mRNA_M-pyrifera_M_contig85819.20010.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85819.20010.1
Unique NamemRNA_M-pyrifera_M_contig85819.20010.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A7S0PFM9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PFM9_CAFRO)

HSP 1 Score: 354 bits (908), Expect = 2.320e-117
Identity = 181/286 (63.29%), Postives = 212/286 (74.13%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATHGDGLSAEKKDREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSA---GEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ IDD +LLP  DNLYLDMNG IHGATHGDGLS    D E+M +M +YID++VK  R R L++ AVDGVAPRAKMNQQRSRRFRAAKD  EA   A   GE   D + FDSN ITPGT FM RVS  L+Y +R ++RDDPAW  LRII SG +VPGEGEHKI+E++R  KS+PG++PNTRH MAGLDADLIML+LA+HEPHFSL+REQIDFM F   KH +K  TR+    KWQL+HIGVLRE +EMD+RP            +    F +DGER +DDFVLLT
Sbjct:   24 INQAIDDATLLPHFDNLYLDMNGVIHGATHGDGLSKSLTDSEVMHKMFSYIDNMVKITRPRKLIYFAVDGVAPRAKMNQQRSRRFRAAKDAAEARAEAREMGEVFDDEDLFDSNQITPGTPFMARVSKQLQYYIRRRLRDDPAWRDLRIIFSGHEVPGEGEHKIVEWIRAAKSQPGWDPNTRHIMAGLDADLIMLSLAVHEPHFSLLREQIDFMGFRNSKHDTKAKTRAARHVKWQLLHIGVLREYLEMDMRPA--------PAALEAMPFAWDGERCVDDFVLLT 301          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A7S1C2Z7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Z7_9STRA)

HSP 1 Score: 333 bits (854), Expect = 4.880e-110
Identity = 168/288 (58.33%), Postives = 214/288 (74.31%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATHG-DGLSAEKKDREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDR---KEAMLSAGEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFG-QPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ + D +L+P  DNLYLDMNG IH ATHG DGLSA+  ++E+M  M  YID +VK V+   LL+MAVDGVAPRAKMNQQRSRRFRAA+D    K    + GEE+ +   FDSNCITPGT FM RVS H+RY VR+K+++DP W  L++I SG +VPGEGEHKIM ++R+ K +PGY+PN RHCM GLDADLIML+LA HEPHF+L+REQIDFM+F  Q ++S+KD+ + +   KWQ++H+  LRE + +D+RP    +           GFE+DGERV+DDFVLLT
Sbjct:   17 INQPLADNTLMPEFDNLYLDMNGIIHTATHGNDGLSAKITEKELMLSMFRYIDRMVKIVKPTQLLYMAVDGVAPRAKMNQQRSRRFRAARDMAHDKAEARARGEEIDESTLFDSNCITPGTEFMARVSLHMRYFVRKKMKEDPFWQRLKVIFSGHEVPGEGEHKIMAYIRQTKFQPGYDPNVRHCMCGLDADLIMLSLASHEPHFALLREQIDFMAFKRQGRNSTKDLVKKVDTVKWQMLHVETLREYLALDMRPAEDVLAT--------MGFEFDGERVVDDFVLLT 296          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A5A8CBE2_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CBE2_CAFRO)

HSP 1 Score: 354 bits (908), Expect = 1.960e-108
Identity = 181/286 (63.29%), Postives = 212/286 (74.13%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATHGDGLSAEKKDREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSA---GEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ IDD +LLP  DNLYLDMNG IHGATHGDGLS    D E+M +M +YID++VK  R R L++ AVDGVAPRAKMNQQRSRRFRAAKD  EA   A   GE   D + FDSN ITPGT FM RVS  L+Y +R ++RDDPAW  LRII SG +VPGEGEHKI+E++R  KS+PG++PNTRH MAGLDADLIML+LA+HEPHFSL+REQIDFM F   KH +K  TR+    KWQL+HIGVLRE +EMD+RP            +    F +DGER +DDFVLLT
