mRNA_M-pyrifera_M_contig86112.20071.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A7V8V9Z1_9BACT (D-ser_dehydrat domain-containing protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V9Z1_9BACT) HSP 1 Score: 289 bits (740), Expect = 6.670e-93 Identity = 155/237 (65.40%), Postives = 187/237 (78.90%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQARDHFPVEQQPDARLGRLSEVSPADAKPLSPFQRTAIGASIGP 711 PHGKTTMAPQLF +QLEDG+QGIT AT QQVAVARH+G SKILLANQII RPAAEF+V QL Q D E++CLVD +ETVRLLADTAK QL RPIELLLEV I GGRTGVRELA ++VA+E+++HA LRLRG+EGFEG++SGS+ +ETE LVRQYLK+LCE+A+ C GL+++++PI+SAGGSAF DLV++ARD FP EQQP+ L R D+ FQ +G S P Sbjct: 74 PHGKTTMAPQLFAKQLEDGSQGITLATPQQVAVARHFGFSKILLANQIIGRPAAEFIVTQLKQDDQFELMCLVDSLETVRLLADTAKSCQLQRPIELLLEVGIAGGRTGVRELAKALEVATELRQHAPQLRLRGIEGFEGLISGSTVEETESLVRQYLKQLCEIANACGKQGLLNTDHPIISAGGSAFFDLVIEARDCFPFEQQPEILL-RSGCYLTHDSGIYKAFQEQMLGRSSDP 309
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A7V9A612_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V9A612_9BACT) HSP 1 Score: 215 bits (547), Expect = 6.510e-68 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA 342 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA Sbjct: 14 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA 127
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A354PC17_9PLAN (Amino acid deaminase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354PC17_9PLAN) HSP 1 Score: 196 bits (499), Expect = 8.840e-57 Identity = 110/209 (52.63%), Postives = 144/209 (68.90%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQARDHFPVEQQPDARL 627 PHGKTTM+PQLF QL DGA+GI+ ATV Q+A+AR +GV +ILLANQ+I A + + L Q D E+LCLVD E+VR LAD A+RL L RPIE+LLEV G R GVR+L+ + VA V + L+LRG+EGFEG + G++ +ETE + +YL L EVA C GL+D + +LSAGGSAF DLVVQ+ + +E +P+ L Sbjct: 75 PHGKTTMSPQLFALQLADGARGISLATVHQLAIARRFGVQRILLANQLIVPSAIDSVATLLQQDDGFELLCLVDSAESVRRLADAARRLSLRRPIEVLLEVGAAGARCGVRDLSSALSVARAVTQSGSGLQLRGVEGFEGTIGGTTLEETEAAISRYLAFLWEVAAKCCDEGLLDRKMMLLSAGGSAFFDLVVQSGNQHLLEPRPEVIL 283
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: UPI0013DBAB5A (amino acid deaminase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DBAB5A) HSP 1 Score: 194 bits (493), Expect = 6.710e-56 Identity = 108/209 (51.67%), Postives = 141/209 (67.46%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQARDHFPVEQQPDARL 627 PHGKTTM+PQLF QLEDGA+GIT AT Q+AVAR +GV ++LLANQ+I A +++ R+L + E+LCLVD +E+V +LA ++R L RPIE+LLEV GR GVR L QVA V+ L+LRG+EGFEGI++G S +ETE +R YL LC+VA T G ID + ++SAGGSAF DLVV+A + P+ L Sbjct: 74 PHGKTTMSPQLFALQLEDGARGITLATAHQLAVARRFGVHRVLLANQLIAPSAVDYIARELHIDEDFELLCLVDSVESVEILASASRRFGLNRPIEVLLEVGAARGRCGVRSLEDARQVAQAVERAGEGLQLRGVEGFEGIIAGGSIEETETAIRSYLDFLCQVATTGCNEGWIDPQSLLVSAGGSAFFDLVVEASERHGFATPPEVIL 282
