mRNA_M-pyrifera_M_contig85986.20040.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85986.20040.1
Unique NamemRNA_M-pyrifera_M_contig85986.20040.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: K6Z211_9ALTE (Cytosine-specific methyltransferase n=2 Tax=Paraglaciecola TaxID=1621534 RepID=K6Z211_9ALTE)

HSP 1 Score: 330 bits (847), Expect = 3.780e-107
Identity = 174/288 (60.42%), Postives = 218/288 (75.69%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQ-GLGGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKGVIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYDR---HSILAHQVRHRDEKPVVSEKEATDE 852
            E+FAYN LG++L   G+   + V+W+S+++ R+N EARL ENP NA+G+     DL  +E+  E L G+LL+GSILDLN ++ +     ALR+ L +GEVDL+SGGPPCQSFSMAG+RQ SNQRNSLPWAFAEFVRQ+ PKMALLENV+GILRAFNIDG+KY AWYEVAKAFA+EGYVPLCLHVNAKYAGAAQNRPRFIMLAFR ++  +I  N+ D  L +ALE S  F+ LV      L YGHL++HDVENGS +Y+     SI+A  +R    K +++ KEA D+
Sbjct:   36 ETFAYNHLGLNLEDNGIRDDDPVYWISSEHHRDNSEARLKENPYNAAGLKNRESDLVGLENHPEKLRGSLLIGSILDLNVLLKKTKFKKALREGLGDGEVDLVSGGPPCQSFSMAGMRQHSNQRNSLPWAFAEFVRQVKPKMALLENVTGILRAFNIDGEKYYAWYEVAKAFALEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRKNVFAQILKNNTDNALSEALENSHQFFKLVSKEGGELEYGHLKYHDVENGSPIYNSTIFESIVA--MRSATNK-LITTKEAIDD 320          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI001B3748E6 (DNA (cytosine-5-)-methyltransferase n=1 Tax=Pseudoalteromonas luteoviolacea TaxID=43657 RepID=UPI001B3748E6)

HSP 1 Score: 278 bits (710), Expect = 6.870e-87
Identity = 149/281 (53.02%), Postives = 196/281 (69.75%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGI-DGHICDLDKIEDFGEALNGALLVGSILDLNRII--ARKGVIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYDRHSILAHQVRHRDEKPVVSE 834
            ESFAYN L  DL+       NV W+S+ + RN+ ++RL ENP +A G+ + H  DL  I+   E LN +LLVGSI+D+N+I+      +++  R  L  GEVDL+SGGPPCQSFS+AG+R  ++ RN LPW FA+FV ++ PKM +LENVSGILRAF IDG++Y AW+EVAKAFA  GY+PLCLHVNAKYAG AQNRPRFI+LAFR DIA  I +N  D   K AL++S +FY  + +G E LPYG L+  D+E  SGL++  SIL+    +  + P V +
Sbjct:   36 ESFAYNHLNTDLTSDSDPA-NVFWVSSMHDRNSIKSRLRENPYDAIGLQEQHFSDLLDIKPTNEQLNRSLLVGSIVDVNKILDAGNTSLLEQFRTALGQGEVDLVSGGPPCQSFSLAGMRDHTHHRNELPWEFAKFVEKIKPKMTMLENVSGILRAFKIDGEQYYAWFEVAKAFAKVGYIPLCLHVNAKYAGVAQNRPRFILLAFREDIAL-ILSNKLDSEFKSALKKSIDFYQSIKSGEE-LPYGSLKCFDIEKDSGLFED-SILSSLYSNDKKLPTVKD 312          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI001CD5DAE2 (DNA cytosine methyltransferase n=1 Tax=Microbulbifer agarilyticus TaxID=260552 RepID=UPI001CD5DAE2)

