mRNA_M-pyrifera_M_contig8575.19998.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8575.19998.1
Unique NamemRNA_M-pyrifera_M_contig8575.19998.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 2.850e-152
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRKYVA 666
            LYYDRGNHYEFSSVVRELDTAG LVGNRQYRFDFN  EKP+ESYSGLNVRLRYFVRVTISTRGKNVT+E DF+VQNIQQ+P+A DSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYR TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRKYVA
Sbjct:   77 LYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQNIQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRGTNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRKYVA 298
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA)

HSP 1 Score: 350 bits (897), Expect = 3.170e-119
Identity = 165/224 (73.66%), Postives = 199/224 (88.84%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQ-QDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRA-TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRKYVA 666
            LYYDRGNHY+FSS+VRELDTA +LVGNRQ+ FDF+ V+KP+ESYSGLNVRLRYFVRVTI+     +T++ +F VQN++ ++P  + SLKMEVGIE+CLHIEFEYDKS YHL+DV+IGKIYFLLVRIKIKHME+A++RRE AG+G+  YNESET++KYEVMDGAP KGECVPLR+FLKPY LTPTY++  NKF+V+Y+LNLVLVDEEDRRYFKQQEV LWR+ V 
Sbjct:   76 LYYDRGNHYKFSSLVRELDTANSLVGNRQFLFDFSNVDKPYESYSGLNVRLRYFVRVTITRNYGTITKDFEFAVQNVEPEEPVMNPSLKMEVGIEECLHIEFEYDKSKYHLRDVIIGKIYFLLVRIKIKHMELAVVRREAAGSGATVYNESETVVKYEVMDGAPVKGECVPLRLFLKPYDLTPTYKSINNKFSVRYYLNLVLVDEEDRRYFKQQEVVLWRRDVG 299
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: UPI0001CBA3F0 (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA3F0)

HSP 1 Score: 317 bits (813), Expect = 3.410e-106
Identity = 151/220 (68.64%), Postives = 185/220 (84.09%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            LYYDRGNH+EF+S+V+EL   G L  +  Y FDF QVEKP+ESY+G NVRLRYF+RVTI+ R  +VTRE D IV  + Q P+ ++S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET G+G N +NE+ETI KYE+MDGAP +GE +P+R+FL  Y LTPT R  NK F+V+Y+LNLVLVDEE+RRYFKQQE+TLWRK
Sbjct:   73 LYYDRGNHHEFTSLVKELARPGELTQSTTYDFDFVQVEKPYESYTGANVRLRYFLRVTIAKRLTDVTREMDIIVHTLSQYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMELAIIKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRLFLAGYDLTPTMRDINKKFSVRYYLNLVLVDEEERRYFKQQEITLWRK 292
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.630e-105
Identity = 149/226 (65.93%), Postives = 190/226 (84.07%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVG-NRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTIS-TRGKNVTRETDFIVQNIQQDPDA-SDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYR-ATNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRKYVA 666
