mRNA_M-pyrifera_M_contig86038.20048.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig86038.20048.1
Unique NamemRNA_M-pyrifera_M_contig86038.20048.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A397A976_9STRA (Coronin (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A976_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.550e-32
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIKAN+ FFAV+ + GGG+  V P +K GK     P + GHR  + DFDF+PF++H++A+ S D+TIK+W IPEGGLTE MTE +  L GHGRKVTL
Sbjct:   35 GEQNYIKANTKFFAVAIQAGGGAFAVVPYDKVGKFDSDYPLVGGHRGAIMDFDFNPFHEHLIASASDDTTIKIWGIPEGGLTETMTEPLVDLTGHGRKVTL 135
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A6G0W619_9STRA (Coronin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0W619_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.720e-31
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIKAN+ FFAV+ + GGG+  V P  K GK     P + GHR  + DFDF+PF++H++A+ S D+T+KVW IPEGGLTE MTE +  L GHGRKVTL
Sbjct:   34 GEQNYIKANTKFFAVAIQAGGGAFAVVPYEKVGKFDPDFPLVGGHRGAIMDFDFNPFHEHLIASASDDTTVKVWGIPEGGLTETMTEPLVDLTGHGRKVTL 134
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A024U4A2_9STRA (Coronin n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4A2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.550e-31
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIKAN+ FFAV+ + GGG+  V P +K GK     P + GHR  + DFDF+PF++H++A+ S D+TIKVW IPEGGL+E MTE +  L GHGRKVTL
Sbjct:   35 GEQNYIKANTKFFAVAIQAGGGAFAVVPYDKVGKFDSDFPLVGGHRGAIMDFDFNPFHEHLIASASDDTTIKVWGIPEGGLSETMTEPLVDLTGHGRKVTL 135
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A067BYT2_SAPPC (Coronin n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BYT2_SAPPC)

HSP 1 Score: 124 bits (310), Expect = 6.280e-31
Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIK N+ FFAV+ + GGG+  V P  K GK     P I GHR  + DFDF+PF++H++A+ S D+T+KVW IPEGGLTE MTE +  L GHGRKVTL
Sbjct:   34 GEQNYIKGNTKFFAVAIQAGGGAFAVVPYEKVGKFDPDFPLIGGHRGAIMDFDFNPFHEHLIASASDDTTLKVWGIPEGGLTETMTEPLVDLTGHGRKVTL 134
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: F0Y2I0_AURAN (Coronin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I0_AURAN)

HSP 1 Score: 122 bits (306), Expect = 2.000e-30
Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE  YIK N+ FFAV+ +GGGG   V P  K G+   G P + GH+  V DFDF+PF++HI+A+ S DSTIKVW IP  GLTE +TE +  L GHGRKVTL
Sbjct:   34 GEQQYIKGNTKFFAVALQGGGGPFAVVPYGKKGQFAPGTPVVAGHKSAVLDFDFNPFHEHIIASASEDSTIKVWGIPPDGLTETITEPLVDLHGHGRKVTL 134
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A7S1G673_9STRA (Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G673_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.420e-30
Identity = 55/100 (55.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVT 303
            G+H Y+K ++ FF+V+ RGGGG VLV P  K G++  GAP I GH   V+D D++PFN +++AT S DST KVW IP+GGLTEN++E +A L GHG+ VT
Sbjct:   52 GDHTYVKGSTKFFSVAVRGGGGPVLVLPFEKTGRVAPGAPVITGHHGNVFDTDWNPFNPNMVATVSDDSTCKVWGIPDGGLTENLSEPLADLRGHGKPVT 151
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A8K1C6N4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6N4_PYTOL)

HSP 1 Score: 121 bits (303), Expect = 6.500e-30
Identity = 56/99 (56.57%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKV 300
            GE NYIK NS FFAVS + GGG++ V P  K GK     P I GHR  + DFDF+PF++H++A+ S D+TIK+W IPEGGLTE   E +  L+GHGRKV
Sbjct:   34 GEQNYIKGNSKFFAVSIQAGGGAMAVVPYEKVGKFDPDFPLISGHRGAILDFDFNPFHEHLVASASDDTTIKIWGIPEGGLTETCVEPLVDLQGHGRKV 132
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: M4BYQ8_HYAAE (Coronin n=28 Tax=Peronosporaceae TaxID=4777 RepID=M4BYQ8_HYAAE)

