mRNA_M-pyrifera_M_contig86250.20096.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86250.20096.1
Unique NamemRNA_M-pyrifera_M_contig86250.20096.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A1Y2F7L1_PROLT (Pig-C n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F7L1_PROLT)

HSP 1 Score: 71.6 bits (174), Expect = 3.010e-12
Identity = 56/114 (49.12%), Postives = 71/114 (62.28%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLA--LHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAK 336
            +S NAA +A+V+LASRL      FALI+ A+E FALFPI R  +   S  A L LT  L  +    TLA  + T LAAL+++ V F+T   P+W   S  +YK EIHGPWDIAK
Sbjct:  231 LSTNAAIMASVVLASRLRESFSVFALILFAVEWFALFPIFRRFLRLTSFRASLALTVVL-VLGACVTLAWCVSTRLAALWISMVIFITFGCPLWL-ISLQKYKNEIHGPWDIAK 342          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: S7S0D1_GLOTA (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7S0D1_GLOTA)

HSP 1 Score: 69.3 bits (168), Expect = 1.430e-11
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIA 333
            +S+NAA  ++V+LASRLS  A  FAL+V +++ FALFPILR R++       + +TA L+  T    L L  ++A +  A   FVT  GP    +S  +YK EI GPWD+A
Sbjct:  176 LSMNAAISSSVVLASRLSDDASVFALMVFSVQVFALFPILRHRLQATPAAVRVVITALLAGSTILLALPLSIVVAVILCATFMFVTFIGPCVLFWSQ-KYKNEIRGPWDVA 285          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A7S0X999_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X999_9CHLO)

HSP 1 Score: 69.7 bits (169), Expect = 1.440e-11
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 1
Query:    4 SLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALH---TLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAK 336
            SL AA  AA LLASRL + +  FA +++AL  F LFP LR  +  AS  A L LTAA+ A T +A LAL     L+AA ++AAVA + +A P+W     + +K +I+GPWD AK
Sbjct:  205 SLGAAMFAAALLASRLPTTSAVFADMLLALVLFVLFPFLRRDVRRASTAAHLALTAAVHAATLAAVLALPGSGRLIAAGYVAAVAGIVLACPVWL-IRMMAFKEQINGPWDEAK 317          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A0G4H4M5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H4M5_9ALVE)

HSP 1 Score: 69.3 bits (168), Expect = 2.180e-11
Identity = 52/115 (45.22%), Postives = 66/115 (57.39%), Query Frame = 1
Query:    7 LNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTA----LLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAKV 339
            LNA   AAVLL SRL +PA+ FA    A+E FAL P +R  +   S  A    L P+   L+A+  S    +  LL  +FLA++ F+T  GP+W   S  RYK EI GPWDIA V
Sbjct:  255 LNAGMFAAVLLGSRLETPAEVFAFTCFAMEIFALSPQVRRYVRLLSKRAYVYGLTPVLILLAAVALSL---VSNLLVCVFLASMFFITFVGPLWLIHSQ-RYKNEIQGPWDIAHV 365          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A0C3S6P6_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S6P6_PHLGI)

HSP 1 Score: 68.2 bits (165), Expect = 4.010e-11
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGP---MWFQFSAIRYKREIHGPWDIA 333
            +S+NAA  A+V+LASRL      FAL++V++E FALFP+LR R++   P     LTA  S +  S T AL   +A L++A  +FVT+A P   +W Q    +YK EI G WD A
Sbjct:  179 LSVNAAISASVVLASRLVDDVSVFALMLVSIEAFALFPLLRRRLQIV-PVVFPTLTALASGLAVSLTAALSPSVACLYVAVFSFVTLAAPSLLVWAQ----QYKNEIRGTWDAA 287          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A4P9XJG1_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit C n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XJG1_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 4.040e-11
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1
Query:    4 SLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAK 336
            S NAA  A+VLLASRL +    FAL+ VA+E FALFPILR  +   S    + LT  L+ +  +    +   L  +++AA  FVT   P W+  S  +YK EIHGPWD A+
Sbjct:  178 STNAAIFASVLLASRLPTSTHVFALMSVAVEWFALFPILRRHLRRLSSHHSIALTCLLAIVCTAMYYYISITLMLIYVAACIFVTFVCP-WWLISIQKYKNEIHGPWDEAR 287          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A2G5BI98_COERN (GPI2-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BI98_COERN)

