mRNA_M-pyrifera_M_contig85982.20038.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85982.20038.1
Unique NamemRNA_M-pyrifera_M_contig85982.20038.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7Y2IHY5_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHY5_9ACTN)

HSP 1 Score: 382 bits (980), Expect = 3.930e-124
Identity = 197/286 (68.88%), Postives = 227/286 (79.37%), Query Frame = 1
Query:    1 DEDASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSG------GAPGD----GGATIPW--GTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCLG 822
            DE A    S   A A+ G++     H KP  VV    WF++G      GA GD    GG T+ +  GT+ DGQS++ML VVTFIS LVH+FST+YV GDRRY HY+AFLSLFTASMLF V+SA+T+Q+IVGWELVGVCSFALIGHWWED DNS+AALKAFLTNRVGDIGLL+GMI+LFF AG TFDI+ +NHAAV G +   T+ VASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+GRLYPVFW+GL I GSS N+LA +G +T +G
Sbjct:  153 DEYALTDASEIAATAEEGEEGGGGEHIKPAAVVNCLDWFETGSFGSDIGASGDEAAQGGRTLKFSIGTIADGQSIMMLFVVTFISLLVHVFSTEYVKGDRRYVHYYAFLSLFTASMLFMVLSATTLQLIVGWELVGVCSFALIGHWWEDQDNSNAALKAFLTNRVGDIGLLIGMIVLFFGAGQTFDIMTINHAAVTGGLSQTTMTVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVGRLYPVFWNGLMIPGSSFNILAFVGALTVVG 438          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A847EPL9_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Propioniciclava sp. TaxID=2038686 RepID=A0A847EPL9_9ACTN)

HSP 1 Score: 364 bits (935), Expect = 1.430e-118
Identity = 185/247 (74.90%), Postives = 208/247 (84.21%), Query Frame = 1
Query:   79 AKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            A   PVV   TWF SG     G  TI  GT+VDGQSV+MLVVVT IS LVHIFSTDYV GDRRYTHYFAFLSLFTASMLF+V++ +T+QMIVGWELVGVCSFALIGHWWE+  NSDAALKAFLTNRVGD+GLL+GMIIL+FAA  +F +L++N  A +G IG G LL ASLCL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+ RLYPVF++GL ISGSS+N LA +G +T L
Sbjct:  100 AATRPVVNCATWFDSG----QGSVTI--GTMVDGQSVMMLVVVTLISLLVHIFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLAENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDVGLLIGMIILYFAADRSFSVLDINVLAASGEIGRGLLLAASLCLIAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVARLYPVFFEGLSISGSSINALALVGAVTAL 340          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A6I3GIP1_9ACTN (NADH-quinone oxidoreductase subunit L n=11 Tax=root TaxID=1 RepID=A0A6I3GIP1_9ACTN)

HSP 1 Score: 364 bits (934), Expect = 8.370e-118
Identity = 188/270 (69.63%), Postives = 218/270 (80.74%), Query Frame = 1
Query:   10 ASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            ++AP + A ++    +   HE  A   PVV    WF++G        TI  GTLVDGQSVL+L+VVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S +T+QMIVGWELVGVCSFALIGHWWE+  NSDAALKAFLTNRVGDIGLLVG+I+L+FAAG +F IL+LN  A  G I H  LL+ SLCL+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG+YM+ RLYPVF++GL ISGSS+N L+ +G IT L
Sbjct:  131 SAAPAAPAASEPAAEEKGGHEEVAT-RPVVSCVNWFENGDQ------TISIGTLVDGQSVLLLIVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGVIVLYFAAGKSFSILDLNILANEGGISHNLLLIGSLCLITAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVYMVARLYPVFFEGLSISGSSVNALSMIGAITAL 393          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A6J7RG52_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7RG52_9ZZZZ)