HSP 1 Score: 248 bits (633), Expect = 3.080e-75
Identity = 142/291 (48.80%), Postives = 191/291 (65.64%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGID-GHICDL-DKIEDFGEALNGALLVGSILDLNRIIARKGVID-ALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDAN-SQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFH---DVENGSGLYDRHSILAHQVRHRDEKPVVSEKEATDE 852
            E+FAYN LG DL +     ENV+W+S+ + R+    RL ENP+ A+G+   H  DL +K+ +  E L  +LLVGSI+D+N ++  K     AL+  L  G+VDL+SGGPPCQSFS+AGLR  ++ RN LPW FA+FV  + PK+ALLENVSGILR F I+G+K+ AWYEVAKAFA  GY+PLCLHVNAKY+GAAQNRPRFIM+A R D+   I  + ++D  ++K  E S   +  V NG+    YG +Q     D+E    ++   S+L   + H  E   VS K+A D+
Sbjct:   36 ETFAYNHLGADL-ETQSNCENVYWISSQFERDKISLRLRENPVLATGLSPDHTSDLKNKLPN--EKLKRSLLVGSIVDINTLLEEKRWFRIALKSGLGTGDVDLVSGGPPCQSFSLAGLRDHTHHRNQLPWEFAKFVENVKPKIALLENVSGILRPFKIEGEKFYAWYEVAKAFAKVGYIPLCLHVNAKYSGAAQNRPRFIMIAIRKDVLSSIKKSIAKDDPIRKIFEPSELLFKAVRNGDP--EYGAVQDFKCWDIEKDKSIFSN-SLLKSLLSHPTEDTFVSVKDAIDD 320          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: A0A7S6W0W9_9GAMM (Cytosine-specific methyltransferase n=1 Tax=Acinetobacter sp. YH12138 TaxID=2601122 RepID=A0A7S6W0W9_9GAMM)

HSP 1 Score: 237 bits (604), Expect = 3.640e-71
Identity = 130/261 (49.81%), Postives = 173/261 (66.28%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGI-DGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKG-VIDALRKK-LPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYD 774
            E+FAYN    +L  G G  ++  W+++++ +     RL ENP     I +G   D+D+  +    LN  LLVGSI+DLN ++ +   ++  ++   LPNG +DL+SGGPPCQSFSMAGLRQ  N+RN+LPW FA+FV    PK  LLENV+GILRAFN +  ++ AWYEVAKAFA   YVPLCLHVNAKYAG AQNRPRFI+L  R D+ KKI+ N      K+A   SFNF++ V   N  L YGHL ++DV+N +  ++
Sbjct:   36 ETFAYNFFNENLD-GKGYPQHTLWINSNFSKEEINKRLRENPKTYPTIAEGGFSDIDESSN----LNKKLLVGSIVDLNNLLEQSPQLLQQIQDNGLPNG-LDLVSGGPPCQSFSMAGLRQLGNERNTLPWEFAKFVDHTKPKFVLLENVTGILRAFNTEKGQFYAWYEVAKAFAGINYVPLCLHVNAKYAGVAQNRPRFILLGVREDVYKKIE-NRLSSVEKEAFLRSFNFFEKV-KANPELEYGHLNYYDVDNDTAFFE 288          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI0014906A95 (DNA (cytosine-5-)-methyltransferase n=1 Tax=Acinetobacter sp. Ac_3412 TaxID=1848935 RepID=UPI0014906A95)