            ++YDRGN Y+F+S+VREL+ AG + G +R Y FDF+ V+KP+ESYSG+NVRLRYFVRVTI+ + G N+ +E +F+VQ    +  A +++LKMEVGIEDCLHIEFEYDK+ YHL DV++GK++FLLVRIKIKHME+AIIRRE  GTGSNQYNE+ET+ K+E+MDGAP KGEC+P+R+FL  Y LTPTYR   N+F+V+Y+LNLVLVDEEDRRYFKQQEV  WR+ + 
Sbjct:   76 MFYDRGNSYDFTSIVRELEAAGVMEGGSRNYTFDFSTVDKPYESYSGINVRLRYFVRVTITRSYGSNIIKEEEFLVQTPSTEETAMTNTLKMEVGIEDCLHIEFEYDKNRYHLADVILGKVFFLLVRIKIKHMEVAIIRREACGTGSNQYNETETLTKFEIMDGAPVKGECIPVRLFLSQYNLTPTYRNVNNRFSVRYYLNLVLVDEEDRRYFKQQEVIFWRQELG 301
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: UPI00188555CB (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188555CB)

HSP 1 Score: 315 bits (808), Expect = 1.380e-104
Identity = 151/220 (68.64%), Postives = 181/220 (82.27%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            +YYDRGNH+EF S+V+EL   G L  N  Y FDFNQVEKP+ESY+G NVRLRYF+RVTI  R  ++ RE D  V  + Q PD + S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AI++RET G+G N +NE+ETI KYE+MDGAP +GE +P+RVFL  Y LTPT R  NK F+V+Y+LNLVLVDEEDRRYFKQQE+TLWRK
Sbjct:   76 MYYDRGNHHEFLSLVKELARPGELQQNVSYPFDFNQVEKPYESYTGSNVRLRYFLRVTIVRRLSDLVREMDIAVHTLSQYPDMNTSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEVAIMKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYYLNLVLVDEEDRRYFKQQEITLWRK 295
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: A0A0N7ZCR9_SCYOL (Uncharacterized protein n=4 Tax=Portunidae TaxID=6757 RepID=A0A0N7ZCR9_SCYOL)

HSP 1 Score: 317 bits (813), Expect = 1.400e-104
Identity = 150/220 (68.18%), Postives = 183/220 (83.18%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            LYYDRGNH+EF+S+V+EL   G L  N  + F+FNQVEKP+ESYSG NVRLRYF+RVTI  R  ++TRE D +V  +   P+ ++S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET G+G N +NE+ETI KYE+MDGAP +GE +P+RVFL  Y LTPT R  NK F+V+Y LNLVLVDEE+RRYFKQQE+TLWRK
Sbjct:   53 LYYDRGNHHEFTSLVKELARPGELTHNTSFEFEFNQVEKPYESYSGTNVRLRYFLRVTIVRRLSDITREMDLLVHTLSSYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIAIIKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYHLNLVLVDEEERRYFKQQEITLWRK 272
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BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: A0A6A4W6K8_AMPAM (Vacuolar protein sorting-associated protein 26B-like n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W6K8_AMPAM)

HSP 1 Score: 317 bits (813), Expect = 4.570e-104
Identity = 152/220 (69.09%), Postives = 181/220 (82.27%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            +YYDRGNH+EF S+V+EL   G L  N  Y FDFNQVEKP+ESY+G NVRLRYF+RVTI  R  ++ RE D  V  + Q PD + S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AII+RET G+G N +NE+ETI KYE+MDGAP +GE +P+RVFL  Y LTPT R  NK F+V+Y+LNLVLVDEEDRRYFKQQE+TLWRK
Sbjct:   76 MYYDRGNHHEFLSLVKELARPGELQQNASYPFDFNQVEKPYESYTGSNVRLRYFLRVTIVRRLSDLVREMDIAVHTLSQYPDMNTSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEVAIIKRETTGSGPNTFNENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYYLNLVLVDEEDRRYFKQQEITLWRK 295