HSP 1 Score: 68.6 bits (166), Expect = 4.430e-11
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAK 336
            +SLNAA +A+VLLAS+L S    FA ++ ALE FALFPI R  ++  S  A +  T  L+ +  +  + +  ++A L +    F+T+  P+W  +   RYK EIHGPWD A+
Sbjct:  290 VSLNAAVLASVLLASQLDSNLSVFAFLLFALEWFALFPIYRRYLKRISAAASVATTVVLAFVATAMFMYISRVIAMLHVFGTLFITLGCPLWLIWVQ-RYKNEIHGPWDEAR 400          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A1Y1WN32_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WN32_9FUNG)

HSP 1 Score: 67.0 bits (162), Expect = 1.480e-10
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAK 336
            +SLNAA +A VLLASRL S    FA +  ALE FALFPI+R  ++  S  A + +T  L+ + +   L +   +A + +    F+T   P+W  +   RYK EIHGPWD A+
Sbjct:  263 VSLNAAVLAGVLLASRLDSNMCVFAFLSFALEWFALFPIMRRYLKRISAKASMIMTLVLALLAWVLFLDISQAVAMIHVLGTLFITFGCPLWLIWIQ-RYKNEIHGPWDEAR 373          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A7S1G7J0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7J0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.090e-10
Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHT--LLAALFLAAVAFVTVAGPMWFQFSAIRYKREIHGPWDIAKV 339
            +SLNAA  A+VLLASRLSS +Q FAL+ +++E FALFPI    +   S  A L  TA   A   +A L  HT  ++A ++L  V  +T+  P+    S   +KREI GPWDIA V
Sbjct:  203 LSLNAAMFASVLLASRLSSTSQVFALLGLSIELFALFPIASRAVRLRSEEAHLAFTAVFGAC--AAYLLFHTSAIIAWVYLGFVVVITLVAPL-LLISVQVHKREIQGPWDIAHV 314          
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Match: A0A165R201_EXIGL (Phosphatidylinositol N-acetylglucosaminyltransferase n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165R201_EXIGL)

HSP 1 Score: 65.1 bits (157), Expect = 5.200e-10
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 1
Query:    1 ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPTALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGP---MWFQFSAIRYKREIHGPWDIA 333
            +S+NAA  A+V+LASRL +    FAL++++++ FALFPILR RI+          T  ++  +  +  +L   +A+LF   + FVT  GP   MW Q    +YK EI GPWD+A
Sbjct:  178 LSMNAAISASVVLASRLPTNLSVFALMLLSIQLFALFPILRKRIQAVPAVLHFTFTVCIATASVWSMHSLSPFVASLFAGTLLFVTFGGPGLLMWAQ----QYKNEIRGPWDVA 287          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86250.20096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2F7L1_PROLT3.010e-1249.12Pig-C n=1 Tax=Protomyces lactucae-debilis TaxID=27... [more]
S7S0D1_GLOTA1.430e-1143.24Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A7S0X999_9CHLO1.440e-1147.37Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A0G4H4M5_9ALVE2.180e-1145.22Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0C3S6P6_PHLGI4.010e-1144.74Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A4P9XJG1_9FUNG4.040e-1144.14Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A2G5BI98_COERN4.430e-1141.07GPI2-domain-containing protein n=1 Tax=Coemansia r... [more]
A0A1Y1WN32_9FUNG1.480e-1041.96Phosphatidylinositol N-acetylglucosaminyltransfera... [more]
A0A7S1G7J0_9STRA3.090e-1046.09Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A165R201_EXIGL5.200e-1040.35Phosphatidylinositol N-acetylglucosaminyltransfera... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86250contigM-pyrifera_M_contig86250:2..364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score70.5
Seed ortholog evalue6.2e-10
Seed eggNOG ortholog104355.XP_007861126.1
Preferred nameGPI2
KEGG koko:K01266,ko:K03859
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categorysignal peptide
GOsGO:0000506,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0017176,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
EggNOG free text desc.Phosphatidylinositol N-acetylglucosaminyltransferase
EggNOG OGs2254Z@155619,39SXG@33154,3H19S@355688,3NZ4F@4751,3V19D@5204,KOG3059@1,KOG3059@2759
EC3.4.11.19
COG Functional cat.I
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons1
Model size363
Cds size363
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816772.8366065-CDS-M-pyrifera_M_contig86250:1..3641622816772.8366065-CDS-M-pyrifera_M_contig86250:1..364Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86250 2..364 +
1692278169.7769618-CDS-M-pyrifera_M_contig86250:1..3641692278169.7769618-CDS-M-pyrifera_M_contig86250:1..364Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86250 2..364 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86250.20096.1prot_M-pyrifera_M_contig86250.20096.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86250 2..364 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86250.20096.1