HSP 1 Score: 232 bits (591), Expect = 3.100e-69
Identity = 124/259 (47.88%), Postives = 172/259 (66.41%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGI-DGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKG-VIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLY 771
            E+F+YN     L +G    E+  W+++++P+     RL ENP     I +G   D+++  +    LN  LLVGSI++LN ++ +   ++D ++ K  +  +DL+SGGPPCQSFSMAGLRQ  N+RN+LPW FA+FV    PK  LLENV+GILRAFN D  ++ AWYEVAKAFA   Y+PLCLHVNAKYAG AQNRPRFI+L  R D+ +KI  N  + T K+A ++SF F++ V    E L YG+L ++DV+N    +
Sbjct:   36 ETFSYNFFNEKL-EGNSAPEHALWINSNFPKEEISKRLRENPKTYPPIVEGGYSDVNRNTE----LNKKLLVGSIIELNNLLEQSPELLDQIQDKGLSNGLDLVSGGPPCQSFSMAGLRQLGNERNTLPWEFAKFVEHTQPKFVLLENVTGILRAFNTDKGQFFAWYEVAKAFAGINYIPLCLHVNAKYAGVAQNRPRFILLGIREDVYQKIK-NRLNSTEKEAFDKSFKFFEKVKADPE-LGYGYLDYYDVDNNHDFF 287          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI00158048A1 (DNA cytosine methyltransferase n=1 Tax=Acinetobacter seifertii TaxID=1530123 RepID=UPI00158048A1)

HSP 1 Score: 223 bits (567), Expect = 4.820e-68
Identity = 123/265 (46.42%), Postives = 168/265 (63.40%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKG--VIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYDRHSIL 789
            E+FAYN    +L +       V WLS+ +   + ++RL E+P     ++    DLD   D    LN  L+VG+I+ LN+ + +    V D        G +DL+SGGPPCQSFSMAGLRQ SN RN+LPW FA+FV+   PK+ALLENV+GILRAF+++GKK+ AW+EVAKAFA   Y+PLCLH+NAKYAG AQNRPRFI++  RHDI  ++  +S +   K+   ++ +F D +  G + + YG L + DVE     YD H  L
Sbjct:   36 ETFAYNFFNENLEKSNNKKTQVKWLSSKFKNEDIKSRLREDPRTFPELNEGQSDLDDYSD----LNEKLIVGNIVQLNQWLEKHPFQVNDLSMAYGQKGGLDLVSGGPPCQSFSMAGLRQFSNNRNTLPWEFAKFVQMTQPKIALLENVTGILRAFDVEGKKFYAWFEVAKAFAQINYIPLCLHINAKYAGVAQNRPRFILVGIRHDIFDQV-YSSFNKHEKELYSQAISFVDNLKKGLQ-VEYGTLSYFDVE-----YDEHLTL 289          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: A0A7Z1WKC0_ACIBA (Cytosine-specific methyltransferase n=28 Tax=Acinetobacter TaxID=469 RepID=A0A7Z1WKC0_ACIBA)

HSP 1 Score: 228 bits (581), Expect = 1.060e-67
Identity = 123/265 (46.42%), Postives = 170/265 (64.15%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKG--VIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYDRHSIL 789
            E+FAYN    DL +       V WLS+ +   + ++RL E+P     ++    DLD   D    L+G L++G+I+ LN+ + +    V D        G +DL+SGGPPCQSFSMAGLRQ SN RN+LPW FA+FV+   PK+ALLENV+GILRAF+++GKK+ AW+EVAKAFA   Y+PLCLH+NAKYAG AQNRPRFI++  RHD+  ++ ++  +   KK   ++ +F D +  G + + YG L + DVE     YD H IL
Sbjct:   36 ETFAYNFFNEDLEKLNNKKSKVKWLSSKFTNEDIKSRLREDPRTFPELNEGQSDLDDHSD----LSGKLIIGNIVQLNKWLEKHPFQVNDLSMAYGQKGGLDLVSGGPPCQSFSMAGLRQFSNNRNTLPWEFAKFVQMTQPKIALLENVTGILRAFDVEGKKFYAWFEVAKAFAQINYIPLCLHINAKYAGVAQNRPRFILVGIRHDVFDQVYSSFNEYE-KKLYSQAISFVDNLKKGLQ-VEYGTLSYFDVE-----YDEHLIL 289          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: N9E9W4_ACIBZ (Cytosine-specific methyltransferase n=3 Tax=Acinetobacter TaxID=469 RepID=N9E9W4_ACIBZ)

