mRNA_M-pyrifera_M_contig85874.20020.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A5C7AYG1_9FLAO (DUF1232 domain-containing protein n=2 Tax=Gelidibacter TaxID=49279 RepID=A0A5C7AYG1_9FLAO) HSP 1 Score: 60.8 bits (146), Expect = 1.570e-10 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDAR 126 P+DAIPDFIP GLIDDAAV L+L+ KD++DY W+D R Sbjct: 87 PIDAIPDFIPVVGLIDDAAVFAFCLRLLSKDIEDYKNWKDNR 128
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A1G7HMV7_9PSED (DUF1232 domain-containing protein n=2 Tax=Pseudomonas seleniipraecipitans TaxID=640205 RepID=A0A1G7HMV7_9PSED) HSP 1 Score: 59.7 bits (143), Expect = 5.880e-10 Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKR 132 PLDAIPDFIPG GL+DD AV+ +K G +LD + WRDA+ R Sbjct: 84 PLDAIPDFIPGLGLVDDLAVLAWVMKTWGNELDAFRVWRDAQDR 127
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A8J7VQA6_9GAMM (DUF1232 domain-containing protein n=1 Tax=Coralloluteibacterium stylophorae TaxID=1776034 RepID=A0A8J7VQA6_9GAMM) HSP 1 Score: 59.3 bits (142), Expect = 7.090e-10 Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDA 123 P+D +PDFIPG GL+DDA V+GL LK I DL+DY W+ A Sbjct: 88 PIDVLPDFIPGLGLMDDAVVIGLCLKAIRSDLEDYLRWKRA 128
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI00140C6AE9 (YkvA family protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI00140C6AE9) HSP 1 Score: 58.9 bits (141), Expect = 1.240e-9 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 120 PLDA+PDFIP AG +DDA + L L+GKDL+DY WRD Sbjct: 92 PLDAVPDFIPLAGYLDDAFIFKLVFDLVGKDLEDYKRWRD 131
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A656DB64_9BACT (Uncharacterized membrane protein YkvA, DUF1232 family n=1 Tax=Candidatus Kryptobacter tengchongensis TaxID=1643429 RepID=A0A656DB64_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 1.410e-9 Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWR 117 P DAIPDFIPG G IDDAAVVG+ +K I DL++Y W+ Sbjct: 89 PADAIPDFIPGIGYIDDAAVVGMVIKAIFSDLENYAQWK 127
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI000A6A4273 (DUF1232 domain-containing protein n=1 Tax=Neobacillus soli TaxID=220688 RepID=UPI000A6A4273) HSP 1 Score: 58.5 bits (140), Expect = 1.560e-9 Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWR 117 PLD +PDFI G GL+DDAAV+G +K I K+LDD+ AW+ Sbjct: 90 PLDLVPDFIIGLGLLDDAAVIGYTVKKISKELDDFSAWK 128
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A259TYX4_9BACT (DUF1232 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX4_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 2.650e-9 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 120 P+D IPDFIP G IDDAAV+GLAL+ + KDL+ + AW D Sbjct: 91 PVDLIPDFIPVVGYIDDAAVIGLALRYVRKDLEAFEAWED 130
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: A0A4R7PXS1_9FLAO (Uncharacterized membrane protein YkvA (DUF1232 family) n=1 Tax=Gelidibacter sediminis TaxID=1608710 RepID=A0A4R7PXS1_9FLAO) HSP 1 Score: 57.4 bits (137), Expect = 3.530e-9 Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDAR 126 P+DAIPDF+P GLIDDAAV ++L+ KD++DY W++++ Sbjct: 87 PIDAIPDFLPVVGLIDDAAVFAFCIRLLSKDIEDYKNWKESQ 128
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI0016725663 (DUF1232 domain-containing protein n=1 Tax=Marinobacter zhanjiangensis TaxID=578215 RepID=UPI0016725663) HSP 1 Score: 57.0 bits (136), Expect = 6.540e-9 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRD 120 PLD IPD I G GL+DDAAVVGL L+L+ DL Y AW++ Sbjct: 88 PLDLIPDLIVGVGLLDDAAVVGLCLRLVESDLHRYAAWKE 127
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Match: UPI00041FECEA (DUF1232 domain-containing protein n=1 Tax=Streptococcus suis TaxID=1307 RepID=UPI00041FECEA) HSP 1 Score: 54.7 bits (130), Expect = 7.210e-9 Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 1 PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKRRQD 141 P+DA+PDFI GAGL+DDA V+ LKLI D+DD+ +W+ ++ + ++ Sbjct: 7 PIDALPDFILGAGLLDDAFVLNACLKLIKTDVDDFRSWQASQWKAEE 53 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85874.20020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85874.20020.1 >prot_M-pyrifera_M_contig85874.20020.1 ID=prot_M-pyrifera_M_contig85874.20020.1|Name=mRNA_M-pyrifera_M_contig85874.20020.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp PLDAIPDFIPGAGLIDDAAVVGLALKLIGKDLDDYGAWRDARKRRQDG*back to top mRNA from alignment at M-pyrifera_M_contig85874:709..855- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85874.20020.1 ID=mRNA_M-pyrifera_M_contig85874.20020.1|Name=mRNA_M-pyrifera_M_contig85874.20020.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=147bp|location=Sequence derived from alignment at M-pyrifera_M_contig85874:709..855- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85874:709..855- >mRNA_M-pyrifera_M_contig85874.20020.1 ID=mRNA_M-pyrifera_M_contig85874.20020.1|Name=mRNA_M-pyrifera_M_contig85874.20020.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig85874:709..855- (Macrocystis pyrifera P11B4 male)back to top |