Sbjct:   17 INQAIDDATLLPHFDNLYLDMNGVIHGATHGDGLSKSLTDSEVMHKMFSYIDNMVKITRPRKLIYFAVDGVAPRAKMNQQRSRRFRAAKDAAEARAEAREMGEVFDDEDLFDSNQITPGTPFMARVSKQLQYYIRRRLRDDPAWRDLRIIFSGHEVPGEGEHKIVEWIRAAKSQPGWDPNTRHIMAGLDADLIMLSLAVHEPHFSLLREQIDFMGFRNSKHDTKAKTRAARHVKWQLLHIGVLREYLEMDMRPA--------PAALEAMPFAWDGERCVDDFVLLT 294          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 4.000e-88
Identity = 152/290 (52.41%), Postives = 196/290 (67.59%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATH--GDGLSAEKKDREIMSEMMAYIDHIVK-TVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAML---SAGEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDF-MSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ + D +LLP  DNLYLDMNG +H  TH   DGLSA+  +R+I+  +  YID IV   VR R +L+MA+DGVAPRAKMNQQRSRRFRA KD +EA L   S GE + D   FDSNCITPGT FM ++S HLRY V++K+ +DP W  L +  SG +VPGEGEHKIM ++R E+S     PNTRHCM G DADLI+L L  HEPHF+L+RE ++F  +  + K++SK V ++  + ++QL+H+ VLRE +  +        + EET        E D ERV+DDFV LT
Sbjct:   17 INQIVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLIAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNAARGKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRD----MPEETAA------EMDRERVVDDFVFLT 296          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A0G4FMX9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMX9_VITBC)

HSP 1 Score: 283 bits (723), Expect = 2.490e-83
Identity = 146/284 (51.41%), Postives = 201/284 (70.77%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATHGDGLSAEKKDREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSAGEEMGD-GEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRP-PRWEVVDEETGEVHHPGFEYDGERVIDDFVLL 846
            IN++I+   + P  DN YLDMNG IHG THG+   +  K+ ++ + +  YI+H+   V+ + L++MAVDGVAPRAKMNQQRSRRFRAA+D KE+   A E MGD    FDSNCITPGT FM R++ HL+Y V +K++ DP W  + +I+SG DVPGEGEHKIM+F+RR K++PGY+PNTRHC+ GLDADLIML+LA HEPHF+L+RE+I    FG+ K    +      + K QL+HI ++RE +++++RP P++         +    ++YD ERVIDDF+L 
Sbjct:   17 INEQIEFDQI-PEFDNFYLDMNGIIHGCTHGNTGKSFVKEEDVWTSVFQYINHLFYIVKPKRLIYMAVDGVAPRAKMNQQRSRRFRAAQDNKESKEKA-EAMGDTSNRFDSNCITPGTEFMDRLTKHLQYFVFKKIQQDPLWQGIDVILSGPDVPGEGEHKIMDFIRRSKAQPGYDPNTRHCLYGLDADLIMLSLASHEPHFALLREEI---IFGKQKTQGIEHRVLTKKEKLQLLHISLVREYLDLEMRPGPKY---------LSKLKYKYDPERVIDDFILF 286          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A059LEQ3_9CHLO (XRN 5'-3' exonuclease (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LEQ3_9CHLO)

HSP 1 Score: 258 bits (658), Expect = 3.720e-81
Identity = 133/278 (47.84%), Postives = 183/278 (65.83%), Query Frame = 1
Query:   25 SLLPAVDNLYLDMNGYIHGATHGDGLSAEKKDREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSAGEEMG----DGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLL 846
