mRNA_M-pyrifera_M_contig85800.20007.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85800.20007.1
Unique NamemRNA_M-pyrifera_M_contig85800.20007.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A7S1C3Y5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3Y5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.480e-49
Identity = 101/269 (37.55%), Postives = 155/269 (57.62%), Query Frame = 1
Query:    7 RFDKFMDPLRAAGEMVASFLDR-GDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPE--IFFKFADALRRGVQVEELYDATHAASAIDSLATFFVRADHR 804
            RF +FM PL    E +    +R G+KS E + ++ G  RDLRG+  A  ++R YTL+FD+L+P  + V V A+  +A+ P V   +LKF  E  +NR  RI F   SP+GVLLFR  S     Y + I +        +Y  +YKGV++++++LA  ++G + PFGVF LY DD L +AL T + L  ++P+E +    KL  +Y+HL+  LFR + + L    P   +F +   +L+ G+   +   + HAA A+D LA FFVR+  +
Sbjct:  450 RFVEFMAPLI---ETLMMLRERTGEKSPEVMQLLVGVCRDLRGIALATNNKRTYTLLFDQLYPDHMGVFVSALEVWADVPAVTTSVLKFIREFVSNRAGRIKFDSCSPAGVLLFREASNTLVAYGSRISEFTPDNELALYPAKYKGVSISMSLLAACLDGEYVPFGVFDLYGDDCLSKALQTVLGLALSVPMEDMLSFKKLGTSYFHLMQLLFRDHLKFLTASDPATGVFIQLVRSLQEGLDSLDPRFSMHAAMAVDCLAAFFVRSSSK 715          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A7S3XL54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL54_HETAK)

HSP 1 Score: 175 bits (444), Expect = 9.660e-48
Identity = 94/262 (35.88%), Postives = 148/262 (56.49%), Query Frame = 1
Query:   10 FDKFMDPLRAAGEMVASFLDRGDKSEEALGI-VQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFFVR 792
            FD+FM+PL A   ++A      D  +E++ + + G  RDLRG+ AA  +RR Y+++F+ L+P    +   A   + + PLV+  LLKF  E A N+  R+ F  +SP+G+LLFR LS  +  Y   +   P    +D+YK++YKGVA+ L +L   + G +  FGVFALY D  L+ AL+ A+ L   +P+E +  +PK A+AY+     LFR++T  L  +    F +   A   G+   +   A   A+ ID LA+++ R
Sbjct:  139 FDRFMEPLLA---LMAQLNATPDLRQESVKMAISGLCRDLRGITAATNNRRTYSILFEMLYPTYFPIFTRAAETWYDSPLVMTALLKFLTEFAFNKGQRLVFDQSSPNGILLFRELSQVAVAYGRRLGAAPTAG-NDLYKEKYKGVAMILNLLTTALSGNYVNFGVFALYNDKALEDALAVALELCLNVPVEEVIVYPKFAKAYFSFFEVLFRNHTETLIALETPTFLQVVRAQHDGITALDTPMAAQCANTIDHLASYYFR 396          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A803LZU8_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LZU8_CHEQI)

HSP 1 Score: 169 bits (428), Expect = 1.550e-46
Identity = 94/261 (36.02%), Postives = 146/261 (55.94%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFF 786
            V+F + +DPL+     + S  D   + E     + G  RD+RG+  A  SR+ Y  +FD L+PA + +L+ AIA + + P V  PLLKF+AEL  N+  R++F  +SPSG+LLF  +S     Y + I  +      D+Y+ +YKG+ V+L+IL   I+G +  FGVF LY D  LD AL  A  ++ +IP+  L  + K++RAY+  +   F    +  C++    F     +L  G++  E    +  ASAI+SLATF+
Sbjct:    8 VKFKQAIDPLQQVFVNLESIPDPLFRDETVKCAIAGLMRDIRGIAMAIHSRKAYGFLFDWLYPAHMPLLLKAIATWIDCPEVTTPLLKFYAELVLNKSQRLTFAQSSPSGILLFWEVSKLLVAYGSRI--LALSGPKDVYRTKYKGIWVSLSILTSAIDGNYVNFGVFELYGDKALDDALDIAFKMILSIPVVDLLAYRKVSRAYFSFIDIFFSKLIKFSCNLDGTTFKNIVTSLHSGIKNIESNIVSQCASAINSLATFY 266          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A8J4RDA3_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4RDA3_9ROSI)