HSP 1 Score: 224 bits (570), Expect = 4.820e-66
Identity = 128/267 (47.94%), Postives = 166/267 (62.17%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGE--ALNGALLVGSILDLNRIIAR--KGVIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSGLYDRHSIL 789
            E+FAYN    +L +       V WLS++Y + N +ARL E+P     +       +   DF E   LNG L+VG+I+ LN+ +    K   +        G +DL+SGGPPCQSFSMAGLRQ +N RN+LPW FA+FV+   PK+ALLENV+GILRAF+IDGKKY AW+EVAKAFA   Y+PLCLH+NAKYAG AQNRPRFI +  RHD+   I     + T KK  ++S NF + +  G + + YG L + DV      YD H  L
Sbjct:   36 ETFAYNFFNENLEESCP-ESRVIWLSSNYDKENRKARLREDPRKFPELG------ENKSDFSEDTKLNGKLVVGNIVQLNQWLEENPKQANELRNAYGREGGLDLVSGGPPCQSFSMAGLRQFNNTRNTLPWEFAKFVQTTQPKIALLENVTGILRAFDIDGKKYYAWFEVAKAFAQINYIPLCLHINAKYAGVAQNRPRFIFIGVRHDVFDNIYLKLNE-TEKKLYKQSINFANDLKKGFD-VEYGALSYFDV-----AYDEHQEL 288          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI001FF5B41A (DNA (cytosine-5-)-methyltransferase n=3 Tax=Marinobacter TaxID=2742 RepID=UPI001FF5B41A)

HSP 1 Score: 224 bits (570), Expect = 7.660e-66
Identity = 132/280 (47.14%), Postives = 176/280 (62.86%), Query Frame = 1
Query:    1 ESFAYNILGVDL------SQGLGGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGEALNGALLVGSILDLNRII-ARKGVIDALRKKLPNGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNIDGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHDVENGSG--LYDRHSILAHQVRHRD 813
            E+FAYN L  +L       +G G  +   WLS+ +P++N   RL ENP           D++   D    L+GAL+VGSI++LNR + A     DAL+     G +DL+SGGPPCQSFS+AGLRQ++NQRNSLPW  A+FV    PK ALLENV+GILRAF  +G+++ AW+EVAKAFAV GYVPLCLHVNAK AG AQNRPRFIMLA R DI ++++     +  +  L  S  FY  +  G + + +G + + D +      LY++ S L   V +RD
Sbjct:   36 ETFAYNFLDENLRAMADGEEGFGLPKRTKWLSSQFPKSNLHNRLRENPHEFPPYPEGESDINGPAD----LDGALVVGSIVELNRFLEAAPERRDALQSSFGRGGLDLVSGGPPCQSFSLAGLRQRTNQRNSLPWEMAKFVELTQPKFALLENVTGILRAFKEEGQEFHAWFEVAKAFAVVGYVPLCLHVNAKLAGVAQNRPRFIMLATRADIYEELEPTFSAIERELVLP-SHQFYLNITQG-QPVAFGDISYFDADKPQHHELYEQ-SFLRPLVAYRD 308          
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Match: UPI0011D66F00 (DNA cytosine methyltransferase n=3 Tax=Vibrio cholerae TaxID=666 RepID=UPI0011D66F00)