HSP 1 Score: 358 bits (920), Expect = 1.660e-117
Identity = 180/242 (74.38%), Postives = 205/242 (84.71%), Query Frame = 1
Query:   94 VVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            +V    WF++G        TI  GTLVDGQSVL+L+VVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S +T+QMIVGWELVGVCSFALIGHWWE+  NSDAALKAFLTNRVGDIGLLVG+I+L+FAAG +F IL+LN  A  G I H  LL+ SLCL+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG+YM+ RLYPVF++GL ISGSS+N L+ +G IT L
Sbjct:    1 MVSCVNWFENGDQ------TISIGTLVDGQSVLLLIVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSENTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGVIVLYFAAGKSFSILDLNILANEGGISHNLLLIGSLCLITAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVYMVARLYPVFFEGLSISGSSVNALSMIGAITAL 236          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7X7D6A0_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D6A0_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 2.700e-117
Identity = 190/270 (70.37%), Postives = 215/270 (79.63%), Query Frame = 1
Query:   10 ASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            A+APGS +   A     AE E H +  PVV   TWF +G         +  GT++DG S LMLVVVT IS LVH+FSTDYV+GDRRYTHYFAFLSLFTASMLFYVVS+ST+QMIVGWELVG+CSFALIGHWWE+  NSDAALKAFL NRVGDIGLL GMI+LFFAAG TFDI+++N  A AG I H  LLV SL L+TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMI RLY VF++GL I  S++NV+A +G +T L
Sbjct:  110 AAAPGSASAPAA-----AEGEEHHETPPVVRDITWFDNGTMQ------VKVGTMIDGLSTLMLVVVTLISLLVHVFSTDYVAGDRRYTHYFAFLSLFTASMLFYVVSSSTLQMIVGWELVGLCSFALIGHWWEEKPNSDAALKAFLVNRVGDIGLLCGMIVLFFAAGRTFDIIQINELANAGEIRHFLLLVGSLSLMTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIARLYGVFFNGLSIGTSNINVMAVVGAVTLL 368          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: UPI001D127F6A (NADH-quinone oxidoreductase subunit L n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D127F6A)

HSP 1 Score: 362 bits (929), Expect = 3.640e-117
Identity = 183/250 (73.20%), Postives = 206/250 (82.40%), Query Frame = 1
Query:   70 EVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            E  A   PVV   TW  S  +      +I WGT +DG SV+MLVVVT IS LVH+FSTDYV GDRRYTHYFAFLSLFTASMLF+V+S ST+QMIVGWELVGVCSFALIGHWWE+  NSDAALKAFLTNRVGDIGLL+GMIILFFAA  +F I+++  AA  G IGH TLL+ASLCL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGI+M+ RLYPVF++GL I GSS+N LA +G +T L
Sbjct:  143 ESEAITRPVVRCATWIDSANS------SITWGTQIDGLSVMMLVVVTLISLLVHVFSTDYVHGDRRYTHYFAFLSLFTASMLFFVLSQSTLQMIVGWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLIGMIILFFAADRSFSIMDITIAANEGGIGHTTLLIASLCLIAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIFMVARLYPVFFEGLAIGGSSINALAVVGAVTAL 386          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A3M2GAN3_ACTSX (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GAN3_ACTSX)

HSP 1 Score: 348 bits (893), Expect = 9.620e-117
Identity = 174/251 (69.32%), Postives = 204/251 (81.27%), Query Frame = 1
Query:   67 HEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            HE     + V  S  W +SGG   D G       LVDG SV+ML VVT +S LVH++STDYV+GDRRYTH+FAFLSLFTASMLF+V+S +T+QMIVGWELVG+CSFALIGHWWED  NSDAALKAFLTNRVGD+GLLVGMI L+FAAG TFD + +N A VAG + H  L+VA+  L  AVMSKSGQF+LHTWLPDAMAGPTPVSALIHAATMVVAGIYM+GRLYPVF++G++I GSS+N+LA +G +T L
Sbjct:    1 HEAEPS-VAVHTSTKWLRSGGVDFDAGI------LVDGMSVMMLFVVTLVSLLVHVYSTDYVAGDRRYTHFFAFLSLFTASMLFFVLSDNTLQMIVGWELVGLCSFALIGHWWEDKANSDAALKAFLTNRVGDVGLLVGMITLYFAAGGTFDTVTINQAVVAGEVSHTALVVAATALTAAVMSKSGQFVLHTWLPDAMAGPTPVSALIHAATMVVAGIYMVGRLYPVFFEGMQIQGSSINLLAVVGAVTLL 244          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7Y2GKW3_9ACTN (NADH-quinone oxidoreductase subunit L n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKW3_9ACTN)