[Close]
BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: UPI001B88904D (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88904D)

HSP 1 Score: 312 bits (800), Expect = 7.070e-104
Identity = 147/220 (66.82%), Postives = 182/220 (82.73%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            LYYDRGNH+EF+S+V+EL   G L  N  Y F+F QVEKP+ESY+G NVRLRYF+RVTI  R  +V +E D +V  + Q PD ++S+KMEVGIEDCLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+ II+RET GTG N +NE+ETI KYE+MDGAP +GE +P+R+FL  Y LTPT R  NK F+V+Y+LNLVLVDEE+RRYFKQQE+T++RK
Sbjct:   76 LYYDRGNHHEFTSLVKELARPGELTQNASYNFEFQQVEKPYESYTGANVRLRYFLRVTIVKRLTDVVKEQDIVVHTLSQYPDMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEVQIIKRETTGTGPNTFNENETIAKYEIMDGAPVRGESIPIRLFLSGYELTPTMRDINKKFSVRYYLNLVLVDEEERRYFKQQEITIFRK 295
[Close]
BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: A0A6S8R4Z0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8R4Z0_9STRA)

HSP 1 Score: 310 bits (795), Expect = 9.160e-104
Identity = 148/221 (66.97%), Postives = 186/221 (84.16%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRG--KNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRA-TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWR 654
            L++DRG +Y+F+ V+RELD  G L+G ++Y FD +  EKP+ESY+GLNVRLRYFVRVT+ TRG   ++ +E +FIVQ  Q  P+ +  +KMEVGIE+CLHIEFEYDKS YHL DVV+GK+YFLLVRIKIKHME+A+IRRE AG G NQ+NESETI KYEVMDGAP +GECVP+R+FL+ + LTPTYR   NKF+V+Y+LNLVLVD+E+RRYFKQQE+TL+R
Sbjct:   74 LFHDRGTYYDFTCVLRELDVPGVLMGQQRYAFDLSHAEKPYESYNGLNVRLRYFVRVTV-TRGYASSLIKEQEFIVQVSQPAPETNTPVKMEVGIEECLHIEFEYDKSKYHLADVVVGKVYFLLVRIKIKHMELAVIRREAAGAGPNQHNESETITKYEVMDGAPVRGECVPIRLFLRNFNLTPTYRGINNKFSVRYYLNLVLVDQEERRYFKQQEITLYR 293
[Close]
BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Match: UPI001ED892AD (vacuolar protein sorting-associated protein 26B-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED892AD)

HSP 1 Score: 313 bits (802), Expect = 1.700e-103
Identity = 151/220 (68.64%), Postives = 180/220 (81.82%), Query Frame = 1 
Query:    1 LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVRLRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNK-FTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 657
            LYYDRGNH+EF+S+V+EL   G L  +  Y F+F  VEKPFESY+G NVRLRYF+RVTI  R  +V RE D IV  +   PD ++S+KMEVGIE+CLHIEFEY+KS YHL+DV++GKIYFLLVRIKIKHME+AIIRRET G+G N Y E+ETI KYE+MDGAP +GE +P+RVFL  Y LTPT R  NK F+V+YFLNLVL+DEEDRRYFKQQE+TLWRK
Sbjct:   76 LYYDRGNHHEFTSLVKELARPGELSNHVSYPFEFLNVEKPFESYTGSNVRLRYFLRVTIVRRISDVVREVDLIVHTLSSYPDMNNSIKMEVGIEECLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIAIIRRETTGSGPNMYTENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYFLNLVLMDEEDRRYFKQQEITLWRK 295