>prot_M-pyrifera_M_contig86250.20096.1 ID=prot_M-pyrifera_M_contig86250.20096.1|Name=mRNA_M-pyrifera_M_contig86250.20096.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
ISLNAACVAAVLLASRLSSPAQCFALIVVALECFALFPILRARIEHASPT
ALLPLTAALSAITFSATLALHTLLAALFLAAVAFVTVAGPMWFQFSAIRY
KREIHGPWDIAKVGHAKVVA*
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mRNA from alignment at M-pyrifera_M_contig86250:2..364+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86250.20096.1 ID=mRNA_M-pyrifera_M_contig86250.20096.1|Name=mRNA_M-pyrifera_M_contig86250.20096.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig86250:2..364+ (Macrocystis pyrifera P11B4 male)
ATCTCTCTCAACGCAGCCTGCGTCGCAGCCGTGCTCCTCGCCTCCCGACT CTCCTCGCCAGCGCAGTGCTTCGCCCTCATCGTCGTGGCCCTCGAGTGCT TTGCGCTCTTCCCCATCCTGCGCGCCAGAATCGAGCACGCCTCCCCGACC GCGCTCCTCCCACTCACCGCAGCGCTCTCCGCCATCACCTTCTCCGCTAC CCTCGCCCTCCACACGCTGCTCGCAGCGCTCTTCCTCGCGGCGGTCGCTT TCGTCACCGTCGCCGGACCAATGTGGTTCCAGTTCTCAGCGATTCGGTAC AAGAGGGAAATCCACGGACCCTGGGACATCGCAAAGGTAGGACACGCCAA AGTTGTTGCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86250:2..364+

>mRNA_M-pyrifera_M_contig86250.20096.1 ID=mRNA_M-pyrifera_M_contig86250.20096.1|Name=mRNA_M-pyrifera_M_contig86250.20096.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig86250:2..364+ (Macrocystis pyrifera P11B4 male)
ATCTCTCTCAACGCAGCCTGCGTCGCAGCCGTGCTCCTCGCCTCCCGACT
CTCCTCGCCAGCGCAGTGCTTCGCCCTCATCGTCGTGGCCCTCGAGTGCT
TTGCGCTCTTCCCCATCCTGCGCGCCAGAATCGAGCACGCCTCCCCGACC
GCGCTCCTCCCACTCACCGCAGCGCTCTCCGCCATCACCTTCTCCGCTAC
CCTCGCCCTCCACACGCTGCTCGCAGCGCTCTTCCTCGCGGCGGTCGCTT
TCGTCACCGTCGCCGGACCAATGTGGTTCCAGTTCTCAGCGATTCGGTAC
AAGAGGGAAATCCACGGACCCTGGGACATCGCAAAGGTAGGACACGCCAA
AGTTGTTGCTTGAATCTCTCTCAACGCAGCCTGCGTCGCAGCCGTGCTCC
TCGCCTCCCGACTCTCCTCGCCAGCGCAGTGCTTCGCCCTCATCGTCGTG
GCCCTCGAGTGCTTTGCGCTCTTCCCCATCCTGCGCGCCAGAATCGAGCA
CGCCTCCCCGACCGCGCTCCTCCCACTCACCGCAGCGCTCTCCGCCATCA
CCTTCTCCGCTACCCTCGCCCTCCACACGCTGCTCGCAGCGCTCTTCCTC
GCGGCGGTCGCTTTCGTCACCGTCGCCGGACCAATGTGGTTCCAGTTCTC
AGCGATTCGGTACAAGAGGGAAATCCACGGACCCTGGGACATCGCAAAGG
TAGGACACGCCAAAGTTGTTGCTTGA
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