HSP 1 Score: 357 bits (917), Expect = 4.550e-115
Identity = 186/262 (70.99%), Postives = 211/262 (80.53%), Query Frame = 1
Query:   31 AFADADHGDDA-EHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGIT 813
            + AD + G +A E E     + +  S+TWFQSGG           G LVDG S++ML VVTFIS LVHI+STDYV+GDRRYTH+FAFLSLF+ASML  V+S+ST+Q I  WELVGVCSFALIGHWWE+  NSDAALKAFLTNRVGDIGLLVGMIILFFAAG+TFDIL +N  AVAG I H  LL ASLCL  AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAG++MI +LYPVF+DG  I+GSS+NVLA +G IT
Sbjct:  142 SLADPEEGAEAGEKEEEHPAVAIHRSFTWFQSGGHE------FSVGMLVDGLSIMMLFVVTFISLLVHIYSTDYVNGDRRYTHFFAFLSLFSASMLLLVMSSSTVQFITAWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDIGLLVGMIILFFAAGSTFDILTINEKAVAGEISHNLLLWASLCLTAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGVFMIAQLYPVFFDGYSIAGSSINVLAVIGSIT 397          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7K2E9D8_9ACTN (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E9D8_9ACTN)

HSP 1 Score: 344 bits (883), Expect = 5.830e-113
Identity = 177/257 (68.87%), Postives = 202/257 (78.60%), Query Frame = 1
Query:   49 HGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGITCL 819
            H DDA   V A    V  +  W  SGG   D G       LVDG SV+ML VVT +S LVH++STDYV+GD RYTH+FAFLSLFTA+MLF+V+S + +QMIVGWELVGVCSF LIGHWWE  +NSDAALKAF TNRVGD+GLLVG+ ILFFAAG TFD L L+    AG + H  L+VASLCLL AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYM+ RLYPVFW+G+ I+GSS+NVLA +G +T L
Sbjct:   84 HRDDAHEGVQA----VHRTVGWLHSGGVEYDAGI------LVDGLSVMMLFVVTAVSLLVHVYSTDYVAGDARYTHFFAFLSLFTAAMLFFVLSDNLLQMIVGWELVGVCSFVLIGHWWEHKENSDAALKAFFTNRVGDVGLLVGVSILFFAAGRTFDTLTLSERINAGEVSHTALVVASLCLLAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMVARLYPVFWEGMSIAGSSINVLALVGAVTLL 330          
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Match: A0A7X6APG0_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APG0_9ACTN)

HSP 1 Score: 337 bits (864), Expect = 4.460e-112
Identity = 171/260 (65.77%), Postives = 210/260 (80.77%), Query Frame = 1
Query:   43 ADHGDDAEHEVHAKPLPVVCSYT-WFQSGGAPGDGGATIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLFTASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLTNRVGDIGLLVGMIILFFAAGN--TFDILELNHAAVAGTIGHGTLLVASLCLLTAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVFWDGLRISGSSLNVLAAMGGIT 813
            A+ GD+ + +    P   V + T W Q+GG   + GA    G LVDG SV+M+ VVT +S LVH++STDYV GDRRYTH+FAFLSLFTASMLF+V+S + +QMIVGWELVGVCSF LIGHWWE+  NSDAALKAFLTNRVGD+GLL+G+  LFFAAG   TFD +++N A V GT+GH  L+VA+ CL+ AVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGI+++ RLYPVF++G++I GSS+N+LA +G +T
Sbjct:   79 AEEGDEKKEDGAVHPYVGVQNNTQWLQTGGV--EFGA----GILVDGLSVMMIFVVTVVSLLVHVYSTDYVDGDRRYTHFFAFLSLFTASMLFFVLSDNLLQMIVGWELVGVCSFVLIGHWWEEKPNSDAALKAFLTNRVGDVGLLIGVSTLFFAAGGGKTFDTVKINEAIVQGTVGHTALVVAAACLMAAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIFLVARLYPVFFEGMQIGGSSINLLATVGAVT 332          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85982.20038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IHY5_9ACTN3.930e-12468.88NADH-quinone oxidoreductase subunit L n=1 Tax=Acid... [more]
A0A847EPL9_9ACTN1.430e-11874.90NADH-quinone oxidoreductase subunit L n=1 Tax=Prop... [more]
A0A6I3GIP1_9ACTN8.370e-11869.63NADH-quinone oxidoreductase subunit L n=11 Tax=roo... [more]
A0A6J7RG52_9ZZZZ1.660e-11774.38Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A7X7D6A0_9ACTN2.700e-11770.37NADH-quinone oxidoreductase subunit L n=1 Tax=Acid... [more]
UPI001D127F6A3.640e-11773.20NADH-quinone oxidoreductase subunit L n=1 Tax=Aqui... [more]
A0A3M2GAN3_ACTSX9.620e-11769.32NADH-quinone oxidoreductase subunit L (Fragment) n... [more]
A0A7Y2GKW3_9ACTN4.550e-11570.99NADH-quinone oxidoreductase subunit L n=1 Tax=Acid... [more]
A0A7K2E9D8_9ACTN5.830e-11368.87NADH-quinone oxidoreductase subunit L (Fragment) n... [more]
A0A7X6APG0_9ACTN4.460e-11265.77Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85982contigM-pyrifera_M_contig85982:3..824 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score335.1
Seed ortholog evalue3.1e-89
Seed eggNOG ortholog1229780.BN381_160032
KEGG rclassRC00061
KEGG koko:K00341
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
EggNOG OGs2GIT4@201174,3UWAP@52018,COG1009@1,COG1009@2
EC1.6.5.3
COG Functional cat.CP
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size822
Cds size822
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816770.162296-CDS-M-pyrifera_M_contig85982:2..8241622816770.162296-CDS-M-pyrifera_M_contig85982:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85982 3..824 -
1692278168.2009006-CDS-M-pyrifera_M_contig85982:2..8241692278168.2009006-CDS-M-pyrifera_M_contig85982:2..824Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85982 3..824 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85982.20038.1prot_M-pyrifera_M_contig85982.20038.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85982 3..824 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85982.20038.1