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8575.19998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS34_ECTSI2.850e-15295.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CB39_9STRA3.170e-11973.66Vacuolar protein sorting-associated protein 26-dom... [more]
UPI0001CBA3F03.410e-10668.64vacuolar protein sorting-associated protein 26B-li... [more]
A0A7S2UYV3_9STRA1.630e-10565.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI00188555CB1.380e-10468.64vacuolar protein sorting-associated protein 26B-li... [more]
A0A0N7ZCR9_SCYOL1.400e-10468.18Uncharacterized protein n=4 Tax=Portunidae TaxID=6... [more]
A0A6A4W6K8_AMPAM4.570e-10469.09Vacuolar protein sorting-associated protein 26B-li... [more]
UPI001B88904D7.070e-10466.82vacuolar protein sorting-associated protein 26B-li... [more]
A0A6S8R4Z0_9STRA9.160e-10466.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI001ED892AD1.700e-10368.64vacuolar protein sorting-associated protein 26B-li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8575contigM-pyrifera_M_contig8575:4236..7801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.8
Seed ortholog evalue2e-118
Seed eggNOG ortholog2880.D8LS34
Preferred nameVPS26B
KEGG rclassRC00055,RC00523
KEGG koko:K01876,ko:K18466
KEGG ReactionR05577
KEGG Pathwayko00970,ko04144,map00970,map04144
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0008104,GO:0008150,GO:0008565,GO:0009894,GO:0009966,GO:0009987,GO:0010008,GO:0010033,GO:0010506,GO:0010646,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016055,GO:0016192,GO:0016197,GO:0016241,GO:0016482,GO:0016787,GO:0019222,GO:0023051,GO:0023052,GO:0030111,GO:0030139,GO:0030904,GO:0030906,GO:0031090,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034097,GO:0034341,GO:0034613,GO:0042147,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045087,GO:0045184,GO:0045185,GO:0045335,GO:0046907,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0051716,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071702,GO:0071705,GO:0097422,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:0098876,GO:0198738,GO:1905114,GO:1990126
EggNOG free text desc.retrograde transport, endosome to Golgi
EggNOG OGsKOG3063@1,KOG3063@2759
EC6.1.1.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko04131
Exons6
Model size669
Cds size669
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8575.19998.1prot_M-pyrifera_M_contig8575.19998.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8575 4236..7801 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816767.8189046-CDS-M-pyrifera_M_contig8575:4235..42841622816767.8189046-CDS-M-pyrifera_M_contig8575:4235..4284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 4236..4284 -