HSP 1 Score: 172 bits (436), Expect = 1.770e-46
Identity = 99/263 (37.64%), Postives = 150/263 (57.03%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQ--VEELYDATHAASAIDSLATFF 786
            ++F   MDPL      + S  D    S++    + G  RDLRG+  A +S R Y  +FD L+PARL +L+ AIA + + P V  PLLKF AEL  N+  R++F  +SP+G+LLFR +S     Y + I  +P     D+Y  +YKG+ + LTIL R + G +  FGVF LY D +L  AL  A+ ++ +IP+  + +  KLA+AY+  L  LF S+   + ++    F     +L  G++  +E +  +T  ASA+D LATF+
Sbjct:  146 LKFKSSMDPLLQVFVSLESTSDATFHSDDVKYALIGLMRDLRGIAMATKSHRTYCFLFDWLYPARLPLLLKAIAYWTDTPEVTTPLLKFIAELVLNKSERLAFDSSSPNGILLFREVSKLIVAYGSRI--LPLRNAADMYTFKYKGIWICLTILTRALAGNYVNFGVFELYGDRSLADALDVALRMILSIPLADVLKFRKLAQAYFAFLEILFNSHMAFILNLDTSTFMYIVGSLEAGLKGLIENI--STQCASAVDKLATFY 404          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A453ERC1_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ERC1_AEGTS)

HSP 1 Score: 164 bits (414), Expect = 4.870e-45
Identity = 91/263 (34.60%), Postives = 147/263 (55.89%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYT--RELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFF 786
            V+F  FM+PL      + +  D   +++       G  RDLRG+  A  SRR Y L+FD L+P+R+ +L+ AI+   + P V  PLLKF +E   N+  R++F  +SP+G+LLFR +S     Y + I  +P     +IY+ +YKG+ ++LT+L+R + G +  FGVF LY D  L  AL  ++ +  +IP+  +    KL++AYY  +  LF ++     + ++    F     +L  G++  +   +T  ASAIDSLA F+
Sbjct:    6 VKFRSFMEPLLQVAVNLEASADAAFRTDVVKYAFTGLMRDLRGIAMATNSRRTYGLLFDWLYPSRMPLLLRAISLLTDEPEVTTPLLKFMSEFVLNKAQRLTFDSSSPNGILLFREISKLIVAYGSRILLLPNGT--NIYRSKYKGIWISLTVLSRALCGNYVNFGVFELYGDRALADALDISLKMTLSIPLSDILTFKKLSKAYYGYMEVLFNNHITINSVLNLDTSTFVHIVTSLESGLKGLDTGISTQCASAIDSLAAFY 266          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: UPI0012465C8A (exportin-7-like n=2 Tax=Quercus TaxID=3511 RepID=UPI0012465C8A)

HSP 1 Score: 172 bits (436), Expect = 5.360e-45
Identity = 99/263 (37.64%), Postives = 150/263 (57.03%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQ--VEELYDATHAASAIDSLATFF 786
            ++F   MDPL      + S  D    S+     + G  RDLRG+  A +S R Y  +FD L+PARL +L+ AIA + + P V  PLLKF AEL  N+  R++F  +SP+G+LLFR +S  +  Y + I  +P     D+Y  +YKG+ + LTIL R + G +  FGVF LY D +L  AL  A+ ++ +IP+  + +  KLA+AY+  L  LF S+   + ++    F     +L  G++  +E +  +T  ASA+D LATF+
Sbjct:  672 LKFKSSMDPLLQVFVSLESTSDATFHSDAVKYALIGLMRDLRGIAMATKSHRTYCFLFDWLYPARLPLLLKAIAYWTDTPEVTTPLLKFIAELVLNKSERLAFDSSSPNGILLFREVSKLTVAYGSRI--LPLQNAADMYTFKYKGIWICLTILTRALAGNYVNFGVFELYGDRSLADALDVALRMILSIPLADVLKFRKLAQAYFAFLEILFNSHMAFILNLDTSTFMYIVGSLEAGLKGLIENI--STQCASAVDKLATFY 930          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A4D9CV70_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV70_9STRA)