            ++ P +DNLYLDMNG IH  THG+       + E++  +  Y+D I+  +R + LLFMAVDGVAPRAKMNQQRSRRF+ AK+ + A L A +  G      E FDSNCITPGT+FM R+S H+++ +R+++ +DP W    I+ SG DVPGEGEHKIME++R  K  PGY PNTRHC+ GLDADLIMLAL  HEPHF L+RE + ++  G+ +  S+D+  +  +  + ++HIG+LR+ +E++            +G      FE   ERVIDD +L 
Sbjct:   23 TVFPVMDNLYLDMNGIIHNCTHGNREDVSLSEEEMVEAIFRYLDKIMHIMRPQKLLFMAVDGVAPRAKMNQQRSRRFKTAKEAEAARLEAEKAGGAPDKQRERFDSNCITPGTSFMARLSAHVKFFIRKRMAEDPVWRRPTIVFSGHDVPGEGEHKIMEYIRWMKRDPGYLPNTRHCLYGLDADLIMLALVSHEPHFCLLREVVSYVGGGRGQ-PSRDIFENPCQEHFVILHIGLLRDYLELEFS----------SGTALPFAFEL--ERVIDDLILF 287          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A7S2RDX7_9STRA (5'-3' exoribonuclease 1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RDX7_9STRA)

HSP 1 Score: 276 bits (706), Expect = 4.470e-81
Identity = 145/295 (49.15%), Postives = 195/295 (66.10%), Query Frame = 1
Query:    1 INQRID-DGSLLPAVDNLYLDMNGYIHGATHGDGLSAEKKD--REIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSAGEE--MGDGEA---FDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPK----HSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ+I  D   LP  DN+YLDMNG IH  TH +      K   ++++  M +Y+D +V  VR + +L +AVDG APRAKMNQQRSRRF +AKDR++A+  A  E  + + EA   FDSNCITPGT FM+ VS H +Y VR K+++DP W  L ++ SG DVPGEGEHKIM+++R  + +PGY+PNTRHC+ GLDADLIML LA HEPHFSL+RE++DF      K     S+K++ + + + KW+L+H+  LR+ +E+D R                  F YD ER+IDD+VLL 
Sbjct:   17 INQKIGKDTEFLPKFDNMYLDMNGIIHNCTHPNDEDVTDKISMKDMVLGMFSYVDRMVHIVRPQKVLVLAVDGCAPRAKMNQQRSRRFASAKDRRDALAKALREGTVTEEEAREQFDSNCITPGTKFMEEVSRHFQYFVRLKIKEDPLWRKLTVVYSGHDVPGEGEHKIMDYIRHTRMQPGYDPNTRHCLCGLDADLIMLGLASHEPHFSLLREEVDFTGGRGGKKGGSQSTKEIKKQVEQDKWELLHLSALRQYLELDFRLDL--------------SFGYDLERIIDDWVLLV 297          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A4RZ74_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ74_OSTLU)

HSP 1 Score: 262 bits (669), Expect = 5.460e-81
Identity = 138/281 (49.11%), Postives = 190/281 (67.62%), Query Frame = 1
Query:   22 GSLLPAVDNLYLDMNGYIHGATHGDGLSAEKK--DREIMSEMMAYIDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFR----AAKDRKEAMLSAGEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLL 846
            G+ +P +DNLYLDMNG IH  +HG G     +  + E+MS++ AY+DH+ +  R   +L+MA+DGVAPRAKMNQQRSRRFR    AAKDR+EA         +GE FDSNCITPGT FM R++ HL++ VR+K  +DP WA + +I+SG +V GEGEHKIME +R  +++P + PN  HC+ GLDADLIMLAL  HEPHF L+RE + F   G+    S+++  + ++  + L+HIG+LRE ++++ R            E + P F Y+ ERVIDDF+LL
Sbjct:   23 GNQIPGIDNLYLDMNGVIHNCSHGAGTDVNTRMTEDEMMSKVFAYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQQRSRRFRSAAEAAKDREEAXXXXXXXX-EGEPFDSNCITPGTEFMARLTEHLKFYVRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPDWEPNQTHCLYGLDADLIMLALVTHEPHFCLLREVVKFGG-GEKGQPSREILSNPTDDGFILLHIGLLREYLDLEFR------------EKNLP-FGYELERVIDDFILL 288          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A482SU95_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU95_9ARCH)