1692278166.6642814-CDS-M-pyrifera_M_contig8575:4235..42841692278166.6642814-CDS-M-pyrifera_M_contig8575:4235..4284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 4236..4284 -
1622816767.8315551-CDS-M-pyrifera_M_contig8575:5118..52421622816767.8315551-CDS-M-pyrifera_M_contig8575:5118..5242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 5119..5242 -
1692278166.6821382-CDS-M-pyrifera_M_contig8575:5118..52421692278166.6821382-CDS-M-pyrifera_M_contig8575:5118..5242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 5119..5242 -
1622816767.8468282-CDS-M-pyrifera_M_contig8575:5706..58511622816767.8468282-CDS-M-pyrifera_M_contig8575:5706..5851Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 5707..5851 -
1692278166.6925836-CDS-M-pyrifera_M_contig8575:5706..58511692278166.6925836-CDS-M-pyrifera_M_contig8575:5706..5851Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 5707..5851 -
1622816767.8595705-CDS-M-pyrifera_M_contig8575:6125..62391622816767.8595705-CDS-M-pyrifera_M_contig8575:6125..6239Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 6126..6239 -
1692278166.7100303-CDS-M-pyrifera_M_contig8575:6125..62391692278166.7100303-CDS-M-pyrifera_M_contig8575:6125..6239Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 6126..6239 -
1622816767.8713725-CDS-M-pyrifera_M_contig8575:6641..67941622816767.8713725-CDS-M-pyrifera_M_contig8575:6641..6794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 6642..6794 -
1692278166.7260628-CDS-M-pyrifera_M_contig8575:6641..67941692278166.7260628-CDS-M-pyrifera_M_contig8575:6641..6794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 6642..6794 -
1622816767.881804-CDS-M-pyrifera_M_contig8575:7717..78011622816767.881804-CDS-M-pyrifera_M_contig8575:7717..7801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 7718..7801 -
1692278166.737376-CDS-M-pyrifera_M_contig8575:7717..78011692278166.737376-CDS-M-pyrifera_M_contig8575:7717..7801Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8575 7718..7801 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8575.19998.1

>prot_M-pyrifera_M_contig8575.19998.1 ID=prot_M-pyrifera_M_contig8575.19998.1|Name=mRNA_M-pyrifera_M_contig8575.19998.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
LYYDRGNHYEFSSVVRELDTAGTLVGNRQYRFDFNQVEKPFESYSGLNVR
LRYFVRVTISTRGKNVTRETDFIVQNIQQDPDASDSLKMEVGIEDCLHIE
FEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNES
ETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRATNKFTVKYFLNLVL
VDEEDRRYFKQQEVTLWRKYVA*
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mRNA from alignment at M-pyrifera_M_contig8575:4236..7801-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8575.19998.1 ID=mRNA_M-pyrifera_M_contig8575.19998.1|Name=mRNA_M-pyrifera_M_contig8575.19998.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3566bp|location=Sequence derived from alignment at M-pyrifera_M_contig8575:4236..7801- (Macrocystis pyrifera P11B4 male)