HSP 1 Score: 172 bits (435), Expect = 7.470e-45
Identity = 95/260 (36.54%), Postives = 144/260 (55.38%), Query Frame = 1
Query:   10 FDKFMDP-LRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFF 786
            F+ FM+P LR  G +  +   R +++++A   V G  RDLRGV AA Q+R+ Y  +F+ L+P  L V V A   + + P V   LLKF  E   N+  R+ F  +SP+G+LLFR  S     Y   + Q P     D+YK++YKG+A++L +L   + G +  FGVFALYED  LD AL   + L  +IP + +   PKL++AY+     LFR++   +  +   +F +   A   G+Q  +   +   AS ID LAT++
Sbjct:  743 FESFMEPILRVLGRLQETTEMRTEEAKQA---VIGVCRDLRGVTAATQNRKAYCALFELLYPQYLPVFVRAAEVWFDTPEVTTALLKFMQEFVHNKAQRLMFDQSSPNGILLFREASRVLVAYGTRVLQHPFRV--DVYKEKYKGIAISLNVLTCALSGNYVNFGVFALYEDPALDNALDVVLRLALSIPFQEILAFPKLSKAYFAFFEVLFRNHIPAVLSLSTPVFLQVIQAQHEGLQSVDPLLSAQCASTIDYLATYY 997          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A9V6D4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6D4_MONBE)

HSP 1 Score: 171 bits (434), Expect = 1.150e-44
Identity = 103/292 (35.27%), Postives = 151/292 (51.71%), Query Frame = 1
Query:    1 DVRFDKFMDPLRAAGEMVASFLDRGD--KSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFR--------------VLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYTRELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFFVRADHRKKTADMEA 828
            D RF++FM PL A G+ +A  L      ++ E   +  G+ RDLRG+V A  +R  Y ++F+ ++P  L++LV     +A    V NP+LK   EL  NR SR+ F  +SP+G+LLFR              VL      Y   + Q       D+Y+++YKG+AV   IL   + G +  FGVF+LY D  LDRAL     +L  IP+E L  +PKL++ YY LL A+ + +T     +  ++F      +  G+Q      +TH  + +D L TF V    R K  DMEA
Sbjct: 2226 DQRFEQFMAPLAAVGQQIAQQLQMNGSPRNMELRALALGFVRDLRGLVFACTTRSAYMMLFEWIYPDYLQLLVKCAGLFALDSDVANPILKCMCELVHNRNSRLQFGISSPNGILLFRETRRVACPTAPGYCVLGNMLQAYGEQLLQTSVPANGDVYREKYKGIAVCFNILRWALTGDYVNFGVFSLYGDAALDRALGIFFKMLAAIPLEDLNSYPKLSKGYYSLLQAVAKDHTHCFAQLPADLFSYVIATVADGIQSVTTTISTHCCTTLDFLITFVVTRRARSKP-DMEA 2516          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A453ER90_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ER90_AEGTS)