HSP 1 Score: 223 bits (568), Expect = 8.910e-66
Identity = 128/258 (49.61%), Postives = 160/258 (62.02%), Query Frame = 1
Query:    1 ESFAYNILGVDLSQGL---GGVENVHWLSTDYPRNNHEARLNENPLNASGIDGHICDLDKIEDFGEALNGALLVGSILDLNRIIARKGVIDALRKKLP-----NGEVDLISGGPPCQSFSMAGLRQQSNQRNSLPWAFAEFVRQLTPKMALLENVSGILRAFNI-DGKKY*AWYEVAKAFAVEGYVPLCLHVNAKYAGAAQNRPRFIMLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFHD 747
            E+FAYN LG DL +     G  + V W+ +D+   +   RL ENP N   I G   DLD I    E L G LLVGSI+DLN  + R     +L K L       G +DL+SGGPPCQSFSMAG R++ N++N+LPW FA FV  + PK+ LLENV+GILRAF + DG K+ AWYEV+K FA  GYVPLCLHVNA++ G  QNRPRFIM+A R D       NS  +  KK  EES NF+ L     + +P+G L + D
Sbjct:   36 ETFAYNFLGEDLEEKATQNGIPQKVRWIKSDFQ--SLRERLRENPFN---ISGKYSDLDDIS-CNEDLRGNLLVGSIVDLNNTLQRS---PSLAKALACGFQSGGSLDLVSGGPPCQSFSMAGKREKDNEKNALPWEFASFVNIVKPKIVLLENVTGILRAFQVEDGSKFHAWYEVSKVFASIGYVPLCLHVNARHVGVPQNRPRFIMIAVRQDTLTTFLENSPMMD-KKVWEESLNFFQLTTKDVDSVPFGILSYLD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85986.20040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K6Z211_9ALTE3.780e-10760.42Cytosine-specific methyltransferase n=2 Tax=Paragl... [more]
UPI001B3748E66.870e-8753.02DNA (cytosine-5-)-methyltransferase n=1 Tax=Pseudo... [more]
UPI001CD5DAE23.080e-7548.80DNA cytosine methyltransferase n=1 Tax=Microbulbif... [more]
A0A7S6W0W9_9GAMM3.640e-7149.81Cytosine-specific methyltransferase n=1 Tax=Acinet... [more]
UPI0014906A953.100e-6947.88DNA (cytosine-5-)-methyltransferase n=1 Tax=Acinet... [more]
UPI00158048A14.820e-6846.42DNA cytosine methyltransferase n=1 Tax=Acinetobact... [more]
A0A7Z1WKC0_ACIBA1.060e-6746.42Cytosine-specific methyltransferase n=28 Tax=Acine... [more]
N9E9W4_ACIBZ4.820e-6647.94Cytosine-specific methyltransferase n=3 Tax=Acinet... [more]
UPI001FF5B41A7.660e-6647.14DNA (cytosine-5-)-methyltransferase n=3 Tax=Marino... [more]
UPI0011D66F008.910e-6649.61DNA cytosine methyltransferase n=3 Tax=Vibrio chol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85986contigM-pyrifera_M_contig85986:3..854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score60.1
Seed ortholog evalue5.9e-07
Seed eggNOG ortholog493475.GARC_0514
Preferred namedcm
KEGG rclassRC00003,RC00332
KEGG koko:K00558
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
Hectar predicted targeting categoryother localisation
EggNOG free text desc.C-5 cytosine-specific DNA methylase
EggNOG OGs1MV9H@1224,1S18E@1236,46B58@72275,COG0270@1,COG0270@2
EC2.1.1.37
COG Functional cat.L
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036
Exons1
Model size852
Cds size258
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.2326267-UTR-M-pyrifera_M_contig85986:2..5961622816770.2326267-UTR-M-pyrifera_M_contig85986:2..596Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85986 3..596 +
1692278168.2443478-UTR-M-pyrifera_M_contig85986:2..5961692278168.2443478-UTR-M-pyrifera_M_contig85986:2..596Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85986 3..596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.2441971-CDS-M-pyrifera_M_contig85986:596..8541622816770.2441971-CDS-M-pyrifera_M_contig85986:596..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85986 597..854 +
1692278168.2672527-CDS-M-pyrifera_M_contig85986:596..8541692278168.2672527-CDS-M-pyrifera_M_contig85986:596..854Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85986 597..854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85986.20040.1prot_M-pyrifera_M_contig85986.20040.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85986 597..854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85986.20040.1