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: UPI0019881235 (Amino acid deaminase n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI0019881235) HSP 1 Score: 177 bits (450), Expect = 1.570e-49 Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLV 576 PHGKTTMAPQLF QLEDGA GIT AT+QQV VAR +G S+ILLAN+++D A ++++ +L + S E LCLVD I V LA K+ L RP+ELLLE + GGRTG R LA + VA VK+H+ L LRG+EGFEGI++ ++ Q + VR++L L E+A C L + ++SAGGS F DLV Sbjct: 75 PHGKTTMAPQLFQMQLEDGAWGITLATMQQVQVARRFGCSRILLANELVDVRAIDYIIAELARDASFEFLCLVDSIAGVERLAAAVKQHGLSRPLELLLEGGLAGGRTGCRTLADAMDVARAVKQHSPSLALRGVEGFEGIIAEATPQASAARVREFLGFLLEIARRCAEENLFAAGKVVISAGGSEFFDLV 266
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A4R3VG72_9BURK (D-serine dehydratase n=1 Tax=Paracandidimonas soli TaxID=1917182 RepID=A0A4R3VG72_9BURK) HSP 1 Score: 169 bits (427), Expect = 3.980e-46 Identity = 89/194 (45.88%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQ 582 PHGKTTM+P+LF +QL DGA IT A V QV VARH+G+ +I LANQ++ R A E+++ L + C+ D +E VR+LAD A R+ RP+++L+E+ I G R+G R+ + VA + EH+ L LRG+EGFEGILS S E + V+ +L + EVA+ C L +LSAGGSAF D+V++ Sbjct: 76 PHGKTTMSPELFARQLNDGAWAITLANVHQVQVARHFGIRRIFLANQLVGRQAIEYILGTLRDDPDFDFYCVADSVEHVRMLADAASRIDAGRPLQVLVEIGIPGARSGCRDTESALAVARAIHEHSPLLSLRGVEGFEGILSHSDPGELAQRVKAFLSSMREVAEQCDAEDLYGDGTVLLSAGGSAFYDIVLE 269
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A2E8GSC3_9DELT (Alanine racemase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E8GSC3_9DELT) HSP 1 Score: 166 bits (421), Expect = 2.850e-45 Identity = 94/197 (47.72%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQARD 591 PHGKTTMAPQLF QQLEDGA GIT A V Q+ + R++GVS++L+ANQ++ ++ +L + LE+ CLVD + VR LA+ A L RP LLLE+ + GR+G R A + VA VK+ L LRG+EGFEG+L G +D ET+ V+++L+++ +VA+ C GL IL+AGGS F DLV Q D Sbjct: 74 PHGKTTMAPQLFQQQLEDGAWGITVANVPQLRMCRNWGVSRVLIANQVVGPQELRGMMTELREFPELEVFCLVDSVVNVRQLAEAADASGLERPALLLLELGVANGRSGCRTEAEALVVARAVKDATPRLHLRGVEGFEGLLKGRTDAETQ--VQEFLQRINQVAERCAAEGLFSEGPVILTAGGSDFYDLVAQHLD 268
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A1M3PLG2_9PROT (Alanine racemase n=1 Tax=Rhodospirillales bacterium 70-18 TaxID=1895826 RepID=A0A1M3PLG2_9PROT) HSP 1 Score: 165 bits (417), Expect = 1.010e-44 Identity = 94/198 (47.47%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQARDH 594 PHGKTTMAPQLF +Q+ DGA GIT AT QQ+ VAR +G +I+LANQ++ R A +++ ++ + L+ C+VD +E V LA A+ RP+++LLE + GGRTGVR+ A G+ VA VK A +L LRG+EGFEG+ SG+ E E VR +L L +A C GL + IL+AGGSAF D+V+ +H Sbjct: 74 PHGKTTMAPQLFERQMADGAWGITLATPQQIQVARSFGFQRIVLANQLVGRQAIRYVLEEIGRDPGLDFYCIVDSLENVAQLAGAARAAGAGRPLQVLLEGGMMGGRTGVRDQAQGLAVARAVKAAAPYLVLRGVEGFEGLTSGTR-AEAEAQVRGFLDLLVNLARACESEGLFGAGEVILTAGGSAFYDMVLARFNH 270