HSP 1 Score: 164 bits (414), Expect = 5.530e-44
Identity = 91/263 (34.60%), Postives = 147/263 (55.89%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYT--RELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFF 786
            V+F  FM+PL      + +  D   +++       G  RDLRG+  A  SRR Y L+FD L+P+R+ +L+ AI+   + P V  PLLKF +E   N+  R++F  +SP+G+LLFR +S     Y + I  +P     +IY+ +YKG+ ++LT+L+R + G +  FGVF LY D  L  AL  ++ +  +IP+  +    KL++AYY  +  LF ++     + ++    F     +L  G++  +   +T  ASAIDSLA F+
Sbjct:  113 VKFRSFMEPLLQVAVNLEASADAAFRTDVVKYAFTGLMRDLRGIAMATNSRRTYGLLFDWLYPSRMPLLLRAISLLTDEPEVTTPLLKFMSEFVLNKAQRLTFDSSSPNGILLFREISKLIVAYGSRILLLPNGT--NIYRSKYKGIWISLTVLSRALCGNYVNFGVFELYGDRALADALDISLKMTLSIPLSDILTFKKLSKAYYGYMEVLFNNHITINSVLNLDTSTFVHIVTSLESGLKGLDTGISTQCASAIDSLAAFY 373          
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Match: A0A453ER94_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ER94_AEGTS)

HSP 1 Score: 164 bits (414), Expect = 7.500e-44
Identity = 91/263 (34.60%), Postives = 147/263 (55.89%), Query Frame = 1
Query:    4 VRFDKFMDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTLVFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPTSPSGVLLFRVLSAASFKYAAAIEQVPXXXXDDIYKQRYKGVAVALTILARGIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYYHLLAALFRSYT--RELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDSLATFF 786
            V+F  FM+PL      + +  D   +++       G  RDLRG+  A  SRR Y L+FD L+P+R+ +L+ AI+   + P V  PLLKF +E   N+  R++F  +SP+G+LLFR +S     Y + I  +P     +IY+ +YKG+ ++LT+L+R + G +  FGVF LY D  L  AL  ++ +  +IP+  +    KL++AYY  +  LF ++     + ++    F     +L  G++  +   +T  ASAIDSLA F+
Sbjct:   76 VKFRSFMEPLLQVAVNLEASADAAFRTDVVKYAFTGLMRDLRGIAMATNSRRTYGLLFDWLYPSRMPLLLRAISLLTDEPEVTTPLLKFMSEFVLNKAQRLTFDSSSPNGILLFREISKLIVAYGSRILLLPNGT--NIYRSKYKGIWISLTVLSRALCGNYVNFGVFELYGDRALADALDISLKMTLSIPLSDILTFKKLSKAYYGYMEVLFNNHITINSVLNLDTSTFVHIVTSLESGLKGLDTGISTQCASAIDSLAAFY 336          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85800.20007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C3Y5_9STRA1.480e-4937.55Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3XL54_HETAK9.660e-4835.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A803LZU8_CHEQI1.550e-4636.02Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A8J4RDA3_9ROSI1.770e-4637.64Uncharacterized protein n=1 Tax=Castanea mollissim... [more]
A0A453ERC1_AEGTS4.870e-4534.60Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI0012465C8A5.360e-4537.64exportin-7-like n=2 Tax=Quercus TaxID=3511 RepID=U... [more]
A0A4D9CV70_9STRA7.470e-4536.54Importin N-terminal domain-containing protein n=3 ... [more]
A9V6D4_MONBE1.150e-4435.27Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A453ER90_AEGTS5.530e-4434.60Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453ER94_AEGTS7.500e-4434.60Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85800contigM-pyrifera_M_contig85800:5..832 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score167.5
Seed ortholog evalue8.3e-39
Seed eggNOG ortholog38833.XP_003059813.1
KEGG koko:K18460
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005049,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008536,GO:0012505,GO:0015031,GO:0015833,GO:0017016,GO:0019899,GO:0031267,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051020,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0140104,GO:0140142
EggNOG free text desc.isoform X1
EggNOG OGs34K40@3041,37PA3@33090,KOG1410@1,KOG1410@2759
COG Functional cat.UY
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size828
Cds size807
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.3185196-UTR-M-pyrifera_M_contig85800:4..251622816768.3185196-UTR-M-pyrifera_M_contig85800:4..25Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85800 5..25 +
1692278166.9956946-UTR-M-pyrifera_M_contig85800:4..251692278166.9956946-UTR-M-pyrifera_M_contig85800:4..25Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig85800 5..25 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816768.3324616-CDS-M-pyrifera_M_contig85800:25..8321622816768.3324616-CDS-M-pyrifera_M_contig85800:25..832Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85800 26..832 +
1692278167.0100057-CDS-M-pyrifera_M_contig85800:25..8321692278167.0100057-CDS-M-pyrifera_M_contig85800:25..832Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85800 26..832 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85800.20007.1prot_M-pyrifera_M_contig85800.20007.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85800 26..832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85800.20007.1