HSP 1 Score: 273 bits (699), Expect = 1.550e-80
Identity = 147/292 (50.34%), Postives = 192/292 (65.75%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATH-GDGLSAEKKD-REIMSEMMAYIDHIV-KTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSA---GEEMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMSFGQPKHSS---KDVTRSMSEGKWQLMHIGVLRECIEMDLRPPRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQ I   ++LP  DNLYLDMNG IH  TH  D  +A     RE+M  +  YID IV + V+ + +LF+A+DGVAPRAK+NQQR+RRFRAA+DR E++  A   GE + +   FDSNCITPGT FM+ V  HL+Y +R+K+++DP WA L +I SG DVPGEGEHKIM+++R  ++ P Y PN RHCM G DADLIML+L  HEPHF+L+RE I F     PKH     + V +   E ++QL+HI +LRE I +D                H+   E D ER++DDF+LLT
Sbjct:   17 INQLISGTAILPEFDNLYLDMNGIIHACTHPNDNHAANSLTLREMMLSIFRYIDRIVTEIVKPKKVLFLAIDGVAPRAKLNQQRARRFRAAQDRAESIEKAKQRGEVIDESNLFDSNCITPGTEFMETVHRHLKYYIRKKIKEDPIWAALTVIYSGHDVPGEGEHKIMQYIRDLRASPTYEPNVRHCMYGQDADLIMLSLTTHEPHFALLREVIQF---NLPKHKKAVREVVYKQTQEAQFQLLHISLLREYIALDFG--------------HNMSVEMDTERIVDDFILLT 291          
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Match: A0A1V9Y4Z8_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4Z8_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.640e-80
Identity = 147/297 (49.49%), Postives = 191/297 (64.31%), Query Frame = 1
Query:    1 INQRIDDGSLLPAVDNLYLDMNGYIHGATHGDG--LSAEKKDREIMSEMMAYIDHIVK-TVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSAGEEMGD-------GEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISGGDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPHFSLMREQIDFMS---FGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRPP-RWEVVDEETGEVHHPGFEYDGERVIDDFVLLT 849
            INQRI D SLLP  DNLYLD+NG IH  TH +   +  E  D + +  + AYID IV   V+ + LLF+AVDGVAPRAK+NQQRSRRFRA  +  E  L+   +  D       G  FDSNCITPGT FM R+S HL+Y +R+K+++DPAW  L +I SG +VPGEGEHKI+E++RR K +PGY PN RHCM G DADL++L +  HEPHF+L+RE +DF       + +++ K V R   E +WQL+H+ V RE ++M+LR    W                YD ER +DDF+ LT
Sbjct:   17 INQRISDVSLLPEFDNLYLDLNGIIHQCTHPNDQEVCEELGDPQQIPAIFAYIDRIVTHIVKPKQLLFLAVDGVAPRAKLNQQRSRRFRAGMELHEKNLALQRDRADDDEEGPRGALFDSNCITPGTEFMYRLSQHLQYFIRKKLKEDPAWRNLTVIFSGQEVPGEGEHKIVEYIRRTKMQPGYPPNVRHCMYGSDADLMLLGIMTHEPHFTLLREVVDFTGGRRSARDENTKKIVARQTKEQEWQLVHLSVFREYLDMELRADVPW----------------YDTERALDDFIFLT 297          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85819.20010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0PFM9_CAFRO2.320e-11763.29Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A7S1C2Z7_9STRA4.880e-11058.33Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5A8CBE2_CAFRO1.960e-10863.29Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