HSP 1 Score: 119 bits (299), Expect = 2.390e-29
Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIK N+ FFAVS + GGG++ V P ++ GK     P I GHR  + DFDF+PF++H++A+ S D+T+K+W IPEGGLTE   + +  L GHGRKVTL
Sbjct:   34 GEQNYIKGNTKFFAVSIQAGGGAMAVVPYDRVGKFDPDFPLISGHRGAILDFDFNPFHEHLVASASDDTTVKIWGIPEGGLTETCVDPLVDLVGHGRKVTL 134
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BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: K3X418_GLOUD (Coronin n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X418_GLOUD)

HSP 1 Score: 118 bits (296), Expect = 6.220e-29
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRK 297
            GE NYIK N+ FFAVS + GGG++ V P  K GK     P I GHR  + DFDF+PF++H++A+ S D+TIK+W IPEGGLTE   E +  L+GHGRK
Sbjct:   34 GEQNYIKGNTKFFAVSIQAGGGAMAVVPYEKYGKFDPDFPLISGHRGAILDFDFNPFHEHLIASASDDTTIKIWGIPEGGLTETCVEPLVDLQGHGRK 131
[Close]
BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Match: A0A2D4C4E8_PYTIN (Coronin (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4E8_PYTIN)

HSP 1 Score: 118 bits (296), Expect = 6.220e-29
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 
Query:    4 GEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTVYDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKVTL 306
            GE NYIK N+ FFAV+ + GGG++ V P  K GK     P + GHR  + DFDF+PF++H++A+ S D+TIK+W IPEGGL+E     +  L+GHGRKVTL
Sbjct:   34 GEQNYIKGNTKFFAVAIQAGGGAMAVVPYEKVGKFDPDFPLVSGHRGAILDFDFNPFHEHLIASASDDTTIKIWGIPEGGLSETCVXPLVDLQGHGRKVTL 134
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86038.20048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397A976_9STRA1.550e-3257.43Coronin (Fragment) n=1 Tax=Aphanomyces astaci TaxI... [more]
A0A6G0W619_9STRA1.720e-3157.43Coronin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
A0A024U4A2_9STRA2.550e-3157.43Coronin n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
A0A067BYT2_SAPPC6.280e-3157.43Coronin n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
F0Y2I0_AURAN2.000e-3056.44Coronin n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
A0A7S1G673_9STRA2.420e-3055.00Coronin n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486... [more]
A0A8K1C6N4_PYTOL6.500e-3056.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BYQ8_HYAAE2.390e-2953.47Coronin n=28 Tax=Peronosporaceae TaxID=4777 RepID=... [more]
K3X418_GLOUD6.220e-2955.10Coronin n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X418... [more]
A0A2D4C4E8_PYTIN6.220e-2952.48Coronin (Fragment) n=1 Tax=Pythium insidiosum TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86038contigM-pyrifera_M_contig86038:218..604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.7
Seed ortholog evalue7.8e-27
Seed eggNOG ortholog157072.XP_008870867.1
Preferred nameCORO2A
KEGG koko:K13882,ko:K13886,ko:K13887
KEGG Pathwayko04145,ko05152,map04145,map05152
Hectar predicted targeting categoryother localisation
GOsGO:0000147,GO:0000278,GO:0000281,GO:0000910,GO:0001667,GO:0001725,GO:0001755,GO:0001772,GO:0001775,GO:0001776,GO:0001845,GO:0001891,GO:0001894,GO:0001906,GO:0001909,GO:0001932,GO:0001933,GO:0001952,GO:0001953,GO:0002228,GO:0002252,GO:0002260,GO:0002263,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002449,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003779,GO:0003785,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005826,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005886,GO:0005901,GO:0005903,GO:0005911,GO:0005937,GO:0005938,GO:0006469,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007033,GO:0007040,GO:0007049,GO:0007154,GO:0007155,GO:0007162,GO:0007165,GO:0007166,GO:0007275,GO:0007525,GO:0007527,GO:0008017,GO:0008022,GO:0008064,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008154,GO:0008284,GO:0008360,GO:0009267,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009620,GO:0009628,GO:0009719,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010324,GO:0010467,GO:0010522,GO:0010563,GO:0010605,GO:0010631,GO:0010632,GO:0010633,GO:0010638,GO:0010639,GO:0010721,GO:0010762,GO:0010769,GO:0010771,GO:0010810,GO:0010812,GO:0010941,GO:0010959,GO:0012505,GO:0012506,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014910,GO:0014912,GO:0015629,GO:0015631,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016328,GO:0016477,GO:0016482,GO:0016600,GO:0017016,GO:0017022,GO:0017048,GO:0017053,GO:0019220,GO:0019222,GO:0019899,GO:0022402,GO:0022407,GO:0022409,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