>prot_M-pyrifera_M_contig85800.20007.1 ID=prot_M-pyrifera_M_contig85800.20007.1|Name=mRNA_M-pyrifera_M_contig85800.20007.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
MDPLRAAGEMVASFLDRGDKSEEALGIVQGYARDLRGVVAAAQSRRVYTL
VFDELFPARLEVLVDAIACYAEFPLVVNPLLKFFAELATNRMSRISFPPT
SPSGVLLFRVLSAASFKYAAAIEQVPPPPPDDIYKQRYKGVAVALTILAR
GIEGGFCPFGVFALYEDDTLDRALSTAVNLLNTIPIEHLPEHPKLARAYY
HLLAALFRSYTRELCDIGPEIFFKFADALRRGVQVEELYDATHAASAIDS
LATFFVRADHRKKTADMEA
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mRNA from alignment at M-pyrifera_M_contig85800:5..832+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85800.20007.1 ID=mRNA_M-pyrifera_M_contig85800.20007.1|Name=mRNA_M-pyrifera_M_contig85800.20007.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig85800:5..832+ (Macrocystis pyrifera P11B4 male)
GATGTGCGGTTTGACAAGTTCATGGACCCGCTTCGTGCTGCCGGCGAAAT GGTGGCTTCGTTCCTGGATCGTGGGGACAAGAGTGAGGAGGCGTTGGGAA TCGTACAGGGCTATGCTCGCGATTTGCGAGGGGTTGTGGCAGCAGCACAG TCTCGTCGCGTGTACACTCTGGTGTTTGATGAGTTGTTTCCAGCTCGGCT TGAGGTGTTGGTGGATGCAATCGCATGCTACGCCGAGTTCCCGTTGGTGG TGAACCCTTTGCTCAAGTTCTTTGCAGAACTGGCAACCAACCGCATGTCT CGCATCTCCTTCCCACCAACCTCTCCTTCCGGCGTCCTTCTCTTCCGAGT GCTGTCTGCTGCATCCTTCAAGTATGCGGCTGCGATCGAGCAGGTGCCTC CTCCTCCTCCCGACGACATCTACAAGCAGCGGTACAAGGGAGTGGCTGTT GCGCTCACGATATTGGCACGAGGCATTGAGGGTGGGTTTTGCCCTTTTGG AGTGTTTGCTCTGTACGAAGACGACACTCTGGACCGAGCACTGTCGACTG CAGTCAACCTGCTCAACACGATTCCCATCGAGCACCTTCCCGAACACCCA AAACTCGCCAGAGCCTACTACCATCTCCTCGCTGCTCTCTTCCGCTCCTA CACGCGAGAGCTGTGTGACATTGGTCCCGAAATCTTCTTCAAATTTGCCG ATGCCTTGCGCAGAGGAGTGCAGGTGGAGGAGCTGTACGATGCCACCCAC GCCGCCTCAGCCATCGACTCCCTCGCCACCTTCTTCGTGCGAGCAGACCA CCGCAAGAAGACGGCAGACATGGAGGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85800:5..832+