D7FME5_ECTSI4.000e-8852.415'-3' exoribonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A0G4FMX9_VITBC2.490e-8351.41Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A059LEQ3_9CHLO3.720e-8147.84XRN 5'-3' exonuclease (Fragment) n=1 Tax=Helicospo... [more]
A0A7S2RDX7_9STRA4.470e-8149.155'-3' exoribonuclease 1 n=1 Tax=labyrinthulid quah... [more]
A4RZ74_OSTLU5.460e-8149.11Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
A0A482SU95_9ARCH1.550e-8050.34Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9Y4Z8_9STRA1.640e-8049.495'-3' exoribonuclease 1 n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85819contigM-pyrifera_M_contig85819:2..850 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.7
Seed ortholog evalue1.9e-73
Seed eggNOG ortholog2880.D7FME5
KEGG koko:K12618
KEGG Pathwayko03008,ko03018,map03008,map03018
Hectar predicted targeting categoryother localisation
EggNOG free text desc.5'-3' exoribonuclease activity
EggNOG OGsCOG5049@1,KOG2045@2759
COG Functional cat.ADL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03019,ko03036
Exons1
Model size849
Cds size849
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.4364588-CDS-M-pyrifera_M_contig85819:1..8501622816768.4364588-CDS-M-pyrifera_M_contig85819:1..850Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85819 2..850 +
1692278167.0507483-CDS-M-pyrifera_M_contig85819:1..8501692278167.0507483-CDS-M-pyrifera_M_contig85819:1..850Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85819 2..850 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85819.20010.1prot_M-pyrifera_M_contig85819.20010.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85819 2..850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85819.20010.1

>prot_M-pyrifera_M_contig85819.20010.1 ID=prot_M-pyrifera_M_contig85819.20010.1|Name=mRNA_M-pyrifera_M_contig85819.20010.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
INQRIDDGSLLPAVDNLYLDMNGYIHGATHGDGLSAEKKDREIMSEMMAY
IDHIVKTVRSRSLLFMAVDGVAPRAKMNQQRSRRFRAAKDRKEAMLSAGE
EMGDGEAFDSNCITPGTAFMQRVSGHLRYLVREKVRDDPAWACLRIIISG
GDVPGEGEHKIMEFVRREKSKPGYNPNTRHCMAGLDADLIMLALALHEPH
FSLMREQIDFMSFGQPKHSSKDVTRSMSEGKWQLMHIGVLRECIEMDLRP
PRWEVVDEETGEVHHPGFEYDGERVIDDFVLLT
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mRNA from alignment at M-pyrifera_M_contig85819:2..850+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85819.20010.1 ID=mRNA_M-pyrifera_M_contig85819.20010.1|Name=mRNA_M-pyrifera_M_contig85819.20010.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=849bp|location=Sequence derived from alignment at M-pyrifera_M_contig85819:2..850+ (Macrocystis pyrifera P11B4 male)
