mRNA_M-pyrifera_M_contig85742.19991.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A8B7ZX78_ACAPL (chloride channel protein 2-like isoform X1 n=5 Tax=Valvatida TaxID=41166 RepID=A0A8B7ZX78_ACAPL) HSP 1 Score: 97.1 bits (240), Expect = 7.340e-21 Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 ++FL +LG I+A++ AMD A AK Q Q++ F L + W G+S+ L + S+ H S A GSGIP+++ IL G L YLS R L +KV+G+ A+LG+GL +GKEGPFVH+ASI++T L+ L+ Sbjct: 80 WIFLALLGIIMALLSFAMDYAIAKCQTAQVQLFMLLKGLPVLQYFGWVGFSIILIIFSSVFVHLVSPNAIGSGIPEMKTILRGVVLKEYLSFRTLISKVIGVAASLGSGLPIGKEGPFVHIASIVSTMLSKLI 212
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2H2IFV9_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IFV9_CAEJA) HSP 1 Score: 95.9 bits (237), Expect = 1.750e-20 Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 ++FL +LG I+A + MD A LQ Q++ F L ++ F L W G+ +AL L SA H+ + +A GSGIP+++ IL G L YLSLR L +K++GL +LG+GL +GKEGPFVHVAS++A+QL+ LV Sbjct: 52 WIFLALLGFIMAALSFGMDYAILNLQNGQMQLFDLVKTYHFTLALLVWVGYVVALILFSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSLRTLVSKMIGLTFSLGSGLPMGKEGPFVHVASVVASQLSRLV 185
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2G9V5M5_TELCI (Chloride channel protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9V5M5_TELCI) HSP 1 Score: 95.5 bits (236), Expect = 2.490e-20 Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQQ-----IRHFLAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQL 378 +VFL +LG I+A+ + MD +KLQ+ RHF + F WT + + L SA H+ + +A GSGIP+++ +L G L YLS+R L +K++GL +LG+GL +GKEGPFVH+AS++A QL Sbjct: 108 WVFLALLGLIMAMFSLGMDIMISKLQEGHMAFYRHFKSDPIWVVSFFVWTLYVVILICASALCAHYIAPQAIGSGIPEMKTVLRGVILKEYLSVRTLISKMIGLTLSLGSGLPIGKEGPFVHIASVVANQL 238
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A7R9BZS0_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BZS0_9CRUS) HSP 1 Score: 94.4 bits (233), Expect = 2.560e-20 Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQQIRHFLAP---SFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 +VFL VLG I+AV+ ++ + R +L S F+AW + L L L S H SR+A GSGIP+++ IL G L YL+ R L AKV+GL A LGAG+ +GKEGPFVH+ASI+AT L LV Sbjct: 68 WVFLAVLGLIMAVISFCVEYLVGLCNKARLWLYKDLVSHPVLQFMAWVSFPLFLILFSVGFTHIVSRQASGSGIPEMKTILRGVALKEYLTFRTLVAKVVGLTATLGAGMPLGKEGPFVHIASIVATLLGKLV 200
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A0G4F9C3_VITBC (Chloride channel protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F9C3_VITBC) HSP 1 Score: 95.1 bits (235), Expect = 3.500e-20 Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 19 LGAIVAVVGMAMDAAAAKLQQIRHFLAPSFTFADF-----LAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAAL 387 LG + A++ AMD + L ++RH+L + T AD + GWSL + + H + +A GSGIP+L+ IL+G LP YLSLR K LGL AAL GL VGKEGPFVH+A+I+A QLA L Sbjct: 86 LGVLTALISWAMDMSIDLLLELRHWLCGTQTGADSPILSAVTLAGWSLGASAVAVFCCHVIAPEAMGSGIPELKTILSGVLLPRYLSLRAFVGKTLGLTAALAGGLSVGKEGPFVHIAAIIANQLAKL 213
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: Q9BMK9-2 (Isoform b of Chloride channel protein clh-3 n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=Q9BMK9-2) HSP 1 Score: 94.7 bits (234), Expect = 4.700e-20 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 ++FL +LG I+A + MD A LQ Q+R F L + F +L W G+ + L L SA H+ + +A GSGIP+++ IL G L YLS+R L +K++GL +LG+GL +GKEGPFVHVAS++A+QL LV Sbjct: 123 WIFLALLGFIMASLSFGMDYAILNLQNGQMRLFDLVKEYHFTLAYLVWVGYVVGLILLSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSLGSGLPMGKEGPFVHVASVVASQLTRLV 256