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: UPI00191A523F (amino acid deaminase n=1 Tax=Rhizobium sp. KVB221 TaxID=2801340 RepID=UPI00191A523F) HSP 1 Score: 162 bits (409), Expect = 1.630e-43 Identity = 82/192 (42.71%), Postives = 126/192 (65.62%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLV 576 PHGKTT++PQLF +QL+DGA GIT + + QV +ARH+GV +I+ ANQ++ + ++++ ++ +++ CLVD +E V LA A+R + RP+++L+E + RTG R L ++VA V H +L LRG+EGFEG++S +E +R++L L ++A C GL+ E ILSAGGSA+ DLV Sbjct: 74 PHGKTTLSPQLFRRQLDDGAWGITLSNIHQVKMARHFGVDRIVFANQLVGKAGMDYVLDEIAANPAVDFYCLVDSVENVEALAAAARRRKAGRPLQVLIEGGVVNRRTGCRTLEDAMRVARAVAAHKPYLSLRGVEGFEGVISSPDPEEAAASIRRFLAFLVDIALACEQEGLLADEEIILSAGGSAYFDLV 265
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Match: A0A504LCD6_9HYPH (Amino acid deaminase n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A504LCD6_9HYPH) HSP 1 Score: 161 bits (408), Expect = 2.290e-43 Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 1 PHGKTTMAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFLVRQLLQVDSLEILCLVDPIETVRLLADTAKRLQLPRPIELLLEVRITGGRTGVRELA*GVQVASEVKEHAGWLRLRGMEGFEGILSGSSDQETERLVRQYLKKLCEVADTCRL*GLIDSEYPILSAGGSAFLDLVVQ 582 PHGKTTM+PQLF QL DGA IT AT Q+ VAR +G +I+LANQ++ R A +++V +L + CLVD V +LA + L RP+ +L+E+ +GGRTG R +A + +A E++ G L L G+EGFEG++ S++ ET LV +L K+ E+A+ C L DS +LSAGGS+F D+V + Sbjct: 74 PHGKTTMSPQLFDIQLADGAWAITVATTHQLQVARQFGFKRIVLANQLVGRSAIDYVVHELATDPQFDFFCLVDDPSNVSVLAARVRETGLSRPLNVLVELGYSGGRTGCRTVAQALALAREIRATGGALALAGIEGFEGLMRASTNAETLSLVEAFLSKVVELAEVCAAEDLFDSATVLLSAGGSSFFDIVAK 267 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86112.20071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig86112.20071.1 >prot_M-pyrifera_M_contig86112.20071.1 ID=prot_M-pyrifera_M_contig86112.20071.1|Name=mRNA_M-pyrifera_M_contig86112.20071.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp MAPQLFTQQLEDGAQGITPATVQQVAVARHYGVSKILLANQIIDRPAAEFback to top mRNA from alignment at M-pyrifera_M_contig86112:3..792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig86112.20071.1 ID=mRNA_M-pyrifera_M_contig86112.20071.1|Name=mRNA_M-pyrifera_M_contig86112.20071.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=790bp|location=Sequence derived from alignment at M-pyrifera_M_contig86112:3..792+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig86112:3..792+ >mRNA_M-pyrifera_M_contig86112.20071.1 ID=mRNA_M-pyrifera_M_contig86112.20071.1|Name=mRNA_M-pyrifera_M_contig86112.20071.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig86112:3..792+ (Macrocystis pyrifera P11B4 male)back to top |