ATTAACCAACGCATTGACGATGGGTCGTTACTGCCTGCGGTGGACAACTT GTACCTAGACATGAATGGGTATATTCATGGAGCAACACATGGGGATGGTT TGTCTGCAGAGAAGAAGGACAGGGAGATCATGAGCGAGATGATGGCGTAT ATTGACCACATTGTGAAGACGGTACGGTCACGTTCACTCCTGTTTATGGC TGTGGATGGTGTGGCACCACGTGCGAAGATGAATCAACAACGCTCTCGGC GTTTTCGTGCTGCAAAAGACCGGAAAGAGGCCATGTTGAGTGCAGGGGAG GAGATGGGAGATGGAGAAGCGTTTGATAGCAACTGCATTACTCCAGGGAC TGCGTTTATGCAGCGTGTGAGTGGACATTTGCGCTACTTGGTGCGTGAGA AAGTACGAGATGATCCAGCTTGGGCTTGTTTGCGTATTATCATTTCTGGA GGAGATGTGCCAGGCGAAGGGGAGCACAAGATCATGGAATTTGTACGAAG GGAGAAGAGTAAACCAGGTTACAATCCCAATACACGGCATTGCATGGCCG GGTTGGATGCAGATTTGATTATGCTGGCTTTGGCACTGCATGAACCTCAC TTTTCGTTGATGCGTGAGCAAATTGACTTTATGAGCTTTGGACAACCCAA ACACTCTAGCAAAGATGTCACTCGGAGCATGTCAGAAGGGAAGTGGCAAC TCATGCACATTGGTGTGTTGCGAGAATGCATTGAGATGGATCTCAGGCCG CCACGATGGGAGGTGGTGGATGAGGAGACGGGAGAAGTACATCATCCGGG ATTTGAATATGATGGGGAACGTGTGATTGATGACTTTGTGTTGCTCACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85819:2..850+

>mRNA_M-pyrifera_M_contig85819.20010.1 ID=mRNA_M-pyrifera_M_contig85819.20010.1|Name=mRNA_M-pyrifera_M_contig85819.20010.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig85819:2..850+ (Macrocystis pyrifera P11B4 male)
ATTAACCAACGCATTGACGATGGGTCGTTACTGCCTGCGGTGGACAACTT
GTACCTAGACATGAATGGGTATATTCATGGAGCAACACATGGGGATGGTT
TGTCTGCAGAGAAGAAGGACAGGGAGATCATGAGCGAGATGATGGCGTAT
ATTGACCACATTGTGAAGACGGTACGGTCACGTTCACTCCTGTTTATGGC
TGTGGATGGTGTGGCACCACGTGCGAAGATGAATCAACAACGCTCTCGGC
GTTTTCGTGCTGCAAAAGACCGGAAAGAGGCCATGTTGAGTGCAGGGGAG
GAGATGGGAGATGGAGAAGCGTTTGATAGCAACTGCATTACTCCAGGGAC
TGCGTTTATGCAGCGTGTGAGTGGACATTTGCGCTACTTGGTGCGTGAGA
AAGTACGAGATGATCCAGCTTGGGCTTGTTTGCGTATTATCATTTCTGGA
GGAGATGTGCCAGGCGAAGGGGAGCACAAGATCATGGAATTTGTACGAAG
GGAGAAGAGTAAACCAGGTTACAATCCCAATACACGGCATTGCATGGCCG
GGTTGGATGCAGATTTGATTATGCTGGCTTTGGCACTGCATGAACCTCAC
TTTTCGTTGATGCGTGAGCAAATTGACTTTATGAGCTTTGGACAACCCAA
ACACTCTAGCAAAGATGTCACTCGGAGCATGTCAGAAGGGAAGTGGCAAC
TCATGCACATTGGTGTGTTGCGAGAATGCATTGAGATGGATCTCAGGCCG
CCACGATGGGAGGTGGTGGATGAGGAGACGGGAGAAGTACATCATCCGGG
ATTTGAATATGATGGGGAACGTGTGATTGATGACTTTGTGTTGCTCACTA
TTAACCAACGCATTGACGATGGGTCGTTACTGCCTGCGGTGGACAACTTG
TACCTAGACATGAATGGGTATATTCATGGAGCAACACATGGGGATGGTTT
GTCTGCAGAGAAGAAGGACAGGGAGATCATGAGCGAGATGATGGCGTATA
TTGACCACATTGTGAAGACGGTACGGTCACGTTCACTCCTGTTTATGGCT
GTGGATGGTGTGGCACCACGTGCGAAGATGAATCAACAACGCTCTCGGCG
TTTTCGTGCTGCAAAAGACCGGAAAGAGGCCATGTTGAGTGCAGGGGAGG
AGATGGGAGATGGAGAAGCGTTTGATAGCAACTGCATTACTCCAGGGACT
GCGTTTATGCAGCGTGTGAGTGGACATTTGCGCTACTTGGTGCGTGAGAA
AGTACGAGATGATCCAGCTTGGGCTTGTTTGCGTATTATCATTTCTGGAG
GAGATGTGCCAGGCGAAGGGGAGCACAAGATCATGGAATTTGTACGAAGG
GAGAAGAGTAAACCAGGTTACAATCCCAATACACGGCATTGCATGGCCGG
GTTGGATGCAGATTTGATTATGCTGGCTTTGGCACTGCATGAACCTCACT
TTTCGTTGATGCGTGAGCAAATTGACTTTATGAGCTTTGGACAACCCAAA
CACTCTAGCAAAGATGTCACTCGGAGCATGTCAGAAGGGAAGTGGCAACT
CATGCACATTGGTGTGTTGCGAGAATGCATTGAGATGGATCTCAGGCCGC
CACGATGGGAGGTGGTGGATGAGGAGACGGGAGAAGTACATCATCCGGGA
TTTGAATATGATGGGGAACGTGTGATTGATGACTTTGTGTTGCTCACT
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