>mRNA_M-pyrifera_M_contig85800.20007.1 ID=mRNA_M-pyrifera_M_contig85800.20007.1|Name=mRNA_M-pyrifera_M_contig85800.20007.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig85800:5..832+ (Macrocystis pyrifera P11B4 male)
ATGGACCCGCTTCGTGCTGCCGGCGAAATGGTGGCTTCGTTCCTGGATCG
TGGGGACAAGAGTGAGGAGGCGTTGGGAATCGTACAGGGCTATGCTCGCG
ATTTGCGAGGGGTTGTGGCAGCAGCACAGTCTCGTCGCGTGTACACTCTG
GTGTTTGATGAGTTGTTTCCAGCTCGGCTTGAGGTGTTGGTGGATGCAAT
CGCATGCTACGCCGAGTTCCCGTTGGTGGTGAACCCTTTGCTCAAGTTCT
TTGCAGAACTGGCAACCAACCGCATGTCTCGCATCTCCTTCCCACCAACC
TCTCCTTCCGGCGTCCTTCTCTTCCGAGTGCTGTCTGCTGCATCCTTCAA
GTATGCGGCTGCGATCGAGCAGGTGCCTCCTCCTCCTCCCGACGACATCT
ACAAGCAGCGGTACAAGGGAGTGGCTGTTGCGCTCACGATATTGGCACGA
GGCATTGAGGGTGGGTTTTGCCCTTTTGGAGTGTTTGCTCTGTACGAAGA
CGACACTCTGGACCGAGCACTGTCGACTGCAGTCAACCTGCTCAACACGA
TTCCCATCGAGCACCTTCCCGAACACCCAAAACTCGCCAGAGCCTACTAC
CATCTCCTCGCTGCTCTCTTCCGCTCCTACACGCGAGAGCTGTGTGACAT
TGGTCCCGAAATCTTCTTCAAATTTGCCGATGCCTTGCGCAGAGGAGTGC
AGGTGGAGGAGCTGTACGATGCCACCCACGCCGCCTCAGCCATCGACTCC
CTCGCCACCTTCTTCGTGCGAGCAGACCACCGCAAGAAGACGGCAGACAT
GGAGGCTATGGACCCGCTTCGTGCTGCCGGCGAAATGGTGGCTTCGTTCC
TGGATCGTGGGGACAAGAGTGAGGAGGCGTTGGGAATCGTACAGGGCTAT
GCTCGCGATTTGCGAGGGGTTGTGGCAGCAGCACAGTCTCGTCGCGTGTA
CACTCTGGTGTTTGATGAGTTGTTTCCAGCTCGGCTTGAGGTGTTGGTGG
ATGCAATCGCATGCTACGCCGAGTTCCCGTTGGTGGTGAACCCTTTGCTC
AAGTTCTTTGCAGAACTGGCAACCAACCGCATGTCTCGCATCTCCTTCCC
ACCAACCTCTCCTTCCGGCGTCCTTCTCTTCCGAGTGCTGTCTGCTGCAT
CCTTCAAGTATGCGGCTGCGATCGAGCAGGTGCCTCCTCCTCCTCCCGAC
GACATCTACAAGCAGCGGTACAAGGGAGTGGCTGTTGCGCTCACGATATT
GGCACGAGGCATTGAGGGTGGGTTTTGCCCTTTTGGAGTGTTTGCTCTGT
ACGAAGACGACACTCTGGACCGAGCACTGTCGACTGCAGTCAACCTGCTC
AACACGATTCCCATCGAGCACCTTCCCGAACACCCAAAACTCGCCAGAGC
CTACTACCATCTCCTCGCTGCTCTCTTCCGCTCCTACACGCGAGAGCTGT
GTGACATTGGTCCCGAAATCTTCTTCAAATTTGCCGATGCCTTGCGCAGA
GGAGTGCAGGTGGAGGAGCTGTACGATGCCACCCACGCCGCCTCAGCCAT
CGACTCCCTCGCCACCTTCTTCGTGCGAGCAGACCACCGCAAGAAGACGG
CAGACATGGAGGCT
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