>prot_M-pyrifera_M_contig85982.20038.1 ID=prot_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
DEDASAPGSLAFADADHGDDAEHEVHAKPLPVVCSYTWFQSGGAPGDGGA
TIPWGTLVDGQSVLMLVVVTFISFLVHIFSTDYVSGDRRYTHYFAFLSLF
TASMLFYVVSASTIQMIVGWELVGVCSFALIGHWWEDSDNSDAALKAFLT
NRVGDIGLLVGMIILFFAAGNTFDILELNHAAVAGTIGHGTLLVASLCLL
TAVMSKSGQFILHTWLPDAMAGPTPVSALIHAATMVVAGIYMIGRLYPVF
WDGLRISGSSLNVLAAMGGITCLG
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mRNA from alignment at M-pyrifera_M_contig85982:3..824-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85982.20038.1 ID=mRNA_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig85982:3..824- (Macrocystis pyrifera P11B4 male)
GACGAAGACGCCTCGGCCCCCGGGTCGCTCGCCTTCGCCGATGCCGATCA CGGCGACGACGCCGAGCACGAAGTCCACGCCAAGCCGCTCCCGGTCGTCT GCTCCTACACCTGGTTCCAGTCCGGCGGAGCGCCCGGCGACGGTGGTGCC ACCATTCCCTGGGGCACGCTCGTCGACGGCCAGTCGGTTCTCATGCTCGT GGTCGTCACGTTCATCTCGTTCTTGGTCCACATCTTCTCGACCGACTACG TGAGCGGCGATCGCCGGTACACGCACTACTTCGCCTTCCTCTCGTTGTTC ACCGCCTCGATGCTCTTCTATGTGGTGTCGGCCTCGACCATCCAGATGAT CGTCGGCTGGGAACTGGTTGGTGTGTGTTCGTTCGCATTGATCGGGCACT GGTGGGAAGACTCCGACAACTCCGACGCGGCGTTGAAGGCCTTCCTCACC AACCGAGTCGGCGACATCGGTCTGCTCGTCGGCATGATCATCCTCTTCTT CGCCGCCGGGAACACGTTCGACATCCTCGAGCTCAACCACGCGGCGGTTG CCGGAACCATCGGCCACGGGACCTTGTTGGTCGCCAGCCTCTGTCTGCTC ACCGCAGTGATGTCGAAGTCCGGTCAGTTCATCCTCCACACCTGGCTGCC CGACGCCATGGCGGGACCCACCCCGGTCTCGGCCCTGATCCACGCCGCCA CCATGGTGGTCGCCGGCATCTACATGATCGGCCGCCTCTACCCCGTGTTC TGGGATGGCCTGCGCATCTCCGGCTCGTCGCTGAACGTGCTCGCCGCCAT GGGCGGCATCACCTGCCTCGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85982:3..824-