>prot_M-pyrifera_M_contig85986.20040.1 ID=prot_M-pyrifera_M_contig85986.20040.1|Name=mRNA_M-pyrifera_M_contig85986.20040.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
MLAFRHDIAKKIDANSQDLTLKKALEESFNFYDLVHNGNEGLPYGHLQFH
DVENGSGLYDRHSILAHQVRHRDEKPVVSEKEATDE
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mRNA from alignment at M-pyrifera_M_contig85986:3..854+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85986.20040.1 ID=mRNA_M-pyrifera_M_contig85986.20040.1|Name=mRNA_M-pyrifera_M_contig85986.20040.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig85986:3..854+ (Macrocystis pyrifera P11B4 male)
GAATCCTTTGCCTACAACATTTTGGGTGTTGATCTAAGCCAGGGCTTAGG AGGCGTCGAGAATGTCCATTGGCTAAGTACCGACTATCCACGCAACAACC ACGAAGCCCGGCTGAACGAAAACCCCCTCAATGCGTCAGGCATTGACGGT CATATATGTGACTTAGATAAAATCGAGGACTTCGGCGAAGCACTAAACGG AGCGCTGCTAGTCGGTAGTATTCTAGATCTTAATCGCATCATCGCAAGGA AGGGAGTTATCGATGCGTTGAGGAAGAAACTACCAAATGGCGAGGTCGAC CTTATCTCGGGAGGACCTCCATGCCAAAGCTTTAGCATGGCAGGCTTGCG GCAACAATCTAACCAGCGAAACTCCCTGCCTTGGGCGTTTGCGGAGTTTG TGCGTCAGCTAACGCCCAAAATGGCACTACTAGAAAATGTGTCAGGAATC TTGCGGGCATTTAATATAGACGGAAAGAAGTACTAGGCCTGGTATGAAGT AGCTAAGGCTTTTGCTGTTGAAGGATATGTGCCGTTATGCCTCCACGTCA ACGCAAAGTACGCAGGAGCTGCGCAAAACAGACCCCGTTTCATAATGCTT GCTTTTCGGCACGACATAGCTAAAAAAATAGACGCTAACTCGCAAGATCT CACCCTTAAAAAAGCGCTTGAAGAGTCCTTTAACTTCTACGACCTCGTCC ATAATGGGAATGAAGGCCTGCCCTATGGCCACCTACAATTCCATGACGTA GAAAATGGCTCTGGTCTGTACGACAGGCATTCAATCCTCGCTCATCAAGT AAGGCACCGAGACGAGAAACCAGTAGTAAGCGAGAAAGAAGCCACTGATG AG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85986:3..854+

>mRNA_M-pyrifera_M_contig85986.20040.1 ID=mRNA_M-pyrifera_M_contig85986.20040.1|Name=mRNA_M-pyrifera_M_contig85986.20040.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig85986:3..854+ (Macrocystis pyrifera P11B4 male)
ATGCTTGCTTTTCGGCACGACATAGCTAAAAAAATAGACGCTAACTCGCA
AGATCTCACCCTTAAAAAAGCGCTTGAAGAGTCCTTTAACTTCTACGACC
TCGTCCATAATGGGAATGAAGGCCTGCCCTATGGCCACCTACAATTCCAT
GACGTAGAAAATGGCTCTGGTCTGTACGACAGGCATTCAATCCTCGCTCA
TCAAGTAAGGCACCGAGACGAGAAACCAGTAGTAAGCGAGAAAGAAGCCA
CTGATGAGATGCTTGCTTTTCGGCACGACATAGCTAAAAAAATAGACGCT
AACTCGCAAGATCTCACCCTTAAAAAAGCGCTTGAAGAGTCCTTTAACTT
CTACGACCTCGTCCATAATGGGAATGAAGGCCTGCCCTATGGCCACCTAC
AATTCCATGACGTAGAAAATGGCTCTGGTCTGTACGACAGGCATTCAATC
CTCGCTCATCAAGTAAGGCACCGAGACGAGAAACCAGTAGTAAGCGAGAA
AGAAGCCACTGATGAG
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