CTGTACTACGACCGCGGCAACCACTATGAGTTTTCCTCGGTCGTTCGGGA
GCTGGACACCGCGGGAACGCTTGTCGGGAACCGAGTGAGTACCCCCCCCT
CATCCCCTCGCTCATCCCACGCGTTTTAGGTCAATAGGTATCGCCACGCG
CCGTGTATCATACCTGGTATACCGGTGTGTAGAGAGCGTTTCTCAGTTCT
TAGTAGGATGCAGGTCACTTTTCATGCGACTCGCCCAACACCTCACAGCC
CTTCGCGCTTGGCGCAAGCAAGCAATGCTTGCCTGGTCCGTGAAAACCTG
ACGTGCTTCGTCCCGTCATTTATAGGGATGCGAGGGTCTATGGTCATGCG
ACTACAGCCATGCACGATAATGAGTACACCCCAAGCCGCGTGAACGGCCA
TGCAGGCATGCTCGAGTTGGATGGAAGGCCGTGCGCGCGGTGTCGCGGTG
TTGGTTCTTGTTTGCTTTGTTCTTTGGTTTATCCGGCGTCCACTGGTCAC
TGTGCTGTTTGTGTTGGTTTTGTTTTTGCGTGGGCGGCCCTACCAACTAC
CGCGAAAAGTATAAGATGGTATTGTTGAGGGGGTATTTAGCTCTCTCTAT
TAGTTACGGGGGGGCATAGTATTACTTACCTGGTACAATTTTGGTAAGCA
AAACCGGCGATGGGACCCCAAAACCGTGTATCCCCTTATGTTTTTGCCTA
CGTACCGCATTTGGCTCTGATTACTCTGTTCCCTCGCAAATAGCAACTCG
CTCTAACAGGGGGTATATGTATCCTTTTCCGACGATGGACACTGCTGGAA
GGCAGACAATAGTTTATGGTTTTGGTTTGTGCGCTGCTGCCCTGGGCTGC
CCTGTCCTACCCTACACTGCCCTTGGCGCTGTCCTGTGCTGTCTGGTCCT
GTCCTGCCTGGTCCTGTCCTGCCCTGTCCTCATGGCTGTTTTCGCGTTGT
GGCCTCTAATGCTCGGGCCGCTCTTGCCTATGTGTGTGTTTTGACTTGTT
TCCGCAGCAATATCGGTTCGACTTCAACCAAGTCGAGAAGCCGTTCGAGT
CGTACAGCGGCCTCAACGTACGACTTCGATACTTCGTACGAGTGACGATT
TCCACCAGAGGCAAAAACGTCACGAGAGAGACGGACTTCATCGTGCAGAA
CATACAGCAGGTATGTGCCGGTTCGAATGTTGTGTTCTGTTATTTGGGTT
GGGTTGGATTATGTTGGGTTGGGTTCTCTTCTGTTAGGTTATGTTCGATT
CGGTTTGGTCAGGTGTTGTTCGGTTGTGTTTGGTTCGGTTGGGTTGGGTT
GGGTTCGGATCGAACCATGCAGTTCATCAACGTAAACTCTAGTAAGCGCT
TGTGATACTGCTGCAGTCTTCTCAGGCCGACGTGCTGGTCGACCGGTCGA
GCACTAAAACCGTCGCGCTGTGCGATCTCTTGTTTCCTTGTCTTAAAGCC
TTCGCTCATTGTTGTGCGCGCCGTCAGAGGGTGTGGCATGGCGTTCATGG
TGGATCAATGAATCACGGCCGTCGTATTGTATTATACCCGCGTCTTGTTC
TGCCGTGCCCAGGATCCGGACGCTTCGGATTCCCTGAAGATGGAGGTGGG
CATCGAAGACTGCCTTCACATCGAGTTCGAGTACGACAAATCGGCGTACC
ACTTGCAGGACGTGGTCATCGGAAAGGTGTGTACTTCGAAGTATATAGCC
AGCGCGATTGAGCAAAAGCCCACCACCCGTGAGCCGACACCCCGCCGCTC
ACGTAGAGACGAGTGCACCTCCGCCGCCTCTCCTCCCCCCCTCCCAAAGC
GTCGCGCTTGTAATGGATCTTGGTATTATTAACCTCCGCACACACACGCC
GGCAAAAAATGGAACTCCTATCACCGCAAAAATTGAACTCCTTTCACCGC
AAACAGTCGAACTCCGCTTCAATACCATAAATGGAACTCCCTGGTTACAG
ATTTACTTCCTGTTGGTGAGAATCAAGATCAAGCACATGGAGATGGCGAT
AATCCGAAGAGAAACGGCCGGCACGGGGTCCAACCAATACAACGAAAGCG
AGACGATCATCAAGTACGAGGTCATGGACGGGGCGCCGGCTAAGGGTAAG
CAAGACGTGCACGTGCAGCTGCTGTCCACGCTGTCCACACCCGTGTGTTC
GTTGGTCGCCCGGTCGTCTTGCGTACCCCGGCAGCAACTGCGAGACAACT
GTCACGACGATGGCAGCACGGTCTATATATGTACCAAGGTAGTGTTGTTT
ATTTTTAGTATTTCGAGTGAAAACAGGGAGGCGCTCCCTTGTCGCCTGTC
GTCGGAATCATGGACTCTTCGAGCTGAAAACCGGCGCAATGGTCTTGACA
CCAGCGTCACTACTATTGTAGCAGTAATTAAATAGTAGCAGTAGAAGTAG
TGGTTTAGTAGTAGTCGTAGAGGTACCTGTGTAGTATGTTATTAGTGGTG
GTACCTGGTACGATATTAGCAGTGGCAGTAGTAGACATTGCCACTCGTGT
CGCCTCTTGTTGGCTAGCCTCAAGAGACGCGGCACCCGCCCTCTCTTTGC
