAAA GAGTACGAGCAACGAGTCAAAGCACAATCGCAGGCAGAGGAAGACGAGCC GGGGCAGCGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86255:37..849-

>mRNA_M-pyrifera_M_contig86255.20098.1 ID=mRNA_M-pyrifera_M_contig86255.20098.1|Name=mRNA_M-pyrifera_M_contig86255.20098.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1626bp|location=Sequence derived from alignment at M-pyrifera_M_contig86255:37..849- (Macrocystis pyrifera P11B4 male)
TGGCAGCCTGCCAGGAAAAATCTGCTGCCCATTTTAGCCCGGGATCAGAC
CGAAGCGCCCTCCACTGAAGACGAAACCTCAGAGACCGCGCCTACGCCAC
ACGCGCCCTGTGTCTGGTTGCTGGCGGGAGCGGTACTGCTAACACTGGCG
TTGATGAGCCGATTGAATCTGGGGCAACGTTACCTGCTGATTTTCTATCC
GCTGTTGATTCTGTTTACCGTCGATCAGATCTGGCCCTGGCTGCAGAAGA
AGAAAGCAGTGCTCTACCTGTTTTGTGGCGGTTGTATCCTGTTTCAGATT
ATTCCGCTGCAGACTGTCAGGCCACACTACCTGTCGTATTTCAATCGACT
CGCCGGCGGTCCCGAGTCGGGCTATCAGTACCTGCTCGATTCCAATCTGG
ACTGGGGGCAGGATCTGCCCGCGGCCAGAGCGGCCCTGGAGGAACTTTCC
CCCGCAGACCGGGAACGTTGTCTGATCTGCTATTTTGGCACCGCGTTGCC
GGAATCGTATGGGATTAAAGCCTTCAATATGCGGGAGCGGATGCCGACCA
ATCCTGAAGATTGGAAGTATCTTGTGATCTCGGCCAACTATCTGCAAGGT
CTGTATTCCGGGAAAGACCCTTATCAGGATTTTCGTTCGCTGATTCCCCT
GAAGCGGGTCGGTTACTCCATGTTCCTGTTTGACCTGCAGAGCCCCGAAG
CCCGGCAGGCCCTCGAGACGGTGATTCAGGTCAGCATCGAAATGCGGAAA
GAGTACGAGCAACGAGTCAAAGCACAATCGCAGGCAGAGGAAGACGAGCC
GGGGCAGCGCTGATGGCAGCCTGCCAGGAAAAATCTGCTGCCCATTTTAG
CCCGGGATCAGACCGAAGCGCCCTCCACTGAAGACGAAACCTCAGAGACC
GCGCCTACGCCACACGCGCCCTGTGTCTGGTTGCTGGCGGGAGCGGTACT
GCTAACACTGGCGTTGATGAGCCGATTGAATCTGGGGCAACGTTACCTGC
TGATTTTCTATCCGCTGTTGATTCTGTTTACCGTCGATCAGATCTGGCCC
TGGCTGCAGAAGAAGAAAGCAGTGCTCTACCTGTTTTGTGGCGGTTGTAT
CCTGTTTCAGATTATTCCGCTGCAGACTGTCAGGCCACACTACCTGTCGT
ATTTCAATCGACTCGCCGGCGGTCCCGAGTCGGGCTATCAGTACCTGCTC
GATTCCAATCTGGACTGGGGGCAGGATCTGCCCGCGGCCAGAGCGGCCCT
GGAGGAACTTTCCCCCGCAGACCGGGAACGTTGTCTGATCTGCTATTTTG
GCACCGCGTTGCCGGAATCGTATGGGATTAAAGCCTTCAATATGCGGGAG
CGGATGCCGACCAATCCTGAAGATTGGAAGTATCTTGTGATCTCGGCCAA
CTATCTGCAAGGTCTGTATTCCGGGAAAGACCCTTATCAGGATTTTCGTT
CGCTGATTCCCCTGAAGCGGGTCGGTTACTCCATGTTCCTGTTTGACCTG
CAGAGCCCCGAAGCCCGGCAGGCCCTCGAGACGGTGATTCAGGTCAGCAT
CGAAATGCGGAAAGAGTACGAGCAACGAGTCAAAGCACAATCGCAGGCAG
AGGAAGACGAGCCGGGGCAGCGCTGA
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