030001,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030042,GO:0030054,GO:0030097,GO:0030098,GO:0030101,GO:0030139,GO:0030154,GO:0030155,GO:0030217,GO:0030334,GO:0030335,GO:0030336,GO:0030424,GO:0030427,GO:0030479,GO:0030587,GO:0030595,GO:0030659,GO:0030666,GO:0030674,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031152,GO:0031252,GO:0031267,GO:0031323,GO:0031324,GO:0031334,GO:0031338,GO:0031339,GO:0031344,GO:0031345,GO:0031346,GO:0031399,GO:0031400,GO:0031410,GO:0031529,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032036,GO:0032101,GO:0032102,GO:0032153,GO:0032155,GO:0032268,GO:0032269,GO:0032271,GO:0032273,GO:0032420,GO:0032421,GO:0032426,GO:0032432,GO:0032501,GO:0032502,GO:0032506,GO:0032535,GO:0032796,GO:0032879,GO:0032940,GO:0032944,GO:0032946,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033554,GO:0033673,GO:0034097,GO:0034315,GO:0034316,GO:0034613,GO:0034622,GO:0034762,GO:0034765,GO:0035556,GO:0035767,GO:0035838,GO:0036089,GO:0036119,GO:0036120,GO:0038179,GO:0038180,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042102,GO:0042110,GO:0042127,GO:0042129,GO:0042221,GO:0042267,GO:0042325,GO:0042326,GO:0042330,GO:0042493,GO:0042592,GO:0042594,GO:0042641,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043029,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0043269,GO:0043299,GO:0043320,GO:0043332,GO:0043519,GO:0043521,GO:0043523,GO:0043524,GO:0043542,GO:0043547,GO:0043548,GO:0043549,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044387,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044853,GO:0044877,GO:0045055,GO:0045087,GO:0045121,GO:0045184,GO:0045321,GO:0045335,GO:0045472,GO:0045595,GO:0045596,GO:0045785,GO:0045859,GO:0045936,GO:0046649,GO:0046677,GO:0046903,GO:0046907,GO:0046983,GO:0048365,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050670,GO:0050671,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050832,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050922,GO:0051015,GO:0051017,GO:0051020,GO:0051049,GO:0051051,GO:0051093,GO:0051094,GO:0051125,GO:0051126,GO:0051127,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051258,GO:0051261,GO:0051270,GO:0051271,GO:0051272,GO:0051279,GO:0051282,GO:0051286,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051666,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051893,GO:0051895,GO:0051924,GO:0060090,GO:0060249,GO:0060255,GO:0060284,GO:0060326,GO:0060341,GO:0060485,GO:0060491,GO:0060548,GO:0060627,GO:0061024,GO:0061061,GO:0061502,GO:0061572,GO:0061640,GO:0061645,GO:0061802,GO:0061836,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070528,GO:0070663,GO:0070665,GO:0070670,GO:0070727,GO:0070838,GO:0070848,GO:0070887,GO:0070925,GO:0070938,GO:0071310,GO:0071345,GO:0071353,GO:0071363,GO:0071495,GO:0071496,GO:0071671,GO:0071672,GO:0071704,GO:0071840,GO:0071933,GO:0071944,GO:0072511,GO:0080090,GO:0080171,GO:0090066,GO:0090109,GO:0090130,GO:0090132,GO:0090135,GO:0090382,GO:0090630,GO:0090702,GO:0097327,GO:0097435,GO:0097458,GO:0097517,GO:0097708,GO:0098542,GO:0098588,GO:0098589,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0098927,GO:0099024,GO:0099080,GO:0099081,GO:0099120,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1900024,GO:1900025,GO:1900027,GO:1901214,GO:1901215,GO:1901654,GO:1901700,GO:1901879,GO:1901880,GO:1901888,GO:1901889,GO:1902410,GO:1902463,GO:1902743,GO:1902744,GO:1902745,GO:1902903,GO:1902904,GO:1902905,GO:1903037,GO:1903039,GO:1903047,GO:1903169,GO:1903391,GO:1903392,GO:1903673,GO:1904062,GO:1904643,GO:1905861,GO:1990089,GO:1990090,GO:1990819,GO:2000145,GO:2000146,GO:2000147,GO:2000392,GO:2000393,GO:2000394,GO:2000601
EggNOG free text desc.actin filament binding
EggNOG OGsCOG1985@1,KOG0303@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Exons1
Model size387
Cds size387
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.7204204-CDS-M-pyrifera_M_contig86038:217..6041622816770.7204204-CDS-M-pyrifera_M_contig86038:217..604Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86038 218..604 -
1692278168.5447018-CDS-M-pyrifera_M_contig86038:217..6041692278168.5447018-CDS-M-pyrifera_M_contig86038:217..604Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig86038 218..604 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86038.20048.1prot_M-pyrifera_M_contig86038.20048.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig86038 218..604 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig86038.20048.1