ATATCACAGGGGAGTGCGTGCCGCTGCGGGTGTTCCTCAAGCCGTACGCG
CTGACGCCGACGTACCGAGCGACCAACAAGTTCACCGTCAAGTACTTCCT
CAACCTCGTCCTGGTCGACGAGGAAGACCGCAGGTGCCGCGTTACGCTTG
TTTTAAGTTGTGTGCGTTTTGGCGTTTCTAGACAAGGGTGGGGGGGGGCA
GGTCGGCGAGGAGAGGAGGGACAGGTAAGTGTTTAGTGTGTGTATGCTCT
TTTCTTAGTTTCTGGAGATGGGGGGGCAGGCAATTTTCGTGTGTGTGCTT
GTTTTTGCGTTCCCGGAGGATGGGAAGGGGGGCGGGCAAGGAGCCTTGCA
CACCGCATGGGACGCACGTGGATGCCCGTTCGTTGTAGCGGGCTGTGTAC
GGCTCGACGCTATTGGCGTCCTGTGTGCCGCCCAGGTTGGTTAACCACTT
GAGCCGAGAATGTGAACCAACACGCCTCATTATCCCTTTGGCAACAAACC
ACGGATTATTCTCGTACCCCCCCCCTCCTCGCCTATCGCACTGCCCACAC
AAAGCCAAAACACGAAAAGGCCAGGTGAAGCTCCCGCTCCCGATGGTAGA
CAACTGACGACACACGACCCCGTTAAGAAGGCCCCGACAACAACTTCCAA
CCTTTTAGCCCAGTTGAAGCAGCCATGTATGCCCTCGCTCCCGGTAATTG
GTGCCTCATAATTGCCGCATCGAGACATTTGCGAAAGAAAAAACTCACCC
TTGAAGAACTCCACCCGTGTTTTTACGCATAAACTACTTGGAAGTTGACA
GTTATATTGTGCAGCAGTAGAAGGGTCAAGGAGATGGTAAATAGAGATCA
GGAACCGAACCAGAAGCTGTTTCACGTTGTTGGCTTTCGTTGCCTCCCCT
CAGCCCCCCCCCCCCTGGCCCCCCTGCCGCCCCTCCCGCGGTGGGTACGT
TTTTTTTCTTGTCGCAGGTATTTCAAGCAGCAAGAGGTTACGCTATGGCG
CAAATATGTCGCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8575:4236..7801-

>mRNA_M-pyrifera_M_contig8575.19998.1 ID=mRNA_M-pyrifera_M_contig8575.19998.1|Name=mRNA_M-pyrifera_M_contig8575.19998.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig8575:4236..7801- (Macrocystis pyrifera P11B4 male)
CTGTACTACGACCGCGGCAACCACTATGAGTTTTCCTCGGTCGTTCGGGA
GCTGGACACCGCGGGAACGCTTGTCGGGAACCGACTGTACTACGACCGCG
GCAACCACTATGAGTTTTCCTCGGTCGTTCGGGAGCTGGACACCGCGGGA
ACGCTTGTCGGGAACCGACAATATCGGTTCGACTTCAACCAAGTCGAGAA
GCCGTTCGAGTCGTACAGCGGCCTCAACGTACGACTTCGATACTTCGTAC
GAGTGACGATTTCCACCAGAGGCAAAAACGTCACGAGAGAGACGGACTTC
ATCGTGCAGAACATACAGCAGCAATATCGGTTCGACTTCAACCAAGTCGA
GAAGCCGTTCGAGTCGTACAGCGGCCTCAACGTACGACTTCGATACTTCG
TACGAGTGACGATTTCCACCAGAGGCAAAAACGTCACGAGAGAGACGGAC
TTCATCGTGCAGAACATACAGCAGGATCCGGACGCTTCGGATTCCCTGAA
GATGGAGGTGGGCATCGAAGACTGCCTTCACATCGAGTTCGAGTACGACA
AATCGGCGTACCACTTGCAGGACGTGGTCATCGGAAAGGATCCGGACGCT
TCGGATTCCCTGAAGATGGAGGTGGGCATCGAAGACTGCCTTCACATCGA
GTTCGAGTACGACAAATCGGCGTACCACTTGCAGGACGTGGTCATCGGAA
AGATTTACTTCCTGTTGGTGAGAATCAAGATCAAGCACATGGAGATGGCG
ATAATCCGAAGAGAAACGGCCGGCACGGGGTCCAACCAATACAACGAAAG
CGAGACGATCATCAAGTACGAGGTCATGGACGGGGCGCCGGCTAAGGATT
TACTTCCTGTTGGTGAGAATCAAGATCAAGCACATGGAGATGGCGATAAT
CCGAAGAGAAACGGCCGGCACGGGGTCCAACCAATACAACGAAAGCGAGA
CGATCATCAAGTACGAGGTCATGGACGGGGCGCCGGCTAAGGGGGAGTGC
GTGCCGCTGCGGGTGTTCCTCAAGCCGTACGCGCTGACGCCGACGTACCG
AGCGACCAACAAGTTCACCGTCAAGTACTTCCTCAACCTCGTCCTGGTCG
ACGAGGAAGACCGCAGGGGAGTGCGTGCCGCTGCGGGTGTTCCTCAAGCC
GTACGCGCTGACGCCGACGTACCGAGCGACCAACAAGTTCACCGTCAAGT
ACTTCCTCAACCTCGTCCTGGTCGACGAGGAAGACCGCAGGTATTTCAAG
CAGCAAGAGGTTACGCTATGGCGCAAATATGTCGCGTGAGTATTTCAAGC
AGCAAGAGGTTACGCTATGGCGCAAATATGTCGCGTGA
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