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A0A2B4SA43_STYPI (Chloride channel protein 2 n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SA43_STYPI) HSP 1 Score: 94.7 bits (234), Expect = 4.720e-20 Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHFLAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 +VFL+ LG ++A++ +D A K Q I F PS TF ++ WT + L L S H S A GSGIP+++ IL GT + YLSLR L AKV+GL+ ALG+ + +GKEGPFVH+AS++A + V Sbjct: 82 WVFLLFLGIVMALISFVLDLAIDKCQTAHIWLFNLPSNTFLQYIVWTSFPLCLVTFSVGFTHLVSPHAIGSGIPEMKVILRGTVMKRYLSLRTLIAKVVGLLTALGSSIPIGKEGPFVHIASMVARSMGKFV 213
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: UPI001454F829 (chloride channel protein 2-like isoform X1 n=4 Tax=Asteroidea TaxID=7588 RepID=UPI001454F829) HSP 1 Score: 94.7 bits (234), Expect = 4.730e-20 Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHFLA-PSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 ++FL +LG I+A++ AMD A AK Q Q++ +L +LAWTG+ +A + S H S A GSGIP+++ IL G L YLS R L +KV+G+ +LG+GL +GKEGPFVH+ASI++T L+ L+ Sbjct: 80 WIFLALLGIIMALLSFAMDYAIAKFQTAQVQLYLVMKGQPVLQYLAWTGFPVAFIIFSTGFVHLVSPNAIGSGIPEMKTILRGVVLKEYLSFRTLVSKVVGVATSLGSGLPIGKEGPFVHIASIVSTILSKLI 212
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: CLH3_CAEEL (Chloride channel protein clh-3 n=8 Tax=Caenorhabditis elegans TaxID=6239 RepID=CLH3_CAEEL) HSP 1 Score: 94.7 bits (234), Expect = 4.780e-20 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 1 FVFLVVLGAIVAVVGMAMDAAAAKLQ--QIRHF-LAPSFTFA-DFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQLAALV 390 ++FL +LG I+A + MD A LQ Q+R F L + F +L W G+ + L L SA H+ + +A GSGIP+++ IL G L YLS+R L +K++GL +LG+GL +GKEGPFVHVAS++A+QL LV Sbjct: 52 WIFLALLGFIMASLSFGMDYAILNLQNGQMRLFDLVKEYHFTLAYLVWVGYVVGLILLSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSLGSGLPMGKEGPFVHVASVVASQLTRLV 185
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Match: A9V6T5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6T5_MONBE) HSP 1 Score: 94.7 bits (234), Expect = 4.790e-20 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 19 LGAIVAVVGMAMDAAAAKLQQIRHF----LAPSFTFADFLAWTGWSLALALCSATAGHWGSRKAEGSGIPQLQAILAGTELPGYLSLRVLAAKVLGLVAALGAGLRVGKEGPFVHVASILATQL 378 LG +A++G +D A + L +R + PS+ F +AW+ +++ + + HW S A GSGIPQ++ IL GT + GYLS R LAAK++GL+ A G+GL VGKEGPFVH+ASI+ QL Sbjct: 321 LGVSIALIGFCLDFAISALHHLRDLATSGIHPSYMF---VAWSAFTVTCVIMATATTHWLSADAIGSGIPQMKTILQGTPIEGYLSGRTLAAKIVGLIFAEGSGLPVGKEGPFVHMASIVQEQL 441 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85742.19991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85742.19991.1 >prot_M-pyrifera_M_contig85742.19991.1 ID=prot_M-pyrifera_M_contig85742.19991.1|Name=mRNA_M-pyrifera_M_contig85742.19991.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp FVFLVVLGAIVAVVGMAMDAAAAKLQQIRHFLAPSFTFADFLAWTGWSLAback to top mRNA from alignment at M-pyrifera_M_contig85742:7..396- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85742.19991.1 ID=mRNA_M-pyrifera_M_contig85742.19991.1|Name=mRNA_M-pyrifera_M_contig85742.19991.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig85742:7..396- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85742:7..396- >mRNA_M-pyrifera_M_contig85742.19991.1 ID=mRNA_M-pyrifera_M_contig85742.19991.1|Name=mRNA_M-pyrifera_M_contig85742.19991.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig85742:7..396- (Macrocystis pyrifera P11B4 male)back to top |