>prot_M-pyrifera_M_contig86038.20048.1 ID=prot_M-pyrifera_M_contig86038.20048.1|Name=mRNA_M-pyrifera_M_contig86038.20048.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
MGEHNYIKANSLFFAVSTRGGGGSVLVHPMNKPGKIPMGAPTICGHRDTV
YDFDFSPFNQHILATGSGDSTIKVWEIPEGGLTENMTESVATLEGHGRKV
TLVQWHPTAENVLASASADFTVKVWNVED
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mRNA from alignment at M-pyrifera_M_contig86038:218..604-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig86038.20048.1 ID=mRNA_M-pyrifera_M_contig86038.20048.1|Name=mRNA_M-pyrifera_M_contig86038.20048.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig86038:218..604- (Macrocystis pyrifera P11B4 male)
ATGGGCGAGCACAACTACATCAAGGCGAACAGCTTGTTCTTCGCCGTGTC
CACGCGCGGCGGCGGCGGCAGCGTGCTGGTTCACCCGATGAACAAGCCGG
GCAAGATCCCCATGGGTGCGCCCACGATCTGCGGGCACCGGGACACGGTG
TACGACTTTGACTTCAGCCCGTTCAACCAGCACATCTTGGCGACGGGCAG
CGGCGACTCCACCATCAAGGTGTGGGAGATCCCGGAGGGTGGGCTGACGG
AGAACATGACGGAGTCTGTGGCCACCCTGGAGGGCCACGGCCGCAAGGTT
ACGCTCGTGCAGTGGCACCCAACTGCTGAGAACGTGCTGGCCTCTGCCTC
TGCCGACTTCACCGTCAAGGTGTGGAACGTGGAGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig86038:218..604-

>mRNA_M-pyrifera_M_contig86038.20048.1 ID=mRNA_M-pyrifera_M_contig86038.20048.1|Name=mRNA_M-pyrifera_M_contig86038.20048.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig86038:218..604- (Macrocystis pyrifera P11B4 male)
ATGGGCGAGCACAACTACATCAAGGCGAACAGCTTGTTCTTCGCCGTGTC
CACGCGCGGCGGCGGCGGCAGCGTGCTGGTTCACCCGATGAACAAGCCGG
GCAAGATCCCCATGGGTGCGCCCACGATCTGCGGGCACCGGGACACGGTG
TACGACTTTGACTTCAGCCCGTTCAACCAGCACATCTTGGCGACGGGCAG
CGGCGACTCCACCATCAAGGTGTGGGAGATCCCGGAGGGTGGGCTGACGG
AGAACATGACGGAGTCTGTGGCCACCCTGGAGGGCCACGGCCGCAAGGTT
ACGCTCGTGCAGTGGCACCCAACTGCTGAGAACGTGCTGGCCTCTGCCTC
TGCCGACTTCACCGTCAAGGTGTGGAACGTGGAGGACATGGGCGAGCACA
ACTACATCAAGGCGAACAGCTTGTTCTTCGCCGTGTCCACGCGCGGCGGC
GGCGGCAGCGTGCTGGTTCACCCGATGAACAAGCCGGGCAAGATCCCCAT
GGGTGCGCCCACGATCTGCGGGCACCGGGACACGGTGTACGACTTTGACT
TCAGCCCGTTCAACCAGCACATCTTGGCGACGGGCAGCGGCGACTCCACC
ATCAAGGTGTGGGAGATCCCGGAGGGTGGGCTGACGGAGAACATGACGGA
GTCTGTGGCCACCCTGGAGGGCCACGGCCGCAAGGTTACGCTCGTGCAGT
GGCACCCAACTGCTGAGAACGTGCTGGCCTCTGCCTCTGCCGACTTCACC
GTCAAGGTGTGGAACGTGGAGGAC
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