>mRNA_M-pyrifera_M_contig85982.20038.1 ID=mRNA_M-pyrifera_M_contig85982.20038.1|Name=mRNA_M-pyrifera_M_contig85982.20038.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig85982:3..824- (Macrocystis pyrifera P11B4 male)
GACGAAGACGCCTCGGCCCCCGGGTCGCTCGCCTTCGCCGATGCCGATCA
CGGCGACGACGCCGAGCACGAAGTCCACGCCAAGCCGCTCCCGGTCGTCT
GCTCCTACACCTGGTTCCAGTCCGGCGGAGCGCCCGGCGACGGTGGTGCC
ACCATTCCCTGGGGCACGCTCGTCGACGGCCAGTCGGTTCTCATGCTCGT
GGTCGTCACGTTCATCTCGTTCTTGGTCCACATCTTCTCGACCGACTACG
TGAGCGGCGATCGCCGGTACACGCACTACTTCGCCTTCCTCTCGTTGTTC
ACCGCCTCGATGCTCTTCTATGTGGTGTCGGCCTCGACCATCCAGATGAT
CGTCGGCTGGGAACTGGTTGGTGTGTGTTCGTTCGCATTGATCGGGCACT
GGTGGGAAGACTCCGACAACTCCGACGCGGCGTTGAAGGCCTTCCTCACC
AACCGAGTCGGCGACATCGGTCTGCTCGTCGGCATGATCATCCTCTTCTT
CGCCGCCGGGAACACGTTCGACATCCTCGAGCTCAACCACGCGGCGGTTG
CCGGAACCATCGGCCACGGGACCTTGTTGGTCGCCAGCCTCTGTCTGCTC
ACCGCAGTGATGTCGAAGTCCGGTCAGTTCATCCTCCACACCTGGCTGCC
CGACGCCATGGCGGGACCCACCCCGGTCTCGGCCCTGATCCACGCCGCCA
CCATGGTGGTCGCCGGCATCTACATGATCGGCCGCCTCTACCCCGTGTTC
TGGGATGGCCTGCGCATCTCCGGCTCGTCGCTGAACGTGCTCGCCGCCAT
GGGCGGCATCACCTGCCTCGGTGACGAAGACGCCTCGGCCCCCGGGTCGC
TCGCCTTCGCCGATGCCGATCACGGCGACGACGCCGAGCACGAAGTCCAC
GCCAAGCCGCTCCCGGTCGTCTGCTCCTACACCTGGTTCCAGTCCGGCGG
AGCGCCCGGCGACGGTGGTGCCACCATTCCCTGGGGCACGCTCGTCGACG
GCCAGTCGGTTCTCATGCTCGTGGTCGTCACGTTCATCTCGTTCTTGGTC
CACATCTTCTCGACCGACTACGTGAGCGGCGATCGCCGGTACACGCACTA
CTTCGCCTTCCTCTCGTTGTTCACCGCCTCGATGCTCTTCTATGTGGTGT
CGGCCTCGACCATCCAGATGATCGTCGGCTGGGAACTGGTTGGTGTGTGT
TCGTTCGCATTGATCGGGCACTGGTGGGAAGACTCCGACAACTCCGACGC
GGCGTTGAAGGCCTTCCTCACCAACCGAGTCGGCGACATCGGTCTGCTCG
TCGGCATGATCATCCTCTTCTTCGCCGCCGGGAACACGTTCGACATCCTC
GAGCTCAACCACGCGGCGGTTGCCGGAACCATCGGCCACGGGACCTTGTT
GGTCGCCAGCCTCTGTCTGCTCACCGCAGTGATGTCGAAGTCCGGTCAGT
TCATCCTCCACACCTGGCTGCCCGACGCCATGGCGGGACCCACCCCGGTC
TCGGCCCTGATCCACGCCGCCACCATGGTGGTCGCCGGCATCTACATGAT
CGGCCGCCTCTACCCCGTGTTCTGGGATGGCCTGCGCATCTCCGGCTCGT
CGCTGAACGTGCTCGCCGCCATGGGCGGCATCACCTGCCTCGGT
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